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0
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1.6k
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Comment: Comment: Haplotype specific alleles
2.5 years ago by Korsocius ▴ 270
2
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3
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1.6k
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Haplotype specific alleles
freuqency bam haplotype
2.5 years ago by Korsocius ▴ 270
5
votes
2
replies
1.0k
views
find function with samtools - convert format to all subfolders
cram bam samtools
updated 2.4 years ago by 45k • written 3.5 years ago by ▴ 270
0
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0
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16k
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Comment: Comment: List all available databases for ANNOVAR
5.0 years ago by Korsocius ▴ 270
0
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1
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71k
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Comment: C: How To Sort Bed Format File
updated 5.9 years ago by 45k • written 8.4 years ago by ▴ 270
16
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1
reply
71k
views
Answer: A: How To Sort Bed Format File
updated 6.3 years ago by 12k • written 10.7 years ago by ▴ 270
0
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0
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2.5k
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Comment: A: Error in SAM to BAM conversion
6.4 years ago by Korsocius ▴ 270
3
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4
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3.5k
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Parallel for bwa mem - problem with -R argument for ID and SM
parallel alignment bwa
updated 6.6 years ago by 89k • written 7.7 years ago by ▴ 270
0
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1
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5.3k
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Comment: C: How to combine multiple tools to detct SVs in WES data
7.7 years ago by Korsocius ▴ 270
0
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0
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3.5k
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Comment: C: Parallel for bwa mem - problem with -R argument for ID and SM
7.7 years ago by Korsocius ▴ 270
0
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0
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8.0k
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Comment: C: Using parallel with Mem
7.7 years ago by Korsocius ▴ 270
0
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1
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8.0k
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Answer: A: Using parallel with Mem
7.7 years ago by Korsocius ▴ 270
0
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0
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4.2k
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Comment: C: Is it possible to run variant calling software in parallel, are there any Shell
7.8 years ago by Korsocius ▴ 270
0
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0
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8.3k
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Comment: C: Awk command for fastq read length and number of reads?
7.8 years ago by Korsocius ▴ 270
0
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0
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8.6k
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Answer: A: Software To Call Somatic Indels?
7.8 years ago by Korsocius ▴ 270
0
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0
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4.2k
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Comment: C: Is it possible to run variant calling software in parallel, are there any Shell
7.8 years ago by Korsocius ▴ 270
0
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1
reply
4.2k
views
Comment: C: Is it possible to run variant calling software in parallel, are there any Shell
7.8 years ago by Korsocius ▴ 270
1
vote
5
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2.0k
views
Merge series and recognize end of it - AWK
AWK Merge
updated 7.8 years ago by 36k • written 7.8 years ago by ▴ 270
0
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1
reply
2.0k
views
Comment: C: Merge series and recognize end of it - AWK
7.8 years ago by Korsocius ▴ 270
4
votes
1
reply
18k
views
Answer: A: How to remove Bad Nucleotides represented by "N" from FASTA file by using UNIX?
7.9 years ago by Korsocius ▴ 270
2
votes
2
replies
1.8k
views
Paralellize samtools piped with awk
parallel samtools
8.0 years ago by Korsocius ▴ 270
0
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0
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6.0k
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Comment: C: How to get coordinates from HGVSc, HGVSp and gene name
8.1 years ago by Korsocius ▴ 270
3
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4
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6.0k
views
How to get coordinates from HGVSc, HGVSp and gene name
next-gen hgvs
updated 8.1 years ago by 24k • written 8.1 years ago by ▴ 270
0
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0
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2.1k
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Comment: C: Change signification in bam for duplicates
8.8 years ago by Korsocius ▴ 270
2
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2
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2.1k
views
Change signification in bam for duplicates
sam bam duplicates
updated 8.8 years ago by 105k • written 8.8 years ago by ▴ 270
0
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0
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3.2k
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Comment: C: Counting summary info (count of reads and average GC) for segment with specific
8.9 years ago by Korsocius ▴ 270
0
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1
reply
3.2k
views
Comment: C: Counting summary info (count of reads and average GC) for segment with specific
8.9 years ago by Korsocius ▴ 270
0
votes
1
reply
3.2k
views
Comment: C: Counting summary info (count of reads and average GC) for segment with specific
8.9 years ago by Korsocius ▴ 270
0
votes
6
replies
3.2k
views
Counting summary info (count of reads and average GC) for segment with specific length
next-gen genome
updated 8.9 years ago by 7.1k • written 8.9 years ago by ▴ 270
1
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0
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65k
views
Comment: C: How Can I Know The Length Of Mapped Reads From Bam File?
9.2 years ago by Korsocius ▴ 270
0
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0
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8.6k
views
Answer: A: Homozygous Ref Calls And No Calls
9.2 years ago by Korsocius ▴ 270
0
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0
replies
1.9k
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Fusion gene partner
DNA
9.4 years ago by Korsocius ▴ 270
0
votes
4
replies
3.3k
views
ASCII conversion from bam file
ASCII Quality
updated 3.7 years ago by 45k • written 11.0 years ago by ▴ 270
0
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1
reply
18k
views
Comment: C: How To Create A Venn Diagram Of Sample1.Vcf, Sample2.Vcf And Sample1&2(Union).Vc
10.1 years ago by Korsocius ▴ 270
5
votes
5
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4.4k
views
Count of GC in row, but not from N bases
GC
updated 2.8 years ago by 45k • written 10.5 years ago by ▴ 270
0
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1
reply
4.4k
views
Comment: C: Count of GC in row, but not from N bases
10.5 years ago by Korsocius ▴ 270
0
votes
0
replies
4.4k
views
Comment: Comment: Count of GC in row, but not from N bases
updated 2.8 years ago by 45k • written 10.5 years ago by ▴ 270
1
vote
0
replies
5.4k
views
Comment: C: BEDTools genomecov command and input file isse
10.5 years ago by Korsocius ▴ 270
0
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0
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2.7k
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Comment: Comment: bedtools probelm of syntax
updated 3.5 years ago by 45k • written 10.7 years ago by ▴ 270
0
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1
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2.7k
views
Comment: Comment: bedtools probelm of syntax
updated 3.5 years ago by 45k • written 10.7 years ago by ▴ 270
4
votes
4
replies
2.7k
views
bedtools probelm of syntax
map bedtools DNA
updated 3.5 years ago by 45k • written 10.7 years ago by ▴ 270
1
vote
1
reply
2.5k
views
Comment: Comment: R plot with different point in graph
updated 3.6 years ago by 45k • written 10.8 years ago by ▴ 270
4
votes
3
replies
2.5k
views
R plot with different point in graph
plot R
updated 3.6 years ago by 45k • written 10.8 years ago by ▴ 270
0
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0
replies
16k
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Comment: C: Calculating GC content from BAM file by BED file
10.8 years ago by Korsocius ▴ 270
0
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1
reply
16k
views
Comment: C: Calculating GC content from BAM file by BED file
10.9 years ago by Korsocius ▴ 270
0
votes
0
replies
3.3k
views
Comment: C: ASCII conversion from bam file
11.0 years ago by Korsocius ▴ 270
0
votes
1
reply
3.3k
views
Comment: Comment: ASCII conversion from bam file
updated 3.7 years ago by 45k • written 11.0 years ago by ▴ 270
20
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16
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6.0k
views
6 follow
Parallel for shell script with different output
shell parallel
updated 3.8 years ago by 45k • written 11.0 years ago by ▴ 270
0
votes
1
reply
6.0k
views
Comment: C: Parallel for shell script with different output
11.0 years ago by Korsocius ▴ 270
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