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0
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1
reply
32k
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Comment:
C: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
6.5 years ago by
chen
★ 2.5k
0
votes
0
replies
4.6k
views
Answer:
A: Call for requirement: a fast all-in-one FASTQ preprocessor (in C++, multi-thread
6.5 years ago by
chen
★ 2.5k
0
votes
0
replies
4.6k
views
Comment:
C: Call for requirement: a fast all-in-one FASTQ preprocessor (in C++, multi-thread
6.5 years ago by
chen
★ 2.5k
0
votes
1
reply
4.6k
views
Comment:
C: Call for requirement: a fast all-in-one FASTQ preprocessor (in C++, multi-thread
6.5 years ago by
chen
★ 2.5k
2
votes
0
replies
3.3k
views
Tutorial:
use the tool slicer to split big files (like FASTQ) to smaller files for parallel processing
opengene
slicer
fastq
splitter
updated 10 months ago by
Ram
43k • written 6.6 years ago by
chen
★ 2.5k
0
votes
1
reply
2.2k
views
Comment:
A: Adaptor trimming issue
6.6 years ago by
chen
★ 2.5k
0
votes
0
replies
5.2k
views
Answer:
A: extracting the exons coordinates on hg38
6.6 years ago by
chen
★ 2.5k
1
vote
1
reply
1.9k
views
Answer:
A: Good pratice for clinical NGS data pipelines
6.6 years ago by
chen
★ 2.5k
0
votes
0
replies
3.2k
views
Answer:
A: how to get exact break point in COSMIC fusion gene?
6.6 years ago by
chen
★ 2.5k
0
votes
0
replies
1.7k
views
Answer:
A: If it's possible for R detecting the reverse compliment sequence?
6.6 years ago by
chen
★ 2.5k
0
votes
0
replies
1.4k
views
Answer:
A: What is the best way to store clinical and genomic data
6.7 years ago by
chen
★ 2.5k
0
votes
1
reply
2.6k
views
Answer:
A: Open source projects in next generation sequencing
updated 6.7 years ago by
GenoMax
142k • written 6.7 years ago by
chen
★ 2.5k
2
votes
6
replies
2.4k
views
Any tool to output unmapped or mapped_with_clips reads from a BAM to two fastq files for PE data?
unmapped
BAM
fastq
updated 6.7 years ago by
Pierre Lindenbaum
161k • written 6.7 years ago by
chen
★ 2.5k
0
votes
2
replies
2.4k
views
Comment:
C: Any tool to output unmapped or mapped_with_clips reads from a BAM to two fastq f
6.7 years ago by
chen
★ 2.5k
1
vote
1
reply
3.9k
views
Tool:
GeneFuse: gene fusion detection and visualization with interactive HTML report
fusion
GeneFuse
OpenGene
updated 10 months ago by
Ram
43k • written 6.7 years ago by
chen
★ 2.5k
0
votes
0
replies
3.1k
views
Answer:
A: Trim Primers from FASTQ file
6.7 years ago by
chen
★ 2.5k
1
vote
0
replies
5.7k
views
Answer:
A: Demultiplexing bcl files into fastq files
6.7 years ago by
chen
★ 2.5k
0
votes
0
replies
11k
views
Comment:
C: PhD in bioinformatics or biostatistics as a wet-lab scientist?
6.7 years ago by
chen
★ 2.5k
0
votes
0
replies
6.6k
views
Comment:
C: weird insert size post trimming
6.7 years ago by
chen
★ 2.5k
0
votes
1
reply
11k
views
Answer:
A: PhD in bioinformatics or biostatistics as a wet-lab scientist?
6.7 years ago by
chen
★ 2.5k
0
votes
0
replies
6.6k
views
Answer:
A: weird insert size post trimming
6.7 years ago by
chen
★ 2.5k
1
vote
1
reply
3.9k
views
Comment:
C: Mutect 2 on WGS data takes too long to run
6.7 years ago by
chen
★ 2.5k
0
votes
0
replies
2.8k
views
Answer:
A: How do we measure and report the quality of next generation sequencing?
6.7 years ago by
chen
★ 2.5k
1
vote
1
reply
3.9k
views
Answer:
A: Mutect 2 on WGS data takes too long to run
6.7 years ago by
chen
★ 2.5k
1
vote
0
replies
3.4k
views
Answer:
A: trim adaptors RNA-seq
6.7 years ago by
chen
★ 2.5k
0
votes
1
reply
2.8k
views
Answer:
A: Tool For Counting Adapter Dimer: I need metrics NOT trimming
6.8 years ago by
chen
★ 2.5k
0
votes
0
replies
8.2k
views
Answer:
A: AfterQC: Automatic Filtering, Trimming, Error Removing and Quality Control for f
6.8 years ago by
chen
★ 2.5k
1
vote
0
replies
32k
views
Comment:
A: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
7.0 years ago by
chen
★ 2.5k
1
vote
1
reply
8.2k
views
Comment:
C: AfterQC: Automatic Filtering, Trimming, Error Removing and Quality Control for f
7.0 years ago by
chen
★ 2.5k
1
vote
1
reply
8.2k
views
Comment:
C: AfterQC: Automatic Filtering, Trimming, Error Removing and Quality Control for f
7.0 years ago by
chen
★ 2.5k
1
vote
1
reply
8.2k
views
Comment:
C: AfterQC: Automatic Filtering, Trimming, Error Removing and Quality Control for f
7.0 years ago by
chen
★ 2.5k
2
votes
7
replies
2.9k
views
Tool:
An online cute tool to query tumor-gene data from MSK-IMPACT project
MSK-IMPACT
tumor
mutation
MSK
updated 10 months ago by
Ram
43k • written 7.0 years ago by
chen
★ 2.5k
0
votes
0
replies
2.9k
views
Comment:
C: An online cute tool to query tumor-gene data from MSK-IMPACT project
7.0 years ago by
chen
★ 2.5k
0
votes
0
replies
2.9k
views
Comment:
C: An online cute tool to query tumor-gene data from MSK-IMPACT project
7.0 years ago by
chen
★ 2.5k
0
votes
1
reply
2.9k
views
Comment:
C: A online cute tool to query tumor-gene data from MSK-IMPACT project
7.0 years ago by
chen
★ 2.5k
0
votes
0
replies
1.3k
views
Comment:
C: Assembly of two ends of the sequence
7.0 years ago by
chen
★ 2.5k
0
votes
2
replies
1.3k
views
Answer:
A: Assembly of two ends of the sequence
7.0 years ago by
chen
★ 2.5k
6
votes
7
replies
3.1k
views
Tool:
MutScan: detect and visualize target mutations by just scanning FastQ, 50X faster than normal pipelines
Mutation
FastQ
MutScan
OpenGene
updated 10 months ago by
Ram
43k • written 7.1 years ago by
chen
★ 2.5k
0
votes
0
replies
3.1k
views
Comment:
C: MutScan: detect and visualize target mutations by just scanning FastQ, 50X faste
7.1 years ago by
chen
★ 2.5k
0
votes
0
replies
3.1k
views
Comment:
C: MutScan: detect and visualize target mutations by just scanning FastQ, 50X faste
7.1 years ago by
chen
★ 2.5k
0
votes
1
reply
3.3k
views
Comment:
C: Is there a consensus that Matlab is the wrong language for open-access bioinform
7.1 years ago by
chen
★ 2.5k
0
votes
1
reply
3.3k
views
Comment:
C: Is there a consensus that Matlab is the wrong language for open-access bioinform
7.1 years ago by
chen
★ 2.5k
1
vote
1
reply
3.3k
views
Answer:
C: Is there a consensus that Matlab is the wrong language for open-access bioinform
7.1 years ago by
chen
★ 2.5k
0
votes
0
replies
3.1k
views
Comment:
C: MutScan: detect and visualize target mutations by just scanning FastQ, 50X faste
7.1 years ago by
chen
★ 2.5k
1
vote
1
reply
2.3k
views
Answer:
A: Where can I find NGS data to test alignment and SNP detection tool
7.5 years ago by
chen
★ 2.5k
16
votes
8
replies
2.1k
views
8 follow
Forum:
What are the most important unresolved problems in Bioinformatics?
bioinformatics
updated 10 months ago by
Ram
43k • written 7.6 years ago by
chen
★ 2.5k
1
vote
1
reply
3.9k
views
Answer:
A: Establishing a Bioinformatics Core Facilities
7.6 years ago by
chen
★ 2.5k
0
votes
0
replies
1.6k
views
Comment:
C: Most accurate way to measure adapters quantity in NGS illumina reads
7.6 years ago by
chen
★ 2.5k
1
vote
1
reply
1.6k
views
Answer:
A: Most accurate way to measure adapters quantity in NGS illumina reads
7.6 years ago by
chen
★ 2.5k
0
votes
0
replies
5.7k
views
Comment:
C: Is there any C API documentation for HTSLIB?
7.6 years ago by
chen
★ 2.5k
218 results • Page
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