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Comment: C: finding mutations in rna-seq transcriptome
5.5 years ago by genya35 ▴ 40
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2.9k
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Comment: C: finding mutations in rna-seq transcriptome
5.5 years ago by genya35 ▴ 40
6
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11
replies
2.9k
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finding mutations in rna-seq transcriptome
RNA-Seq
updated 5.5 years ago by ★ 2.6k • written 5.5 years ago by ▴ 40
4
votes
1
reply
3.2k
views
how to use bgzip with tabix docker image
software error
updated 5.5 years ago by ▴ 270 • written 5.5 years ago by ▴ 40
0
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1
reply
1.7k
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Comment: C: docker container for Pindel
5.5 years ago by genya35 ▴ 40
0
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3
replies
1.7k
views
docker container for Pindel
software error
5.5 years ago by genya35 ▴ 40
0
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0
replies
2.9k
views
Comment: C: samtools and docker
5.5 years ago by genya35 ▴ 40
0
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1
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2.9k
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Comment: C: samtools and docker
5.5 years ago by genya35 ▴ 40
1
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4
replies
2.9k
views
samtools and docker
software docker
updated 5.5 years ago by ★ 2.1k • written 5.5 years ago by ▴ 40
0
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1
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4.9k
views
Comment: C: how to run bioinformatics tools via docker
5.6 years ago by genya35 ▴ 40
6
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14
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4.9k
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7 follow
how to run bioinformatics tools via docker
RNA-Seq
5.6 years ago by genya35 ▴ 40
0
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1
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4.9k
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Comment: A: how to run bioinformatics tools via docker
5.6 years ago by genya35 ▴ 40
0
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1
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4.9k
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Comment: C: how to run bioinformatics tools via docker
5.6 years ago by genya35 ▴ 40
0
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1
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4.9k
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Comment: C: how to run bioinformatics tools via docker
5.6 years ago by genya35 ▴ 40
0
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1
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4.9k
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Comment: C: how to run bioinformatics tools via docker
5.6 years ago by genya35 ▴ 40
0
votes
1
reply
1.5k
views
Star-Fusion last-matching gene pairs file
RNA-Seq
updated 5.6 years ago by ▴ 390 • written 5.7 years ago by ▴ 40
0
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1
reply
1.7k
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identifying indels/novel fusions in somatic tumor/normal transcriptome RNA-seq Illumina data
next-gen
updated 6.0 years ago by 86k • written 6.0 years ago by ▴ 40
0
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0
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3.7k
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Comment: C: how to capture vcf's INFO field with bcftools
6.1 years ago by genya35 ▴ 40
1
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2
replies
3.7k
views
how to capture vcf's INFO field with bcftools
software error
updated 6.1 years ago by 158k • written 6.1 years ago by ▴ 40
0
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0
replies
2.7k
views
Comment: C: How to achieve the same alignment with HiSAT2 command line vs. HiSAT2 Galaxy
updated 6.1 years ago by 136k • written 6.1 years ago by ▴ 40
0
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1
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2.7k
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Comment: C: How to achieve the same alignment with HiSAT2 command line vs. HiSAT2 Galaxy
updated 6.1 years ago by 136k • written 6.1 years ago by ▴ 40
2
votes
5
replies
2.7k
views
How to achieve the same alignment with HiSAT2 command line vs. HiSAT2 Galaxy
RNA-Seq
updated 6.1 years ago by 104k • written 6.1 years ago by ▴ 40
0
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0
replies
14k
views
Comment: C: hisat2 command line fastq to bam
6.1 years ago by genya35 ▴ 40
0
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2
replies
14k
views
Comment: C: hisat2 command line fastq to bam
6.1 years ago by genya35 ▴ 40
2
votes
6
replies
14k
views
hisat2 command line fastq to bam
RNA-Seq
6.1 years ago by genya35 ▴ 40
1
vote
2
replies
1.5k
views
Indel detectors for Ion Torrent data
indel
updated 6.1 years ago by 86k • written 6.1 years ago by ▴ 40
0
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1
reply
3.0k
views
Comment: C: how to make a .bam file from fastQ for RNA-seq ion torrent with BBmap
6.1 years ago by genya35 ▴ 40
0
votes
1
reply
2.0k
views
Comment: C: how to make short custom reference sequence to use in RNA-seq alignment
6.1 years ago by genya35 ▴ 40
0
votes
1
reply
3.0k
views
Comment: C: how to make a .bam file from fastQ for RNA-seq ion torrent with BBmap
6.1 years ago by genya35 ▴ 40
0
votes
1
reply
2.0k
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Comment: C: how to make short custom reference sequence to use in RNA-seq alignment
6.1 years ago by genya35 ▴ 40
0
votes
5
replies
2.0k
views
how to make short custom reference sequence to use in RNA-seq alignment
reference sequence
6.1 years ago by genya35 ▴ 40
0
votes
1
reply
1.4k
views
Comment: C: how to optimize Tophat for targeted RNA data analysis
6.2 years ago by genya35 ▴ 40
2
votes
1
reply
2.3k
views
RNA STAR error on Gallaxy
star
updated 6.2 years ago by 104k • written 6.2 years ago by ▴ 40
0
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1
reply
3.0k
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Comment: C: how to make a .bam file from fastQ for RNA-seq ion torrent with BBmap
6.2 years ago by genya35 ▴ 40
0
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1
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1.4k
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Comment: C: how to optimize Tophat for targeted RNA data analysis
6.2 years ago by genya35 ▴ 40
0
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1
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1.4k
views
Comment: C: how to optimize Tophat for targeted RNA data analysis
updated 6.2 years ago by 136k • written 6.2 years ago by ▴ 40
2
votes
9
replies
1.4k
views
how to optimize Tophat for targeted RNA data analysis
RNA-Seq
updated 6.2 years ago by 86k • written 6.2 years ago by ▴ 40
0
votes
1
reply
1.4k
views
Comment: C: how to optimize Tophat for targeted RNA data analysis
6.2 years ago by genya35 ▴ 40
0
votes
1
reply
3.0k
views
Comment: C: how to make a .bam file from fastQ for RNA-seq ion torrent with BBmap
6.2 years ago by genya35 ▴ 40
0
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1
reply
3.0k
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Comment: C: how to make a .bam file from fastQ for RNA-seq ion torrent with BBmap
6.2 years ago by genya35 ▴ 40
0
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1
reply
3.0k
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Comment: C: how to make a .bam file from fastQ for RNA-seq ion torrent with BBmap
6.2 years ago by genya35 ▴ 40
0
votes
1
reply
3.0k
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Comment: C: how to make a .bam file from fastQ for RNA-seq ion torrent with BBmap
6.2 years ago by genya35 ▴ 40
0
votes
1
reply
1.9k
views
Comment: C: pindel not picking up on a lab-made gene knockout deletion
6.2 years ago by genya35 ▴ 40
0
votes
15
replies
3.0k
views
how to make a .bam file from fastQ for RNA-seq ion torrent with BBmap
RNA-Seq
6.2 years ago by genya35 ▴ 40
0
votes
2
replies
1.2k
views
Best way to align RNA unaligned .ubam files from Ion Torrent
next-gen
6.2 years ago by genya35 ▴ 40
0
votes
0
replies
1.2k
views
Answer: A: Best way to align RNA unaligned .ubam files from Ion Torrent
6.2 years ago by genya35 ▴ 40
0
votes
1
reply
1.9k
views
Comment: C: pindel not picking up on a lab-made gene knockout deletion
6.2 years ago by genya35 ▴ 40
0
votes
0
replies
1.3k
views
Comment: C: how to bypass Pindel error
6.2 years ago by genya35 ▴ 40
0
votes
2
replies
1.3k
views
how to bypass Pindel error
software error
6.2 years ago by genya35 ▴ 40
0
votes
0
replies
1.2k
views
NGS DNA and RNA QC metrics from PGM/Ion Reporter
next-gen
6.3 years ago by genya35 ▴ 40
116 results • Page 2 of 3
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