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Showing :
questions
6
votes
11
replies
1.7k
views
Calculate RPKM
RPKM
14 months ago by
Chris
▴ 280
0
votes
0
replies
390
views
ATAC seq fragment file
ATAC-seq
updated 14 months ago by
Ram
43k • written 14 months ago by
Chris
▴ 280
6
votes
13
replies
1.6k
views
Error with STAR
STAR
updated 14 months ago by
Ram
43k • written 14 months ago by
Chris
▴ 280
1
vote
2
replies
511
views
Filter out pct.2 <0.5
findallmarker
updated 14 months ago by
Ram
43k • written 14 months ago by
Chris
▴ 280
0
votes
0
replies
306
views
FindConservedMarkers genes order
FindConservedMarkers
14 months ago by
Chris
▴ 280
2
votes
3
replies
632
views
Error when performing integration to correct for batch effects
integration
14 months ago by
Chris
▴ 280
5
votes
12
replies
1.4k
views
Data from an experiment
single-cell
updated 15 months ago by
GenoMax
142k • written 15 months ago by
Chris
▴ 280
0
votes
0
replies
326
views
Error with FindConservedMarkers()
FindConservedMarkers
15 months ago by
Chris
▴ 280
3
votes
10
replies
2.1k
views
Error with FindConservedMarkers()
FindConservedMarkers
15 months ago by
Chris
▴ 280
1
vote
2
replies
524
views
Can't view the last rows
scRNA-Seq
updated 15 months ago by
brunobsouzaa
▴ 830 • written 15 months ago by
Chris
▴ 280
3
votes
5
replies
731
views
Size of two scRNA-Seq conditions
scRNA-Seq
15 months ago by
Chris
▴ 280
3
votes
6
replies
1.2k
views
Which file and data structure is used to create volcano plot from scRNA-Seq experiment?
plot
Volcano
15 months ago by
Chris
▴ 280
5
votes
7
replies
1.0k
views
Error with docker
docker
updated 18 months ago by
M__
▴ 200 • written 18 months ago by
Chris
▴ 280
2
votes
2
replies
1.5k
views
Error when add nextflow to PATH variable
nextflow
18 months ago by
Chris
▴ 280
0
votes
0
replies
457
views
Concat 2 samples in Scanpy
scanpy
19 months ago by
Chris
▴ 280
0
votes
0
replies
1.1k
views
How to fix ModuleNotFoundError: No module named 'kneed'?
kneed
19 months ago by
Chris
▴ 280
1
vote
2
replies
1.3k
views
How to fix "the kernel appears to have died. It will restart automatically."?
scvi
19 months ago by
Chris
▴ 280
1
vote
6
replies
2.2k
views
How to fix attributeError: module 'scvi' has no attribute 'model'?
scvi
13 months ago by
Chris
▴ 280
0
votes
0
replies
384
views
Error with import scvi in scRNA-seq with scanpy
scvi
19 months ago by
Chris
▴ 280
3
votes
6
replies
2.3k
views
Error with scanpy package on Jupyter notebook
scanpy
updated 19 months ago by
massa.kassa.sc3na
▴ 600 • written 19 months ago by
Chris
▴ 280
0
votes
0
replies
390
views
Error when install annotables
annotables
19 months ago by
Chris
▴ 280
4
votes
5
replies
820
views
How to fix plotMA() error?
Deseq2
updated 19 months ago by
Dave Carlson
★ 1.7k • written 19 months ago by
Chris
▴ 280
1
vote
2
replies
664
views
Undertand org.Hs.eg.db package
org.Hs.eg.db
19 months ago by
Chris
▴ 280
1
vote
2
replies
548
views
HTSeq.scripts.count: Error occurred when reading beginning of SAM/BAM file.
HTSeq.scripts.count
updated 19 months ago by
GenoMax
142k • written 19 months ago by
Chris
▴ 280
3
votes
4
replies
1.2k
views
How to fix: Error: No module named HTSeq.scripts?
HTSeq
19 months ago by
Chris
▴ 280
5
votes
9
replies
2.2k
views
How to get parameter for cluster in scCATCH tool
scCATCH
updated 20 months ago by
antonioggsousa
3.2k • written 20 months ago by
Chris
▴ 280
3
votes
3
replies
950
views
How to create annotation file to use scSorter tool?
scSorter
updated 20 months ago by
jv
★ 1.8k • written 20 months ago by
Chris
▴ 280
0
votes
1
reply
456
views
Error when run tophat2 (update: solved)
tophat2
19 months ago by
Chris
▴ 280
2
votes
4
replies
890
views
scRNA-seq analysis to compare healthy vs diseased
scRNA-seq
20 months ago by
Chris
▴ 280
5
votes
8
replies
2.5k
views
How to interpret a tSNE or UMAP plot to get biological conclusions ?
scRNA-Seq
written 21 months ago by
Chris
▴ 280
2
votes
3
replies
815
views
RNA-Seq quantification methods
RNA-Seq
updated 20 months ago by
grant.hovhannisyan
★ 2.6k • written 20 months ago by
Chris
▴ 280
3
votes
7
replies
1.1k
views
Leaky RNA
RNA
updated 21 months ago by
benformatics
3.9k • written 21 months ago by
Chris
▴ 280
5
votes
6
replies
2.2k
views
Prepare for a job interview in bioinformatics
advice
career
interview
updated 11 months ago by
Ram
43k • written 21 months ago by
Chris
▴ 280
4
votes
8
replies
1.2k
views
STAR output
STAR
21 months ago by
Chris
▴ 280
1
vote
1
reply
470
views
Align reads to indices file
STAR
updated 21 months ago by
GenoMax
142k • written 21 months ago by
Chris
▴ 280
2
votes
4
replies
1.5k
views
Install bam-readcount
bam-readcount
21 months ago by
Chris
▴ 280
2
votes
5
replies
944
views
Gene-based and transcriptome-based profiling
profiling
21 months ago by
Chris
▴ 280
9
votes
18
replies
3.0k
views
How to know the genome indices from STAR is correct
STAR
21 months ago by
Chris
▴ 280
5
votes
5
replies
925
views
Bam file from STAR
STAR
21 months ago by
Chris
▴ 280
4
votes
11
replies
1.5k
views
Running STAR
STAR
21 months ago by
Chris
▴ 280
8
votes
11
replies
2.0k
views
using STAR instead of HISAT2
STAR
updated 21 months ago by
Ram
43k • written 21 months ago by
Chris
▴ 280
141 results • Page
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