Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
668
views
Comment: Comment: install of genomestudio 2.0.5 in aws
20 months ago by bioguy24 ▴ 230
1
vote
2
replies
668
views
install of genomestudio 2.0.5 in aws
illumina
20 months ago by bioguy24 ▴ 230
0
votes
0
replies
1.5k
views
Comment: Comment: csv to custom manifest file
2.4 years ago by bioguy24 ▴ 230
0
votes
4
replies
1.5k
views
csv to custom manifest file
illumina
2.4 years ago by bioguy24 ▴ 230
0
votes
0
replies
1.1k
views
Comment: Comment: convert illumina manifest to csv
2.4 years ago by bioguy24 ▴ 230
1
vote
2
replies
1.1k
views
convert illumina manifest to csv
illumina
updated 2.4 years ago by 13k • written 2.4 years ago by ▴ 230
8
votes
6
replies
4.3k
views
bwa 0.7.18 download to fix compile fail with GCC 10
bwa
updated 17 months ago by 3.1k • written 3.4 years ago by ▴ 230
0
votes
1
reply
4.3k
views
Comment: Comment: bwa 0.7.18 download to fix compile fail with GCC 10
3.4 years ago by bioguy24 ▴ 230
6
votes
15
replies
3.7k
views
processing in strelka2 with multiples bam file in directory
strelka2
updated 3.7 years ago by ▴ 70 • written 5.7 years ago by ▴ 230
0
votes
1
reply
2.8k
views
STAR-Fusion error while executing and produces some intermediates files
Star-fusion
updated 4.7 years ago by 89k • written 6.3 years ago by ▴ 230
1
vote
0
replies
18k
views
Answer: A: vcf to bam
updated 5.0 years ago by 45k • written 10.0 years ago by ▴ 230
1
vote
1
reply
1.6k
views
Haplotypecaller indel realignment
haplotypecaller
5.7 years ago by bioguy24 ▴ 230
0
votes
0
replies
1.2k
views
Comment: C: sugesstions to optimize an abra2 command
5.7 years ago by bioguy24 ▴ 230
1
vote
2
replies
1.2k
views
sugesstions to optimize an abra2 command
abra2
5.7 years ago by bioguy24 ▴ 230
0
votes
0
replies
748
views
q30 using multicovergebam greater the target length
multibam coverage
updated 5.7 years ago by 20 • written 5.8 years ago by ▴ 230
0
votes
1
reply
4.5k
views
Comment: C: How can I compare two columns of a two VCF files
updated 5.7 years ago by 45k • written 9.7 years ago by ▴ 230
0
votes
1
reply
3.7k
views
Comment: C: processing in strelka2 with multiples bam file in directory
5.7 years ago by bioguy24 ▴ 230
0
votes
1
reply
3.7k
views
Comment: C: processing in strelka2 with multiples bam file in directory
5.7 years ago by bioguy24 ▴ 230
0
votes
1
reply
3.7k
views
Comment: C: processing in strelka2 with multiples bam file in directory
5.7 years ago by bioguy24 ▴ 230
0
votes
1
reply
3.7k
views
Comment: C: processing in strelka2 with multiples bam file in directory
5.7 years ago by bioguy24 ▴ 230
0
votes
1
reply
3.7k
views
Comment: C: processing in strelka2 with multiples bam file in directory
5.7 years ago by bioguy24 ▴ 230
0
votes
1
reply
3.7k
views
Comment: C: processing in strelka2 with multiples bam file in directory
5.7 years ago by bioguy24 ▴ 230
0
votes
1
reply
3.7k
views
Comment: C: processing in strelka2 with multiples bam file in directory
5.7 years ago by bioguy24 ▴ 230
0
votes
0
replies
4.3k
views
Comment: C: Need recommendation for a virtual machine or linux cluster for ngs analysis
updated 5.8 years ago by 45k • written 9.8 years ago by ▴ 230
0
votes
0
replies
946
views
calculate per base depth and q30 reads from bam using a bed
samtools depth and q30
5.8 years ago by bioguy24 ▴ 230
0
votes
0
replies
3.3k
views
Comment: A: picard tools error in strand field
updated 5.8 years ago by 45k • written 9.9 years ago by ▴ 230
0
votes
0
replies
3.3k
views
Comment: C: picard tools error in strand field
updated 5.8 years ago by 45k • written 9.9 years ago by ▴ 230
2
votes
2
replies
4.4k
views
bedtools 2.25 vs bedtools2.20 coverageBed output not consistent
ngs bedtools
updated 3.0 years ago by 45k • written 10.0 years ago by ▴ 230
0
votes
1
reply
5.9k
views
Comment: C: bowtie2 install on ubuntu
updated 5.9 years ago by 45k • written 10.1 years ago by ▴ 230
0
votes
1
reply
5.9k
views
Comment: Comment: bowtie2 install on ubuntu
updated 2.9 years ago by 45k • written 10.1 years ago by ▴ 230
0
votes
0
replies
1.1k
views
Comment: C: prepare file for depth of coverage
6.1 years ago by bioguy24 ▴ 230
1
vote
2
replies
1.1k
views
prepare file for depth of coverage
depth of coverage
6.1 years ago by bioguy24 ▴ 230
0
votes
2
replies
2.6k
views
targets in a bed at or above a coverage
bed bam
updated 2.5 years ago by 45k • written 6.2 years ago by ▴ 230
0
votes
0
replies
1.4k
views
Comment: C: report every base in a bam using bed as input
6.3 years ago by bioguy24 ▴ 230
3
votes
2
replies
1.4k
views
report every base in a bam using bed as input
samtools bcftools
updated 6.3 years ago by 166k • written 6.3 years ago by ▴ 230
1
vote
0
replies
2.1k
views
Answer: A: compare two columns of two files
6.4 years ago by bioguy24 ▴ 230
0
votes
0
replies
2.3k
views
Comment: C: correct mark duplicated error using python and pysam to filter out secondary ali
6.4 years ago by bioguy24 ▴ 230
0
votes
0
replies
7.6k
views
Answer: A: Extract gene names from annotated vcf file
6.4 years ago by bioguy24 ▴ 230
0
votes
1
reply
2.3k
views
correct mark duplicated error using python and pysam to filter out secondary alignments
python pysam
6.4 years ago by bioguy24 ▴ 230
3
votes
4
replies
3.1k
views
error using bqsr and incompatible contigs
gatk bqsr
updated 6.7 years ago by 20 • written 7.1 years ago by ▴ 230
5
votes
4
replies
6.5k
views
samtools covert to bam, sort and index all gz.sam
samtools parellel
updated 6.7 years ago by ★ 4.3k • written 6.7 years ago by ▴ 230
1
vote
2
replies
3.3k
views
using vcftools to add gene name to vcf file
vcftools
updated 7.0 years ago by 45k • written 9.6 years ago by ▴ 230
1
vote
2
replies
3.4k
views
add gene name from bed file to vcf in vcftools
vcftools
updated 3.2 years ago by 45k • written 9.6 years ago by ▴ 230
0
votes
0
replies
3.3k
views
Comment: C: using vcftools to add gene name to vcf file
updated 7.0 years ago by 45k • written 9.6 years ago by ▴ 230
0
votes
0
replies
3.4k
views
Comment: Comment: add gene name from bed file to vcf in vcftools
updated 3.2 years ago by 45k • written 9.6 years ago by ▴ 230
0
votes
0
replies
2.8k
views
Comment: C: gatk vqsr --recal-file error
7.1 years ago by bioguy24 ▴ 230
2
votes
2
replies
2.8k
views
gatk vqsr --recal-file error
gatk vqsr
updated 7.1 years ago by 5.8k • written 7.1 years ago by ▴ 230
0
votes
0
replies
3.1k
views
Comment: C: error using bqsr and incompatible contigs
7.1 years ago by bioguy24 ▴ 230
0
votes
0
replies
4.5k
views
Comment: C: GATK MarkDuplicates output and bam
7.1 years ago by bioguy24 ▴ 230
0
votes
1
reply
4.5k
views
Comment: C: GATK MarkDuplicates output and bam
7.1 years ago by bioguy24 ▴ 230
237 results • Page 1 of 5
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6