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0
votes
1
reply
4.1k
views
Comment:
A: conditional loop does not work for plotting in R !!
updated 4.8 years ago by
Ram
44k • written 8.7 years ago by
unique379
▴ 120
0
votes
0
replies
2.3k
views
Comment:
A: To check quality of miRNA-seq library
updated 4.8 years ago by
Ram
44k • written 8.8 years ago by
unique379
▴ 120
0
votes
1
reply
2.2k
views
Comment:
C: Unusual behavior of grepl in R.
updated 4.9 years ago by
Ram
44k • written 8.9 years ago by
unique379
▴ 120
6
votes
9
replies
4.6k
views
7 follow
any tool or R package for integrated analysis of miRNA and mRNA expression data ??
NGS
microarray
R
RNA-Seq
updated 2.1 years ago by
Ram
44k • written 9.1 years ago by
unique379
▴ 120
1
vote
0
replies
24k
views
Comment:
C: htseq-counts output merge into one matrix ??
5.7 years ago by
unique379
▴ 120
2
votes
0
replies
1.9k
views
Problems with breakdancer (sv caller) output.
SV
breakdancer
next-gen
delly
svtyper
5.7 years ago by
unique379
▴ 120
6
votes
7
replies
8.0k
views
6 follow
i cant sort bed file. Error in bedtools merge.
next-gen
bedtools
updated 3 months ago by
theodore
▴ 90 • written 8.6 years ago by
unique379
▴ 120
2
votes
1
reply
8.0k
views
Comment:
C: i cant sort bed file. Error in bedtools merge.
updated 6.0 years ago by
Ram
44k • written 8.6 years ago by
unique379
▴ 120
0
votes
0
replies
8.0k
views
Comment:
C: i cant sort bed file. Error in bedtools merge.
updated 6.0 years ago by
Ram
44k • written 8.6 years ago by
unique379
▴ 120
3
votes
3
replies
4.2k
views
Can't sort gff file ordered by chromosome (ch1,chr2,chr3......chrX).
bash
RNA-Seq
next-gen
updated 6.1 years ago by
Ram
44k • written 8.6 years ago by
unique379
▴ 120
0
votes
1
reply
1.7k
views
Comment:
C: Transform duplicate rows into columns.
6.8 years ago by
unique379
▴ 120
0
votes
0
replies
1.7k
views
Comment:
C: Transform duplicate rows into columns.
6.8 years ago by
unique379
▴ 120
3
votes
6
replies
1.7k
views
Transform duplicate rows into columns.
annotations
RNA-Seq
bash
R
linux
updated 6.8 years ago by
cpad0112
21k • written 6.8 years ago by
unique379
▴ 120
0
votes
0
replies
2.1k
views
Human and Mouse Benchmarking datasets for WGS, WES (variant callling) and RNASeq+differential analysis pipeline.
RNA-Seq
DNASeq
WGS
WES
7.1 years ago by
unique379
▴ 120
0
votes
1
reply
1.5k
views
Need a piece of advice for microbiome data
microbiome
MiSeq
7.5 years ago by
unique379
▴ 120
0
votes
0
replies
2.5k
views
Designing of model.matrix for batch correction of Time Course data ?
RNA-Seq
sva
RUVSeq
updated 8.1 years ago by
Biostar
20 • written 8.2 years ago by
unique379
▴ 120
0
votes
1
reply
4.5k
views
Comment:
C: why my resultsNames(deseq) is not the same as model.matrix ?
8.3 years ago by
unique379
▴ 120
0
votes
4
replies
4.5k
views
why my resultsNames(deseq) is not the same as model.matrix ?
RNA-Seq
DESeq2
R
sva
updated 8.3 years ago by
Devon Ryan
104k • written 8.3 years ago by
unique379
▴ 120
2
votes
1
reply
2.6k
views
The best test for the two conditional problem.
RNA-Seq
DESeq2
R
bioconductor
updated 8.4 years ago by
Michael Love
★ 2.6k • written 8.4 years ago by
unique379
▴ 120
0
votes
1
reply
5.8k
views
Comment:
C: Any R and bioconductor packages for non parametric test for rna seq count data.
8.4 years ago by
unique379
▴ 120
0
votes
0
replies
5.8k
views
Comment:
C: Any R and bioconductor packages for non parametric test for rna seq count data.
8.4 years ago by
unique379
▴ 120
2
votes
9
replies
5.8k
views
Any R and bioconductor packages for non parametric test for rna seq count data.
RNA-Seq
R
bioconductor
updated 8.4 years ago by
mkulecka
▴ 360 • written 8.4 years ago by
unique379
▴ 120
0
votes
1
reply
5.8k
views
Comment:
C: Any R and bioconductor packages for non parametric test for rna seq count data.
8.4 years ago by
unique379
▴ 120
1
vote
1
reply
2.2k
views
why two packages have not similar FDR ???
RNA-Seq
R
DESeq
edgeR
miRNASeq
updated 8.5 years ago by
Devon Ryan
104k • written 8.5 years ago by
unique379
▴ 120
0
votes
0
replies
4.1k
views
Comment:
C: conditional loop does not work for plotting in R !!
8.7 years ago by
unique379
▴ 120
0
votes
0
replies
4.1k
views
Comment:
C: conditional loop does not work for plotting in R !!
8.7 years ago by
unique379
▴ 120
1
vote
6
replies
4.1k
views
conditional loop does not work for plotting in R !!
R
updated 2.2 years ago by
Ram
44k • written 8.7 years ago by
unique379
▴ 120
0
votes
3
replies
2.3k
views
To check quality of miRNA-seq library
RNA-Seq
miRNA
Gene-Expression
NGS
updated 2.2 years ago by
Ram
44k • written 8.8 years ago by
unique379
▴ 120
0
votes
0
replies
2.2k
views
Comment:
C: Unusual behavior of grepl in R.
8.9 years ago by
unique379
▴ 120
4
votes
4
replies
2.2k
views
Unusual behavior of grepl in R.
R
updated 2.1 years ago by
Ram
44k • written 8.9 years ago by
unique379
▴ 120
1
vote
1
reply
2.3k
views
what is fair comparison between results generated from one again other pipeline ??
RNA-Seq
next-gen
R
gene
updated 2.1 years ago by
Ram
44k • written 8.9 years ago by
unique379
▴ 120
0
votes
0
replies
4.5k
views
Comment:
Comment: Microarray Time series data analysis through limma ?
updated 2.0 years ago by
Ram
44k • written 9.1 years ago by
unique379
▴ 120
3
votes
2
replies
4.5k
views
Microarray Time series data analysis through limma ?
microarray
bioconductor
RNA-Seq
R
limma
updated 2.0 years ago by
Ram
44k • written 9.1 years ago by
unique379
▴ 120
0
votes
0
replies
1.7k
views
Error using "timecourse" package for microaaray data.
microarray
bioconductor
RNA-Seq
R
updated 23 months ago by
Ram
44k • written 9.2 years ago by
unique379
▴ 120
6
votes
9
replies
8.2k
views
Filtering nth length from mapped SAM/BAM file.
bash
RNA-Seq
miRNAseq
shell
updated 23 months ago by
Ram
44k • written 9.2 years ago by
unique379
▴ 120
0
votes
1
reply
8.2k
views
Comment:
Comment: Filtering nth length from mapped SAM/BAM file.
updated 23 months ago by
Ram
44k • written 9.2 years ago by
unique379
▴ 120
0
votes
1
reply
8.2k
views
Comment:
Comment: Filtering nth length from mapped SAM/BAM file.
updated 23 months ago by
Ram
44k • written 9.2 years ago by
unique379
▴ 120
0
votes
2
replies
4.1k
views
Comment:
Comment: miRNA-target network construction packages in R and Bioconductor ??
updated 2.3 years ago by
Ram
44k • written 9.5 years ago by
unique379
▴ 120
0
votes
0
replies
4.1k
views
Comment:
C: miRNA-target network construction packages in R and Bioconductor ??
9.5 years ago by
unique379
▴ 120
2
votes
7
replies
4.1k
views
miRNA-target network construction packages in R and Bioconductor ??
R
Bioconductor
updated 2.3 years ago by
Ram
44k • written 9.5 years ago by
unique379
▴ 120
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