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288
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what to do with contaminats (metabolites of external source) in metabolomics data
normalisation metabolomics
9 months ago by theodore ▴ 90
1
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3
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2.0k
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5scRNA (GEX, Cell surface, TCR) fastq demultiplexing sub-sequent analysis
RNA-Seq hashtag seurat R demultiplexing
updated 2.9 years ago by ▴ 20 • written 3.1 years ago by ▴ 90
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2.0k
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Comment: Comment: 5scRNA (GEX, Cell surface, TCR) fastq demultiplexing sub-sequent analysis
2.9 years ago by theodore ▴ 90
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0
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954
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Comment: C: RNA-seq spike-ins with Drosophila cells
3.2 years ago by theodore ▴ 90
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2
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954
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RNA-seq spike-ins with Drosophila cells
RNA-Seq spike-ins
3.2 years ago by theodore ▴ 90
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0
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2.9k
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Comment: C: DiffBind 3.0: Extensive updates in Bioconductor 3.12
3.4 years ago by theodore ▴ 90
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0
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2.9k
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Comment: A: DiffBind 3.0: Extensive updates in Bioconductor 3.12
3.4 years ago by theodore ▴ 90
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0
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19k
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Comment: C: bcl2fastq2: how to correctly use the --use-bases-mask for different sequencing m
3.8 years ago by theodore ▴ 90
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0
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19k
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Comment: C: bcl2fastq2: how to correctly use the --use-bases-mask for different sequencing m
3.8 years ago by theodore ▴ 90
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1
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19k
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Comment: C: bcl2fastq2: how to correctly use the --use-bases-mask for different sequencing m
4.0 years ago by theodore ▴ 90
1
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1
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19k
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Answer: A: bcl2fastq2: how to correctly use the --use-bases-mask for different sequencing m
4.0 years ago by theodore ▴ 90
1
vote
1
reply
19k
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Answer: A: bcl2fastq2: how to correctly use the --use-bases-mask for different sequencing m
4.0 years ago by theodore ▴ 90
0
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0
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2.2k
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Comment: C: many intronic reads and no features counts in 3' RNA-seq sequencing
4.2 years ago by theodore ▴ 90
2
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5.5k
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Comment: C: What is ERCC spike-in really saying about my sequencing run?
4.3 years ago by theodore ▴ 90
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0
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2.8k
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Answer: A: manipulating text in linux enviroment
updated 4.3 years ago by 43k • written 9.9 years ago by ▴ 90
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1
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2.8k
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Comment: C: manipulating text in linux enviroment
updated 4.3 years ago by 43k • written 9.9 years ago by ▴ 90
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0
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23k
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Comment: C: BWA 0.7.12 and Unique reads, -r, -c options, XA: and SA: optional tags on SAM ou
updated 4.4 years ago by 43k • written 7.8 years ago by ▴ 90
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0
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23k
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Comment: C: YA BWA Unique reads, -r, -c options, XA: option on SAM,
updated 4.4 years ago by 43k • written 8.8 years ago by ▴ 90
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1
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23k
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Comment: Comment: BWA 0.7.12 and Unique reads, -r, -c options, XA: and SA: optional tags on SAM ou
updated 16 months ago by 43k • written 8.8 years ago by ▴ 90
0
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1
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23k
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Comment: Comment: BWA 0.7.12 and Unique reads, -r, -c options, XA: and SA: optional tags on SAM ou
updated 16 months ago by 43k • written 8.8 years ago by ▴ 90
1
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0
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59k
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Comment: C: Volcano Plot from DEseq2
4.5 years ago by theodore ▴ 90
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1
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59k
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Comment: C: Volcano Plot from DEseq2
4.5 years ago by theodore ▴ 90
0
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1
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59k
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Comment: C: Volcano Plot from DEseq2
4.5 years ago by theodore ▴ 90
0
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1
reply
59k
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Comment: C: Volcano Plot from DEseq2
4.5 years ago by theodore ▴ 90
0
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0
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885
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diffbind dba.plotvolcano bLabels option use genames instead of numbers
diffbind Volcano
4.8 years ago by theodore ▴ 90
9
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9
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23k
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BWA 0.7.12 and Unique reads, -r, -c options, XA: and SA: optional tags on SAM output,
BWA SAM
updated 16 months ago by 43k • written 8.8 years ago by ▴ 90
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0
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2.1k
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Comment: C: False output when intersecting methylation data
6.5 years ago by theodore ▴ 90
2
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15
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2.1k
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False output when intersecting methylation data
intersect multiIntersect WGBS
updated 6.6 years ago by 35k • written 6.6 years ago by ▴ 90
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1
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2.1k
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Comment: C: False output when intersecting methylation data
6.6 years ago by theodore ▴ 90
0
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1
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2.1k
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Comment: C: False output when intersecting methylation data
6.6 years ago by theodore ▴ 90
0
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1
reply
2.1k
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Comment: C: False output when intersecting methylation data
6.6 years ago by theodore ▴ 90
0
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0
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2.1k
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Answer: A: False output when intersecting methylation data
6.6 years ago by theodore ▴ 90
0
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1
reply
2.1k
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Comment: C: False output when intersecting methylation data
6.6 years ago by theodore ▴ 90
0
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1
reply
2.1k
views
Comment: C: False output when intersecting methylation data
6.6 years ago by theodore ▴ 90
6
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9
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2.8k
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[SOLVED] manipulating text in linux enviroment
awk sed Pipeline File-Manipulation
updated 2.6 years ago by 43k • written 9.9 years ago by ▴ 90
0
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0
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2.3k
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Comment: C: oligoMatch from ucsc
7.0 years ago by theodore ▴ 90
1
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3
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2.3k
views
oligoMatch from ucsc
oligoMatch ucsc
updated 7.0 years ago by 23k • written 7.0 years ago by ▴ 90
0
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0
replies
9.3k
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Comment: Comment: Correlation For Chip-Seq Data In R -Input Data Format
updated 18 months ago by 43k • written 8.6 years ago by ▴ 90
1
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0
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23k
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Comment: C: Bwa-Mem: Discriminate Between Reads Mapping Uniquely And Those Mapping In Multip
8.7 years ago by theodore ▴ 90
0
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0
replies
2.8k
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Comment: C: manipulating text in linux enviroment
9.9 years ago by theodore ▴ 90
0
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1
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2.8k
views
Comment: C: manipulating text in linux enviroment
9.9 years ago by theodore ▴ 90
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