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19k
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Answer: A: How To Randomly Sample A Subset Of Lines From A Bed File
4.7 years ago by cjgunase ▴ 50
0
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1
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73k
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Comment: Comment: How To Convert Gencode Gtf Into Bed Format ?
updated 3.8 years ago by 154k • written 4.7 years ago by ▴ 50
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0
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63k
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Answer: A: How To Write Data In A Granges Object To A Bed File.
updated 4.8 years ago by 13k • written 4.8 years ago by ▴ 50
0
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1
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2.0k
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Analysing RNA-seq data and whole genome bisulfite seq data on same tissues (multi-read out sequencing data)
RNA-Seq sequencing next-gen bisufite-seq
updated 7.6 years ago by ▴ 20 • written 8.1 years ago by ▴ 50
0
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1
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1.6k
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USCS visualization track for genomic bins
ucsc genome browser visualization
updated 7.8 years ago by ▴ 60 • written 7.9 years ago by ▴ 50
0
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1
reply
1.3k
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LD Plot like diagram to cluster genomic regions (bins)
LD Plot sequential correlation
7.9 years ago by cjgunase ▴ 50
1
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0
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19k
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Comment: Comment: samtools: writing to standard output failed: Broken pipe
updated 3.9 years ago by 45k • written 8.0 years ago by ▴ 50
0
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0
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1.4k
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SNP calling for whole genome bisulfite sequencing data as a quality control step
bisulfite-sequencing next-gen sequence
8.0 years ago by cjgunase ▴ 50
0
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1
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4.0k
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Comment: C: Very low Bisulfite seq mapping efficiency (~0%) for paired end.
8.1 years ago by cjgunase ▴ 50
0
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0
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4.0k
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Comment: C: Very low Bisulfite seq mapping efficiency (~0%) for paired end.
8.1 years ago by cjgunase ▴ 50
0
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1
reply
4.0k
views
Comment: C: Very low Bisulfite seq mapping efficiency (~0%) for paired end.
8.1 years ago by cjgunase ▴ 50
0
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0
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1.4k
views
is it possible to do alignment using only the reverse strand as single end ?
dna-seq alignment bismark
8.1 years ago by cjgunase ▴ 50
0
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1
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4.0k
views
Comment: C: Very low Bisulfite seq mapping efficiency (~0%) for paired end.
8.1 years ago by cjgunase ▴ 50
1
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8
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4.0k
views
Very low Bisulfite seq mapping efficiency (~0%) for paired end.
bisulfite-seq bismark mapping-efficiency
8.1 years ago by cjgunase ▴ 50
9
votes
12
replies
9.9k
views
How to quantify the overlapping reads in paired-end DNA sequencing to check the sequencing efficiency
sequencing
updated 8.1 years ago by 35k • written 8.1 years ago by ▴ 50
0
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1
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9.9k
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Comment: C: How to quantify the overlapping reads in paired-end DNA sequencing to check the
8.1 years ago by cjgunase ▴ 50
0
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0
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9.9k
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Comment: C: How to quantify the overlapping reads in paired-end DNA sequencing to check the
8.1 years ago by cjgunase ▴ 50
0
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2
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9.9k
views
Comment: C: How to quantify the overlapping reads in paired-end DNA sequencing to check the
8.1 years ago by cjgunase ▴ 50
1
vote
2
replies
2.2k
views
Display Fastq data on JBrowse
fastq Jbrowse
updated 2.7 years ago by 45k • written 9.6 years ago by ▴ 50
5
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12
replies
5.9k
views
10 follow
Is microarray gene expression analysis is dead ?
microarray gene expression
written 9.1 years ago by ▴ 50
0
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1
reply
2.2k
views
Variable selection for multiple regression from large number of predictors
gene ChIP-Seq
updated 3.3 years ago by 45k • written 9.9 years ago by ▴ 50
1
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0
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2.0k
views
what are good publications in gene regulatory network domain which need implementation ?
gene-regulation software network
updated 3.3 years ago by 45k • written 10.0 years ago by ▴ 50
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