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4
votes
4
replies
5.4k
views
Consensus reads from UMIs
deduplication UMI DNA-seq
updated 6.1 years ago by 16k • written 6.1 years ago by ▴ 110
0
votes
0
replies
2.9k
views
Comment: C: BWA mapping parameters for DNA capture sequencing protocol
6.2 years ago by graeme.thorn ▴ 110
4
votes
5
replies
2.9k
views
BWA mapping parameters for DNA capture sequencing protocol
alignment bwa dna-seq capture
6.2 years ago by graeme.thorn ▴ 110
0
votes
1
reply
2.9k
views
Comment: C: BWA mapping parameters for DNA capture sequencing protocol
6.2 years ago by graeme.thorn ▴ 110
0
votes
0
replies
1.3k
views
Comment: C: Best practice for serial variant calling
6.2 years ago by graeme.thorn ▴ 110
0
votes
1
reply
1.3k
views
Comment: C: Best practice for serial variant calling
6.2 years ago by graeme.thorn ▴ 110
0
votes
4
replies
1.3k
views
Best practice for serial variant calling
variants
6.2 years ago by graeme.thorn ▴ 110
0
votes
0
replies
1.6k
views
Varscan settings for ctdna variant calling
variants ctdna
6.4 years ago by graeme.thorn ▴ 110
3
votes
2
replies
2.0k
views
Post-filtering WES for mutation calling
mutect2 wxs wes
6.5 years ago by graeme.thorn ▴ 110
0
votes
1
reply
2.9k
views
Comment: C: Formating RNA-seq with UMIs in unmapped BAM files to UMI-tools compatible FASTQ
6.5 years ago by graeme.thorn ▴ 110
0
votes
0
replies
2.9k
views
Comment: C: Formating RNA-seq with UMIs in unmapped BAM files to UMI-tools compatible FASTQ
6.5 years ago by graeme.thorn ▴ 110
3
votes
7
replies
2.9k
views
Formating RNA-seq with UMIs in unmapped BAM files to UMI-tools compatible FASTQ files
RNA-Seq umi pre-processing
6.5 years ago by graeme.thorn ▴ 110
1
vote
0
replies
2.1k
views
Comment: C: How do I download TCGA SNV data for patients with ER+/HER2- breast cancer?
6.5 years ago by graeme.thorn ▴ 110
2
votes
2
replies
2.1k
views
How do I download TCGA SNV data for patients with ER+/HER2- breast cancer?
tcga snp
updated 6.5 years ago by 89k • written 6.5 years ago by ▴ 110
1
vote
0
replies
2.4k
views
Answer: A: Filtering IonTorrent variant caller VCFs
6.5 years ago by graeme.thorn ▴ 110
1
vote
3
replies
2.4k
views
Filtering IonTorrent variant caller VCFs
iontorrent variants vcf
6.5 years ago by graeme.thorn ▴ 110
0
votes
0
replies
2.4k
views
Comment: C: Filtering IonTorrent variant caller VCFs
6.5 years ago by graeme.thorn ▴ 110
0
votes
0
replies
2.8k
views
Answer: A: Variant calling using IonTorrent caller correcting for deamination
6.6 years ago by graeme.thorn ▴ 110
0
votes
4
replies
2.8k
views
Variant calling using IonTorrent caller correcting for deamination
iontorrent variants
6.6 years ago by graeme.thorn ▴ 110
0
votes
1
reply
2.8k
views
Comment: C: Variant calling using IonTorrent caller correcting for deamination
6.6 years ago by graeme.thorn ▴ 110
0
votes
1
reply
1.1k
views
CNV calling on mapped IonTorrent reads
CNV
6.7 years ago by graeme.thorn ▴ 110
1
vote
0
replies
1.8k
views
Answer: A: IonTorrent variant calling: "Missing ZM: tags"
7.0 years ago by graeme.thorn ▴ 110
1
vote
3
replies
1.8k
views
IonTorrent variant calling: "Missing ZM: tags"
ion-torrent variants
7.0 years ago by graeme.thorn ▴ 110
0
votes
0
replies
1.8k
views
Comment: C: IonTorrent variant calling: "Missing ZM: tags"
7.0 years ago by graeme.thorn ▴ 110
0
votes
0
replies
3.0k
views
Comment: C: Downloading triple negative breast cancer data from ICGC
7.1 years ago by graeme.thorn ▴ 110
0
votes
1
reply
3.0k
views
Comment: C: Downloading triple negative breast cancer data from ICGC
7.1 years ago by graeme.thorn ▴ 110
0
votes
4
replies
3.0k
views
Downloading triple negative breast cancer data from ICGC
RNA-Seq icgc
7.1 years ago by graeme.thorn ▴ 110
4
votes
1
reply
2.2k
views
TCGA (legacy) barcodes for identifying tumour/normal samples
RNA-Seq
7.2 years ago by graeme.thorn ▴ 110
4
votes
0
replies
2.2k
views
Answer: A: TCGA (legacy) barcodes for identifying tumour/normal samples
7.2 years ago by graeme.thorn ▴ 110
5
votes
2
replies
2.4k
views
Split bed file by unique first three columns
bedtools bed split
updated 8.0 years ago by 166k • written 8.0 years ago by ▴ 110
0
votes
1
reply
4.1k
views
Comment: C: bedtools intersect "complete outer join"
8.0 years ago by graeme.thorn ▴ 110
3
votes
3
replies
4.1k
views
bedtools intersect "complete outer join"
bedtools
updated 8.0 years ago by 36k • written 8.0 years ago by ▴ 110
10
votes
5
replies
3.5k
views
Extracting nucleotide immediately prior to mapped read
RNA-Seq sequence
updated 3.2 years ago by 45k • written 9.7 years ago by ▴ 110
2
votes
5
replies
5.2k
views
Error in GSNAP - unable to find genome in directory
gmap gsnap
updated 3.1 years ago by 45k • written 9.8 years ago by ▴ 110
1
vote
0
replies
5.2k
views
Answer: A: Error in GSNAP - unable to find genome in directory
9.8 years ago by graeme.thorn ▴ 110
0
votes
0
replies
5.2k
views
Comment: C: Error in GSNAP - unable to find genome in directory
9.8 years ago by graeme.thorn ▴ 110
0
votes
0
replies
5.2k
views
Comment: C: Error in GSNAP - unable to find genome in directory
9.8 years ago by graeme.thorn ▴ 110
87 results • Page 2 of 2
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