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Cross validate RNA-seq and ATAC-seq
DAR cross-validation DEG ATAC-seq RNA-seq
updated 13 months ago by 86k • written 13 months ago by ▴ 10
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1
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6.1k
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Comment: Comment: Which method is the best for using in "dba.count" in Diffbind R package
13 months ago by Wang Cong ▴ 10
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3
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973
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How to make barplots for multi sample gene ontology analysis
enrichment-analysis GO
updated 19 months ago by ▴ 10 • written 19 months ago by ▴ 10
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1
reply
606
views
More than one proteins in one row in mass spectrometry data
proteomics mass_spectrometry
updated 20 months ago by 86k • written 20 months ago by ▴ 10
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1
reply
592
views
How to extract proteins from PCs in plot_pca in DEP package?
DEP PCA Proteomics
updated 21 months ago by 86k • written 21 months ago by ▴ 10
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1
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440
views
How to compare RNA expression correlation?
RNA-seq cancer-cell-line correlation
21 months ago by Wang Cong ▴ 10
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0
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518
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How to investigate correlation between transcript and protein abundance?
regulation data-mining gene correlation
21 months ago by Wang Cong ▴ 10
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1
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2.1k
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Comment: Comment: Unable to install clusterProfiler on Mac M1
22 months ago by Wang Cong ▴ 10
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1
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2.1k
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Comment: Comment: Unable to install clusterProfiler on Mac M1
22 months ago by Wang Cong ▴ 10
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5
replies
2.1k
views
Unable to install clusterProfiler on Mac M1
install M1 Mac clusterProfiler
updated 22 months ago by 148k • written 22 months ago by ▴ 10
1
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0
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399
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GSEA: different species in gene set and RNA-seq data
RNA-seq GSEA
23 months ago by Wang Cong ▴ 10
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4
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1.7k
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Extract paired-end reads with one end falls within a given region from a bam file
samtools
updated 18 months ago by 44k • written 2.3 years ago by ▴ 10
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173k
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Comment: Comment: Extract Reads From A Bam File That Fall Within A Given Region
2.3 years ago by Wang Cong ▴ 10
1
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3
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928
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Problem with extracting reverse-reverse read pairs
samtools bam alignment
updated 18 months ago by 44k • written 2.3 years ago by ▴ 10
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0
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1.3k
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Comment: Comment: How to extra read pair orientation from paired end reads
2.3 years ago by Wang Cong ▴ 10
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1
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1.3k
views
Comment: Comment: How to extra read pair orientation from paired end reads
updated 2.3 years ago by 164k • written 2.3 years ago by ▴ 10
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1
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1.3k
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Comment: Comment: How to extra read pair orientation from paired end reads
2.3 years ago by Wang Cong ▴ 10
1
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6
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1.3k
views
How to extra read pair orientation from paired end reads
hi-c alignment samtools
2.3 years ago by Wang Cong ▴ 10
0
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1
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900
views
Comment: Comment: 3 reads with the same ID in sam file
2.5 years ago by Wang Cong ▴ 10
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0
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1.8k
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Comment: Comment: what is bam format file flag 0x2 mean?
2.5 years ago by Wang Cong ▴ 10
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1
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700
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Comment: Comment: Will flags in sam files be updated after filtering?
2.5 years ago by Wang Cong ▴ 10
2
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3
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700
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Will flags in sam files be updated after filtering?
sam alignment samtools
2.5 years ago by Wang Cong ▴ 10
3
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4
replies
900
views
3 reads with the same ID in sam file
sam alignment samtools
updated 2.5 years ago by 164k • written 2.5 years ago by ▴ 10
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