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3
votes
3
replies
887
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DeNovo Assembly - Assigning gene description
braker2 DeNovo-Assembly masurca WGS
updated 11 months ago by 45k • written 11 months ago by ▴ 70
0
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1
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1.8k
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Genbank Bacteriophage Genome Submission - Internal stop codons in CDS sequences
CDS Genome NCBI Genbank
updated 18 months ago by 45k • written 20 months ago by ▴ 70
0
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0
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1.1k
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Comment: Comment: GO enrichment of DEGs - DeNovo RNAseq
2.1 years ago by Sowmya Pulapet ▴ 70
0
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2
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1.1k
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GO enrichment of DEGs - DeNovo RNAseq
DeNovo GO RNA-seq
2.1 years ago by Sowmya Pulapet ▴ 70
0
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0
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2.1k
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Comment: Comment: Number of genes covered in WES
2.2 years ago by Sowmya Pulapet ▴ 70
0
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1
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2.1k
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Comment: Comment: Number of genes covered in WES
2.2 years ago by Sowmya Pulapet ▴ 70
5
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5
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2.1k
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Number of genes covered in WES
targetsequencing WES coverage bedfile
updated 2.2 years ago by ★ 4.4k • written 2.2 years ago by ▴ 70
0
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0
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1.7k
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Comment: Comment: Error: free(): invalid next size (fast) and Aborted (core dumped) while using R
2.3 years ago by Sowmya Pulapet ▴ 70
0
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2
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1.7k
views
Error: free(): invalid next size (fast) and Aborted (core dumped) while using R in Linux server
WGBS R MethylKit
2.3 years ago by Sowmya Pulapet ▴ 70
2
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0
replies
528
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How to to lncRNA analysis from WTS data ?
lncRNA-seq WTS mRNA-seq
2.3 years ago by Sowmya Pulapet ▴ 70
0
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0
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1.1k
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Comment: Comment: Genome scope for Hybrid assembly
2.3 years ago by Sowmya Pulapet ▴ 70
2
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2
replies
1.1k
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Genome scope for Hybrid assembly
Genomescope fastq Hybrid-assembly
updated 2.3 years ago by 45k • written 2.3 years ago by ▴ 70
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0
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5.1k
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Comment: Comment: Convert Nanopore Fast5 files to Fasta format
2.4 years ago by Sowmya Pulapet ▴ 70
0
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0
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5.1k
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Comment: Comment: Convert Nanopore Fast5 files to Fasta format
2.4 years ago by Sowmya Pulapet ▴ 70
0
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0
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5.1k
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Comment: Comment: Convert Nanopore Fast5 files to Fasta format
2.4 years ago by Sowmya Pulapet ▴ 70
5
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6
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5.1k
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Convert Nanopore Fast5 files to Fasta format
fast5 fasta Nanopore
2.4 years ago by Sowmya Pulapet ▴ 70
0
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0
replies
1.1k
views
ANNOVAR filter based annotation - ClinVar
Annovar clinvar
updated 2.5 years ago by 45k • written 2.5 years ago by ▴ 70
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0
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1.6k
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Comment: Comment: Combine VCF files
2.6 years ago by Sowmya Pulapet ▴ 70
0
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1
reply
1.6k
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Comment: Comment: Combine VCF files
2.6 years ago by Sowmya Pulapet ▴ 70
0
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4
replies
1.6k
views
Combine VCF files
vcf bcftools
updated 2.6 years ago by 103k • written 2.6 years ago by ▴ 70
0
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1
reply
4.7k
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Comment: Comment: What are Differentially Expressed Genes ?!!
2.6 years ago by Sowmya Pulapet ▴ 70
0
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0
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4.7k
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Comment: Comment: What are Differentially Expressed Genes ?!!
2.6 years ago by Sowmya Pulapet ▴ 70
9
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8
replies
4.7k
views
7 follow
What are Differentially Expressed Genes ?!!
FDR DEG p-value logFC
updated 2.6 years ago by 89k • written 2.6 years ago by ▴ 70
0
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0
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2.4k
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Comment: Comment: blast engine error empty blast query vector
2.7 years ago by Sowmya Pulapet ▴ 70
0
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4
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2.4k
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blast engine error empty blast query vector
Blast alignment
updated 2.4 years ago by 45k • written 2.7 years ago by ▴ 70
0
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0
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1.2k
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Comment: Comment: Number of samples for lefse analysis
2.7 years ago by Sowmya Pulapet ▴ 70
0
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2
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1.2k
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Number of samples for lefse analysis
16s Lefse metagenome.
2.7 years ago by Sowmya Pulapet ▴ 70
2
votes
3
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3.3k
views
blastn error : mdb_env_open: No such file or directory
Makeblastdb sequence_alignment Blastn
updated 2.8 years ago by 154k • written 2.8 years ago by ▴ 70
1
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0
replies
3.3k
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Answer: Answer: blastn error : mdb_env_open: No such file or directory
2.8 years ago by Sowmya Pulapet ▴ 70
0
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0
replies
3.3k
views
Comment: Comment: blastn error : mdb_env_open: No such file or directory
updated 2.8 years ago by 154k • written 2.8 years ago by ▴ 70
0
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0
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2.1k
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Comment: Comment: Upregulated and downregulated genes from ChIP-seq data
2.8 years ago by Sowmya Pulapet ▴ 70
0
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0
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2.1k
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Comment: Comment: Upregulated and downregulated genes from ChIP-seq data
2.8 years ago by Sowmya Pulapet ▴ 70
3
votes
6
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2.1k
views
Upregulated and downregulated genes from ChIP-seq data
ChIP-seq RNAseq DEG
2.8 years ago by Sowmya Pulapet ▴ 70
0
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1
reply
2.1k
views
Comment: Comment: Upregulated and downregulated genes from ChIP-seq data
2.8 years ago by Sowmya Pulapet ▴ 70
0
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0
replies
693
views
Q30 score from MultiQC
qualityscore Q30 FastQC MultiQC
2.9 years ago by Sowmya Pulapet ▴ 70
0
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0
replies
516
views
Local blast with large query and subject file
fasta alignment Blast
2.9 years ago by Sowmya Pulapet ▴ 70
0
votes
0
replies
554
views
KEGG analysis for shotgun sequencing
Functional-annotation Shotgunsequencing KEGG
2.9 years ago by Sowmya Pulapet ▴ 70
1
vote
1
reply
818
views
Functional annotation of VCF files
annotation ontology Functional gene VCF
updated 3.0 years ago by 6.2k • written 3.0 years ago by ▴ 70
1
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7
replies
2.1k
views
Error with txi.salmon in R
RNAseq salmon quantification gff
updated 3.0 years ago by 89k • written 3.0 years ago by ▴ 70
0
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1
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2.1k
views
Comment: Comment: Error with txi.salmon in R
3.0 years ago by Sowmya Pulapet ▴ 70
0
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1
reply
2.1k
views
Comment: Comment: Error with txi.salmon in R
3.0 years ago by Sowmya Pulapet ▴ 70
0
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1
reply
2.1k
views
Comment: Comment: Error with txi.salmon in R
3.0 years ago by Sowmya Pulapet ▴ 70
0
votes
0
replies
605
views
Gene symbol from trinotate annotation report
gene Trinity Trinotate Annotation symbol
3.1 years ago by Sowmya Pulapet ▴ 70
0
votes
1
reply
1.1k
views
Error with Gatk Haplotypecaller
Gatk Haplotypecaller Bam
updated 3.2 years ago by 166k • written 3.2 years ago by ▴ 70
0
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0
replies
5.4k
views
Comment: Comment: How to Create a multi-sample VCF file
3.2 years ago by Sowmya Pulapet ▴ 70
0
votes
1
reply
5.4k
views
Comment: Comment: How to Create a multi-sample VCF file
3.2 years ago by Sowmya Pulapet ▴ 70
0
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1
reply
5.4k
views
Comment: Comment: How to Create a multi-sample VCF file
3.2 years ago by Sowmya Pulapet ▴ 70
0
votes
2
replies
5.4k
views
Comment: Comment: How to Create a multi-sample VCF file
3.2 years ago by Sowmya Pulapet ▴ 70
2
votes
9
replies
5.4k
views
How to Create a multi-sample VCF file
VCF multi-sample
3.2 years ago by Sowmya Pulapet ▴ 70
0
votes
0
replies
825
views
Error while using GATK Haplotypecaller
Gatk Haplotypecaller Bam
3.2 years ago by Sowmya Pulapet ▴ 70
61 results • Page 1 of 2
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