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Comment: Comment: Display the results obtained from DAVID and g:profiler functional annotation to
3.2 years ago by deepue ▴ 160
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13k
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Comment: Comment: How to avoid conversion of gene symbols to date format in Excel
3.5 years ago by deepue ▴ 160
1
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1
reply
2.8k
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Association analysis of big-data in R/PLINK
R plink snp
updated 3.8 years ago by 20 • written 9.2 years ago by ▴ 160
1
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1
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1.2k
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biomaRt search for a list of values [dplyr + column(s)]
BiomaRt Ensembl
updated 4.3 years ago by 13k • written 4.3 years ago by ▴ 160
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0
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3.3k
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Comment: C: Using multiple filters in BiomaRt's getSequence
4.3 years ago by deepue ▴ 160
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1
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2.9k
views
How to extract the alignment sequence(progressiveMauve) from backbone file
mauve progressiveMauve genome backbone alignment
updated 2.3 years ago by 44k • written 8.8 years ago by ▴ 160
0
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1
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10k
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Comment: C: BWA alignment using paired end reads from different lanes
updated 4.9 years ago by 44k • written 9.6 years ago by ▴ 160
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1
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4.9k
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Comment: C: How to download multiple expression datasets from EBI database using ArrayExpres
updated 5.0 years ago by 44k • written 9.0 years ago by ▴ 160
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1
reply
5.9k
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Comment: C: Plink extract SNPs from .ped file using ID
updated 5.0 years ago by 44k • written 9.3 years ago by ▴ 160
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0
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52k
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Answer: A: PLINK: merge .bed files
updated 5.0 years ago by 44k • written 9.3 years ago by ▴ 160
2
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5
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3.1k
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How to check whether 'bwa aln' succeeded ?
sequencing alignment
updated 2.4 years ago by 44k • written 9.6 years ago by ▴ 160
7
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3
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22k
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How to identify Homozygous or Heterozygous variants from the annotation file ?
SNP next-gen
updated 6.2 years ago by 88k • written 9.5 years ago by ▴ 160
0
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1
reply
1.2k
views
How to extract disease state of all samples from an experiment?
ArrayExpress R Microarray
updated 6.7 years ago by 20 • written 6.9 years ago by ▴ 160
2
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1
reply
3.4k
views
How to correct invalid genotype in ped file ?
plink SNP genotype
updated 2.2 years ago by 44k • written 9.0 years ago by ▴ 160
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0
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1.4k
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Mapping between two affymetrix arrays
ensembl biomart mapping affymetrix
8.1 years ago by deepue ▴ 160
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0
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2.2k
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Answer: A: Problem with ArrayExpress() command. Please help ..
8.1 years ago by deepue ▴ 160
1
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1
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3.3k
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Answer: A: Affy old package installation in R
8.1 years ago by deepue ▴ 160
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1
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2.0k
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Answer: A: Masters in bioinformatics
8.2 years ago by deepue ▴ 160
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0
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3.5k
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Comment: C: Ensembl datacentre shut-down: Friday 26th August - Tuesday 30th August 2016
8.2 years ago by deepue ▴ 160
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0
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3.5k
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Comment: C: Ensembl datacentre shut-down: Friday 26th August - Tuesday 30th August 2016
8.2 years ago by deepue ▴ 160
3
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1
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3.5k
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Answer: A: Ensembl datacentre shut-down: Friday 26th August - Tuesday 30th August 2016
8.2 years ago by deepue ▴ 160
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0
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1.6k
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How to extract organism information from the Expression Atlas experiments using SPARQL queries
R SPARQL ExpressionAtlas rdf
8.4 years ago by deepue ▴ 160
1
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1
reply
1.7k
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caret svm for precomputed kernels
R caret svm kernels
8.5 years ago by deepue ▴ 160
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0
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2.8k
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Comment: C: pairwiseAlignment in R
8.7 years ago by deepue ▴ 160
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2
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2.8k
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pairwiseAlignment in R
R alignment local
updated 8.7 years ago by 27k • written 8.7 years ago by ▴ 160
0
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2
replies
1.7k
views
Apt way to perform multi pairwise alignments ?
alignment genome
updated 8.8 years ago by ★ 1.2k • written 8.8 years ago by ▴ 160
9
votes
14
replies
10k
views
BWA alignment using paired end reads from different lanes
alignment WES bwa
updated 2.4 years ago by 44k • written 9.6 years ago by ▴ 160
0
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0
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2.7k
views
Comment: C: Searching Project in bioinformatics
9.0 years ago by deepue ▴ 160
2
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3
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4.9k
views
How to download multiple expression datasets from EBI database using ArrayExpress
parallel ebi microarray
updated 2.2 years ago by 44k • written 9.0 years ago by ▴ 160
0
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1
reply
1.8k
views
Quantitative trait Association analysis of Animal genetic data
SNP association
updated 2.2 years ago by 44k • written 9.1 years ago by ▴ 160
0
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0
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1.4k
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Association analysis of different angiogenic markers with SNPs
statistical-test SNP association
updated 2.1 years ago by 44k • written 9.2 years ago by ▴ 160
0
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0
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2.6k
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Comment: C: compare two ped files with different number of snp information
9.3 years ago by deepue ▴ 160
0
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2
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2.6k
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compare two ped files with different number of snp information
plink
9.3 years ago by deepue ▴ 160
1
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3
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5.9k
views
Plink extract SNPs from .ped file using ID
plink gwas SNP
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 160
0
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0
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22k
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Comment: C: How to identify Homozygous or Heterozygous variants from the annotation file ?
9.5 years ago by deepue ▴ 160
0
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1
reply
3.7k
views
Comment: Comment: How to use the the filters created from VariantFiltration while using Annovar?
updated 21 months ago by 44k • written 9.5 years ago by ▴ 160
0
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1
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3.7k
views
Comment: Comment: How to use the the filters created from VariantFiltration while using Annovar?
updated 21 months ago by 44k • written 9.5 years ago by ▴ 160
3
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5
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3.7k
views
How to use the the filters created from VariantFiltration while using Annovar?
NGS Annovar Annotation VariantFiltration snps
updated 21 months ago by 44k • written 9.5 years ago by ▴ 160
1
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1
reply
34k
views
Answer: Answer: Help a graduate student going into Bioinformatics looking for a new personal lap
updated 21 months ago by 44k • written 9.5 years ago by ▴ 160
0
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0
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4.3k
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Comment: C: How to identify Denovo Mutations in the child compared with parents?
9.5 years ago by deepue ▴ 160
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1
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4.3k
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Comment: Comment: How to identify Denovo Mutations in the child compared with parents?
updated 21 months ago by 44k • written 9.5 years ago by ▴ 160
2
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6
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4.3k
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How to identify Denovo Mutations in the child compared with parents?
next-gen exome-sequencing SNP
updated 21 months ago by 44k • written 9.5 years ago by ▴ 160
0
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0
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4.3k
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Comment: C: How to identify Denovo Mutations in the child compared with parents?
9.5 years ago by deepue ▴ 160
1
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1
reply
4.4k
views
GATK BaseRecalibration - Error: Index not found
SNP GATK BaseRecalibration
updated 21 months ago by 44k • written 9.5 years ago by ▴ 160
0
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0
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6.0k
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Comment: Comment: GATK BaseRecalibrator Knownsites - where to download for vcf for human exome seq
updated 2.3 years ago by 44k • written 9.6 years ago by ▴ 160
0
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1
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6.0k
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Comment: Comment: GATK BaseRecalibrator Knownsites - where to download for vcf for human exome seq
updated 2.3 years ago by 44k • written 9.6 years ago by ▴ 160
0
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5
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6.0k
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GATK BaseRecalibrator Knownsites - where to download for vcf for human exome sequencing analysis ?
next-gen SNP gatk BaseRecalibrator
updated 2.2 years ago by • 0 • written 9.6 years ago by ▴ 160
1
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1
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2.8k
views
samtools error when using pipeline view/sort/index
pipeline SNP next-gen-sequencing samtools
updated 2.4 years ago by 44k • written 9.6 years ago by ▴ 160
0
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0
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46k
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Comment: Comment: How To Sort Sam File
updated 2.4 years ago by 44k • written 9.6 years ago by ▴ 160
0
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1
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5.8k
views
Comment: C: Picard: EstimateLibraryComplexity -> OutOfMemoryError
9.6 years ago by deepue ▴ 160
58 results • Page 1 of 2
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