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479
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Liftover from mm10 to CAST/PWK – Very Low Mapping Rate & Missing Chain File
Liftover
updated 3 months ago by 154k • written 3 months ago by ▴ 10
0
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1
reply
547
views
Why Is My Uniquely Mapped Read Count Higher in Samtools Compared to Bowtie2?
Bowtie2
updated 9 months ago by 103k • written 9 months ago by ▴ 10
1
vote
2
replies
923
views
Problem in count Matrix from Featurecount
countMatrix Featurecount BAM
updated 12 months ago by 154k • written 12 months ago by ▴ 10
0
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0
replies
419
views
Intersect between bedGraph and bed file
count bedtools bedGraph Matrix
12 months ago by daffodil ▴ 10
4
votes
2
replies
829
views
Problem in calling peak by MACS3
MACS3
updated 12 months ago by 90k • written 13 months ago by ▴ 10
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0
replies
468
views
ucsc table browser
ucsc
13 months ago by daffodil ▴ 10
0
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0
replies
390
views
Pausin index for qpro-seq
pausing qpro-seq index
13 months ago by daffodil ▴ 10
0
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0
replies
766
views
Comment: Comment: Clarification on UMI Length in FASTQ File after Trimming with fastp
updated 13 months ago by 154k • written 13 months ago by ▴ 10
0
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2
replies
766
views
Clarification on UMI Length in FASTQ File after Trimming with fastp
umi adapter
updated 13 months ago by 154k • written 13 months ago by ▴ 10
0
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1
reply
1.2k
views
Comment: Comment: Different result by bowtie2
13 months ago by daffodil ▴ 10
3
votes
4
replies
1.2k
views
Different result by bowtie2
Bowtie2
updated 13 months ago by 154k • written 14 months ago by ▴ 10
0
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0
replies
404
views
The discrepancy between the bowtie2 alignment summary and the samtools flagstat
bowtie2 alignment summary
updated 15 months ago by 154k • written 15 months ago by ▴ 10
0
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0
replies
320
views
qPRO-Seq analysis
qpro
15 months ago by daffodil ▴ 10
0
votes
0
replies
453
views
Homer motif analysis
Homer
18 months ago by daffodil ▴ 10
1
vote
2
replies
1.4k
views
Error during demultiplexing by bcl2fastq
bcl2fastq
updated 19 months ago by 154k • written 19 months ago by ▴ 10
0
votes
1
reply
772
views
MACS3 or SEACR
MACS3 SEACR
updated 19 months ago by ★ 19k • written 19 months ago by ▴ 10
0
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0
replies
445
views
Motif analysis by HOMER
Homer
20 months ago by daffodil ▴ 10
0
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0
replies
1.7k
views
Comment: Comment: RNA_seq
updated 20 months ago by 154k • written 20 months ago by ▴ 10
0
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2
replies
1.7k
views
Comment: Comment: RNA_seq
updated 20 months ago by 45k • written 20 months ago by ▴ 10
0
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2
replies
1.7k
views
Comment: Comment: RNA_seq
20 months ago by daffodil ▴ 10
0
votes
9
replies
1.7k
views
RNA_seq
RNA-seq
updated 20 months ago by 15k • written 20 months ago by ▴ 10
0
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1
reply
1.1k
views
Comment: Comment: Spearman correlation for ATAC data
20 months ago by daffodil ▴ 10
2
votes
3
replies
1.1k
views
Spearman correlation for ATAC data
correlation Spearman
updated 20 months ago by ▴ 220 • written 20 months ago by ▴ 10
1
vote
2
replies
996
views
Normalization of Bigwig file
ATAC BigWig
updated 21 months ago by 45k • written 21 months ago by ▴ 10
0
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0
replies
2.8k
views
Comment: Comment: Bowtie alignment
21 months ago by daffodil ▴ 10
0
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1
reply
2.8k
views
Comment: Comment: Bowtie alignment
updated 21 months ago by 154k • written 21 months ago by ▴ 10
0
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1
reply
2.8k
views
Comment: Comment: Bowtie alignment
21 months ago by daffodil ▴ 10
0
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0
replies
2.8k
views
Comment: Comment: Bowtie alignment
21 months ago by daffodil ▴ 10
1
vote
14
replies
2.8k
views
Bowtie alignment
Bowtie2 singletons
21 months ago by daffodil ▴ 10
0
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2
replies
2.8k
views
Comment: Comment: Bowtie alingment
21 months ago by daffodil ▴ 10
0
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0
replies
2.8k
views
Comment: Comment: Bowtie alingment
21 months ago by daffodil ▴ 10
0
votes
1
reply
1.9k
views
Comment: Comment: Adapter Removing
21 months ago by daffodil ▴ 10
0
votes
0
replies
1.9k
views
Comment: Comment: Adapter Removing
21 months ago by daffodil ▴ 10
3
votes
8
replies
1.9k
views
Adapter Removing
FastQC
updated 21 months ago by ▴ 360 • written 21 months ago by ▴ 10
0
votes
1
reply
1.9k
views
Comment: Comment: Adapter Removing
21 months ago by daffodil ▴ 10
0
votes
1
reply
1.9k
views
Comment: Comment: Adapter Removing
21 months ago by daffodil ▴ 10
1
vote
1
reply
601
views
Markduplicated picard
picard
updated 21 months ago by 154k • written 21 months ago by ▴ 10
0
votes
0
replies
717
views
Comment: Comment: bcl2fastq
21 months ago by daffodil ▴ 10
0
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0
replies
1.6k
views
Comment: Comment: Generate BED file
21 months ago by daffodil ▴ 10
0
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1
reply
1.6k
views
Comment: Comment: Generate BED file
21 months ago by daffodil ▴ 10
5
votes
5
replies
1.6k
views
Generate BED file
bed
21 months ago by daffodil ▴ 10
1
vote
2
replies
717
views
bcl2fastq
bcl2fstq
21 months ago by daffodil ▴ 10
0
votes
0
replies
413
views
genomation
R genomation
updated 21 months ago by 45k • written 21 months ago by ▴ 10
0
votes
0
replies
695
views
BigWig file Normalization
Bigwig file
22 months ago by daffodil ▴ 10
0
votes
0
replies
3.3k
views
Comment: Comment: BedGraph file
22 months ago by daffodil ▴ 10
0
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0
replies
3.3k
views
Comment: Comment: BedGraph file
22 months ago by daffodil ▴ 10
0
votes
1
reply
3.3k
views
Comment: Comment: BedGraph file
22 months ago by daffodil ▴ 10
0
votes
2
replies
3.3k
views
Comment: Comment: BedGraph file
updated 22 months ago by 154k • written 22 months ago by ▴ 10
0
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2
replies
3.3k
views
Comment: Comment: BedGraph file
updated 22 months ago by 154k • written 22 months ago by ▴ 10
0
votes
1
reply
3.3k
views
Comment: Comment: BedGraph file
updated 22 months ago by 154k • written 22 months ago by ▴ 10
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