Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
Showing :
questions
0
votes
12
replies
651
views
BWA MEM different synthax on linux (bash) and macOS (zsh)
MEM
BWA
8 weeks ago by
gernophil
▴ 80
0
votes
0
replies
134
views
Tutorial for COSMIC? Any way to calculate VAF?
COSMIC
8 weeks ago by
gernophil
▴ 80
3
votes
3
replies
405
views
Would a string composed of `#CHROM`, `POS`, `REF` and `ALT` uniquely identify a variant?
VCF
updated 9 weeks ago by
LauferVA
4.2k • written 9 weeks ago by
gernophil
▴ 80
0
votes
4
replies
415
views
Packages don't update, but no error or warning is thrown
Bioconductor
3 months ago by
gernophil
▴ 80
2
votes
3
replies
415
views
VEP - select consequences version
VEP
updated 3 months ago by
GenoMax
142k • written 3 months ago by
gernophil
▴ 80
2
votes
5
replies
616
views
Is the USCS hg38.chromAlias.txt file availble in a sorted fashion?
chromnames
updated 4 months ago by
Ram
43k • written 4 months ago by
gernophil
▴ 80
1
vote
4
replies
476
views
keep read association with mpileup
mpileup
samtools
updated 4 months ago by
Ram
43k • written 4 months ago by
gernophil
▴ 80
3
votes
19
replies
1.2k
views
extract sequence from genome by region
fasta
updated 4 months ago by
Ram
43k • written 4 months ago by
gernophil
▴ 80
2
votes
3
replies
1.0k
views
Extracting exons using GenomicFeatures is different from manual extraction
R
GenomicFeatures
updated 6 months ago by
alejandrogzi
▴ 120 • written 10 months ago by
gernophil
▴ 80
1
vote
1
reply
598
views
CHOPCHOP command line
sgRNA
chopchop
updated 8 months ago by
GenoMax
142k • written 14 months ago by
gernophil
▴ 80
0
votes
8
replies
1.1k
views
Why did GENCODE change the main annotation file from Comprehensive to Basic
GENCODE
10 months ago by
gernophil
▴ 80
0
votes
1
reply
817
views
CIBERSORTx/fractions docker outputs only zeros if --absolute TRUE
docker
CIBERSORTx
10 months ago by
gernophil
▴ 80
1
vote
2
replies
532
views
Use DESeq (1) data with DESeq2 Package?
DESeq
DESeq2
10 months ago by
gernophil
▴ 80
0
votes
7
replies
1.4k
views
fasterq-dump outputs "Cannot use '--ngc' as ngc file."
snakemake
sra-tools
SRA
updated 10 months ago by
Ram
43k • written 12 months ago by
gernophil
▴ 80
1
vote
3
replies
718
views
biomaRt crashes R studio
biomaRt
updated 14 months ago by
Matthias Zepper
4.6k • written 14 months ago by
gernophil
▴ 80
10
votes
4
replies
1.2k
views
Difference between ENSEMBL releases
release
genome
ENSEMBL
updated 15 months ago by
Jean-Karim Heriche
27k • written 15 months ago by
gernophil
▴ 80
2
votes
5
replies
1.1k
views
Why multiple SYMBOLS, Consequences... for Variant Effect Predictor (VEP)
VEP
updated 5 weeks ago by
barslmn
★ 2.1k • written 17 months ago by
gernophil
▴ 80
3
votes
3
replies
743
views
Annotate VCF with Pathways (without performing GSEA)
pathway_analysis
VCF
17 months ago by
gernophil
▴ 80
1
vote
1
reply
479
views
Download SraRunTable via entrez-direct
SRA
RunTable
command
line
updated 17 months ago by
GenoMax
142k • written 17 months ago by
gernophil
▴ 80
1
vote
3
replies
874
views
bcftools merge doesn't recalculate AF
bcftools
updated 19 months ago by
4galaxy77
2.8k • written 19 months ago by
gernophil
▴ 80
0
votes
0
replies
444
views
Filtering and sorting of multiallelic sites
VCF
multiallelic
20 months ago by
gernophil
▴ 80
3
votes
1
reply
804
views
Better splitting of mutliallelic sites then bcftools norm --m-any
bcftools
updated 10 months ago by
Ram
43k • written 20 months ago by
gernophil
▴ 80
2
votes
6
replies
1.4k
views
Can't convert multiple SAMs from SRA to BAMs
samtools
sam-dump
SRA
updated 10 months ago by
Ram
43k • written 21 months ago by
gernophil
▴ 80
2
votes
7
replies
1.2k
views
headers missing in efetch results for SRA database
SRA
Entrez.Direct
efetch
updated 21 months ago by
PeterC_NCBI
▴ 410 • written 21 months ago by
gernophil
▴ 80
24 results • Page
1 of 1
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6