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468
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Genbank Bacteriophage Genome Submission - Internal stop codons in CDS sequences
CDS
Genome
NCBI
Genbank
updated 5 weeks ago by
Ram
43k • written 12 weeks ago by
Sowmya Pulapet
▴ 70
0
votes
2
replies
571
views
GO enrichment of DEGs - DeNovo RNAseq
DeNovo
GO
RNA-seq
8 months ago by
Sowmya Pulapet
▴ 70
5
votes
5
replies
977
views
Number of genes covered in WES
targetsequencing
WES
coverage
bedfile
updated 8 months ago by
DareDevil
★ 4.3k • written 9 months ago by
Sowmya Pulapet
▴ 70
0
votes
2
replies
815
views
Error: free(): invalid next size (fast) and Aborted (core dumped) while using R in Linux server
WGBS
R
MethylKit
10 months ago by
Sowmya Pulapet
▴ 70
2
votes
0
replies
304
views
How to to lncRNA analysis from WTS data ?
lncRNA-seq
WTS
mRNA-seq
10 months ago by
Sowmya Pulapet
▴ 70
2
votes
2
replies
668
views
Genome scope for Hybrid assembly
Genomescope
fastq
Hybrid-assembly
updated 10 months ago by
Ram
43k • written 10 months ago by
Sowmya Pulapet
▴ 70
4
votes
6
replies
2.6k
views
Convert Nanopore Fast5 files to Fasta format
fast5
fasta
Nanopore
11 months ago by
Sowmya Pulapet
▴ 70
0
votes
0
replies
588
views
ANNOVAR filter based annotation - ClinVar
Annovar
clinvar
updated 12 months ago by
Ram
43k • written 12 months ago by
Sowmya Pulapet
▴ 70
0
votes
4
replies
907
views
Combine VCF files
vcf
bcftools
updated 14 months ago by
Istvan Albert
100k • written 14 months ago by
Sowmya Pulapet
▴ 70
9
votes
8
replies
1.7k
views
7 follow
What are Differentially Expressed Genes ?!!
FDR
DEG
p-value
logFC
updated 14 months ago by
Kevin Blighe
87k • written 14 months ago by
Sowmya Pulapet
▴ 70
0
votes
4
replies
1.4k
views
blast engine error empty blast query vector
Blast
alignment
updated 11 months ago by
Ram
43k • written 15 months ago by
Sowmya Pulapet
▴ 70
0
votes
2
replies
659
views
Number of samples for lefse analysis
16s
Lefse
metagenome.
15 months ago by
Sowmya Pulapet
▴ 70
2
votes
3
replies
2.0k
views
blastn error : mdb_env_open: No such file or directory
Makeblastdb
sequence_alignment
Blastn
updated 16 months ago by
GenoMax
141k • written 16 months ago by
Sowmya Pulapet
▴ 70
3
votes
6
replies
1.1k
views
Upregulated and downregulated genes from ChIP-seq data
ChIP-seq
RNAseq
DEG
16 months ago by
Sowmya Pulapet
▴ 70
0
votes
0
replies
429
views
Q30 score from MultiQC
qualityscore
Q30
FastQC
MultiQC
17 months ago by
Sowmya Pulapet
▴ 70
0
votes
0
replies
317
views
Local blast with large query and subject file
fasta
alignment
Blast
18 months ago by
Sowmya Pulapet
▴ 70
0
votes
0
replies
372
views
KEGG analysis for shotgun sequencing
Functional-annotation
Shotgunsequencing
KEGG
18 months ago by
Sowmya Pulapet
▴ 70
1
vote
1
reply
484
views
Functional annotation of VCF files
annotation
ontology
Functional
gene
VCF
updated 18 months ago by
iraun
6.2k • written 18 months ago by
Sowmya Pulapet
▴ 70
1
vote
7
replies
1.3k
views
Error with txi.salmon in R
RNAseq
salmon
quantification
gff
updated 19 months ago by
ATpoint
82k • written 19 months ago by
Sowmya Pulapet
▴ 70
0
votes
0
replies
367
views
Gene symbol from trinotate annotation report
gene
Trinity
Trinotate
Annotation
symbol
20 months ago by
Sowmya Pulapet
▴ 70
0
votes
1
reply
663
views
Error with Gatk Haplotypecaller
Gatk
Haplotypecaller
Bam
updated 21 months ago by
Pierre Lindenbaum
161k • written 21 months ago by
Sowmya Pulapet
▴ 70
2
votes
9
replies
2.8k
views
How to Create a multi-sample VCF file
VCF
multi-sample
21 months ago by
Sowmya Pulapet
▴ 70
0
votes
0
replies
526
views
Error while using GATK Haplotypecaller
Gatk
Haplotypecaller
Bam
21 months ago by
Sowmya Pulapet
▴ 70
0
votes
6
replies
1.0k
views
VEP synonyms file
Ensembl-VEP
annotation
synonyms
21 months ago by
Sowmya Pulapet
▴ 70
0
votes
0
replies
432
views
VEP custom annotation - synonymous file
Ensembl-VEP
annotation
synonymsfile
21 months ago by
Sowmya Pulapet
▴ 70
2
votes
9
replies
2.0k
views
Different line length in fasta file
Fasta
VEP
Ensembl-VEP
annotation
samtools
updated 10 months ago by
Ram
43k • written 22 months ago by
Sowmya Pulapet
▴ 70
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