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2.1k
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450K annotation (ENSEMBL)
450K annotation
updated 3.3 years ago by 45k • written 9.9 years ago by 11k
1
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1
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4.2k
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Answer: A: The best aligner to align RNA-Seq data into mitochondria genome
10.0 years ago by Nicolas Rosewick 11k
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0
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2.0k
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Comment: C: 450K complex design
10.0 years ago by Nicolas Rosewick 11k
107
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6
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71k
views
6 follow
Insert Size And Fragment Size ?
4.0 years ago by Nicolas Rosewick 11k
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0
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8.8k
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Answer: A: Human transcriptome reference for RNASeq analysis
10.0 years ago by Nicolas Rosewick 11k
6
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11
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6.8k
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Sequence Identity : Nucleotide Resolution
sequence
updated 10.1 years ago by 20 • written 13.4 years ago by 11k
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0
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16k
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Comment: C: retrieve normalised count data from DESeq2
10.1 years ago by Nicolas Rosewick 11k
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0
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2.2k
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Comment: C: How to assess non-randomness of viral integration in the genome
10.1 years ago by Nicolas Rosewick 11k
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1
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2.2k
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Comment: Comment: How to assess non-randomness of viral integration in the genome
updated 3.2 years ago by 45k • written 10.1 years ago by 11k
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4
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2.2k
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How to assess non-randomness of viral integration in the genome
integration randomness
updated 3.2 years ago by 45k • written 10.1 years ago by 11k
5
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1
reply
3.3k
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Answer: Answer: Analysis past the differentially expressed genes: RNAseq
updated 3.2 years ago by 45k • written 10.1 years ago by 11k
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0
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2.3k
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Comment: C: How can I ask bedops element-of to add additional informations in its output ?
10.1 years ago by Nicolas Rosewick 11k
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2
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2.3k
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How can I ask bedops element-of to add additional informations in its output ?
bedops
updated 10.1 years ago by 36k • written 10.1 years ago by 11k
3
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8
replies
15k
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Tophat2 : Error: Segment-Based Junction Search Failed With Err =-11
tophat error
updated 10.2 years ago by ▴ 640 • written 13.2 years ago by 11k
0
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0
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12k
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Comment: C: What is a typical workflow to correlate methylation and expression data?
10.2 years ago by Nicolas Rosewick 11k
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0
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12k
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Comment: C: What is a typical workflow to correlate methylation and expression data?
10.2 years ago by Nicolas Rosewick 11k
1
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1
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7.7k
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Comment: Comment: sorting my data based on p-value
updated 3.1 years ago by 45k • written 10.2 years ago by 11k
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1
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3.7k
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Comment: C: More than 60000 records with unique ENSG tag in ensGene.txt.gz downloaded from U
10.2 years ago by Nicolas Rosewick 11k
1
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0
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3.2k
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Comment: C: Estimate gene flow between two populations?
10.2 years ago by Nicolas Rosewick 11k
0
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1
reply
2.8k
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Align long nanopore minion cDNA reads
nanopore alignment long-reads
updated 3.1 years ago by 45k • written 10.3 years ago by 11k
2
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1
reply
2.2k
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Comment: C: Recent RNA-Seq Analysis reviews
10.3 years ago by Nicolas Rosewick 11k
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0
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3.5k
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Comment: C: How can I make the bar graph of genes from BLAST result?
10.3 years ago by Nicolas Rosewick 11k
1
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1
reply
3.7k
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Comment: C: RNA-seq analysis without grouping data
10.3 years ago by Nicolas Rosewick 11k
0
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1
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13k
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Comment: C: Transpose a large dataset
10.3 years ago by Nicolas Rosewick 11k
0
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1
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13k
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Comment: C: Transpose a large dataset
10.3 years ago by Nicolas Rosewick 11k
0
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1
reply
13k
views
Comment: Comment: Transpose a large dataset
updated 3.1 years ago by 45k • written 10.3 years ago by 11k
0
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3
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13k
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Answer: Answer: Transpose a large dataset
updated 3.1 years ago by 45k • written 10.3 years ago by 11k
0
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0
replies
4.4k
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Answer: Answer: Bowtie 2 for circular RNAs
updated 3.1 years ago by 45k • written 10.3 years ago by 11k
1
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1
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3.6k
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Comment: C: differential expression analysis tools for single end reads
10.3 years ago by Nicolas Rosewick 11k
0
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1
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3.0k
views
Comment: Comment: Check is RNA-seq mapping (tophat) is performed ok (hg38)?
updated 3.1 years ago by 45k • written 10.3 years ago by 11k
1
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1
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3.0k
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Comment: C: Check is RNA-seq mapping (tophat) is performed ok (hg38)?
10.3 years ago by Nicolas Rosewick 11k
8
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7
replies
11k
views
Tophat: Compressed Fastq File (Gz)
tophat
updated 10.3 years ago by 20 • written 13.7 years ago by 11k
0
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1
reply
2.6k
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Polyadenylation cleavage sites detection from rRNA-depleted RNA-Seq
polyA RNA-Seq
updated 10.3 years ago by 20 • written 10.4 years ago by 11k
0
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1
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2.4k
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Comment: C: Extracting transcriptonally perturbated gene subnetworks using a list of target
10.4 years ago by Nicolas Rosewick 11k
1
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3
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2.4k
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Extracting transcriptonally perturbated gene subnetworks using a list of target genes, RNA-Seq data and pathway informations
RNA-Seq subnetwork pathway
updated 3.0 years ago by 45k • written 10.4 years ago by 11k
1
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1
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3.3k
views
Comment: C: How to visualise RNAseq baits in a genomic context
10.4 years ago by Nicolas Rosewick 11k
0
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0
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6.9k
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Comment: C: How to extract reads supporting protein-coding gene splice junctions from STAR's
10.4 years ago by Nicolas Rosewick 11k
5
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3
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6.9k
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How to extract reads supporting protein-coding gene splice junctions from STAR's SJ.out.tab output
splice STAR
updated 2.9 years ago by 45k • written 10.4 years ago by 11k
0
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1
reply
2.3k
views
450K - ChAMP : How to analyse 5-hmc data ?
champ methylation 450k
updated 2.9 years ago by 45k • written 10.4 years ago by 11k
1
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0
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3.2k
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Answer: A: RNAseq design: differential expression between sexes in several species
10.5 years ago by Nicolas Rosewick 11k
0
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0
replies
8.3k
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Comment: Comment: DESeq2 multiple factor design clarification
updated 2.9 years ago by 45k • written 10.5 years ago by 11k
0
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1
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8.3k
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Comment: C: DESeq2 multiple factor design clarification
10.5 years ago by Nicolas Rosewick 11k
0
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1
reply
8.3k
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Comment: C: DESeq2 multiple factor design clarification
10.5 years ago by Nicolas Rosewick 11k
0
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1
reply
8.3k
views
Comment: Comment: DESeq2 multiple factor design clarification
updated 2.9 years ago by 45k • written 10.5 years ago by 11k
19
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14
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8.3k
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DESeq2 multiple factor design clarification
deseq2 design
updated 2.9 years ago by 45k • written 10.5 years ago by 11k
0
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1
reply
3.2k
views
Extracting gene subnetwork from pathways using gene expression data
gene-subnetwork pathway active-module
updated 2.9 years ago by 45k • written 10.6 years ago by 11k
0
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0
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9.8k
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Comment: C: DESeq2: Error: $ operator is invalid for atomic vectors using DESeqDataSetFromMa
10.5 years ago by Nicolas Rosewick 11k
0
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1
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9.8k
views
Comment: Comment: DESeq2: Error: $ operator is invalid for atomic vectors using DESeqDataSetFromMa
updated 2.8 years ago by 45k • written 10.5 years ago by 11k
6
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4
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9.8k
views
DESeq2: Error: $ operator is invalid for atomic vectors using DESeqDataSetFromMatrix
deseq2 DESeqDataSetFromMatrix
updated 2.8 years ago by 45k • written 10.5 years ago by 11k
8
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3
replies
6.6k
views
tRNA expression analysis from RNA-Seq
tRNA RNA-Seq
updated 3.4 years ago by 45k • written 10.6 years ago by 11k
1,080 results • Page 14 of 22
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