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6
votes
4
replies
5.4k
views
Where can i get library.txt file for SSPACE?
SSPACE
SPades
updated 4.9 years ago by
Naomifu
• 0 • written 8.4 years ago by
Calvin
▴ 80
0
votes
1
reply
1.7k
views
ICORN from PAGIT toolkits dose not give me the file ending in '.PerBase.stats'
ICORN
PAGIT
Assembly
Variants
updated 7.6 years ago by
dhingra.akshay
• 0 • written 8.3 years ago by
Calvin
▴ 80
0
votes
0
replies
4.7k
views
Comment:
C: TCGA RNA-seq data, a simple question.
7.8 years ago by
Calvin
▴ 80
5
votes
2
replies
4.7k
views
TCGA RNA-seq data, a simple question.
rna-seq
updated 7.8 years ago by
Adamc
▴ 680 • written 7.8 years ago by
Calvin
▴ 80
0
votes
0
replies
2.1k
views
Does TCGA cancer institute have circRNA NGS sequencing data?
TCGA
circRNA
Cancer
7.8 years ago by
Calvin
▴ 80
2
votes
4
replies
1.7k
views
What is the difference between structural RNA-derived reads and non-structural RNA-derived reads?
sRNA
updated 8.0 years ago by
Lars Juhl Jensen
11k • written 8.0 years ago by
Calvin
▴ 80
0
votes
0
replies
1.7k
views
Comment:
C: What is the difference between structural RNA-derived reads and non-structural R
8.0 years ago by
Calvin
▴ 80
0
votes
0
replies
5.0k
views
Comment:
C: About small RNA adapter trimming
8.0 years ago by
Calvin
▴ 80
0
votes
1
reply
5.0k
views
Comment:
C: About small RNA adapter trimming
8.0 years ago by
Calvin
▴ 80
0
votes
1
reply
5.0k
views
Comment:
C: About small RNA adapter trimming
8.0 years ago by
Calvin
▴ 80
3
votes
6
replies
5.0k
views
About small RNA adapter trimming
Small RNAseq
8.0 years ago by
Calvin
▴ 80
5
votes
10
replies
2.8k
views
How do people attach adapter to small RNA
Small-RNA-seq
updated 17 months ago by
Ram
44k • written 8.0 years ago by
Calvin
▴ 80
0
votes
0
replies
1.1k
views
Is anyone have experience of using BGREAP to do assembly ??
Asse
GGMAP
BGREAT
8.2 years ago by
Calvin
▴ 80
1
vote
1
reply
1.8k
views
ReapR plot - what does <contig ID> mean?
ReapR
Command
updated 8.2 years ago by
ssv.bio
▴ 200 • written 8.2 years ago by
Calvin
▴ 80
1
vote
1
reply
4.7k
views
Answer:
A: Bacterial SNP calling pipeline with SNP and indels confirmation
8.3 years ago by
Calvin
▴ 80
1
vote
0
replies
3.9k
views
Answer:
A: Trimmomatic did a massive trimming!!!
8.3 years ago by
Calvin
▴ 80
2
votes
2
replies
11k
views
Answer:
A: What is the exact definition for scaffold?
8.3 years ago by
Calvin
▴ 80
0
votes
0
replies
4.3k
views
Comment:
C: Using BWA to create input BAM files for downstream analysis
8.3 years ago by
Calvin
▴ 80
1
vote
1
reply
72k
views
Comment:
C: What is difference between soft-clipped and hard-clipped in SAM specification?
8.3 years ago by
Calvin
▴ 80
0
votes
3
replies
1.5k
views
How can we know that the alignment files (bam) contains error alignment?
alignment
updated 8.3 years ago by
kdjteda
• 0 • written 8.3 years ago by
Calvin
▴ 80
0
votes
0
replies
1.5k
views
Answer:
A: How can we know that the alignment files (bam) contains error alignment?
8.3 years ago by
Calvin
▴ 80
0
votes
1
reply
2.3k
views
Comment:
C: AlignGraph doesn't response but i have what it needs
8.4 years ago by
Calvin
▴ 80
0
votes
3
replies
2.3k
views
AlignGraph doesn't response but i have what it needs
AlignGraph
updated 8.4 years ago by
Sej Modha
5.3k • written 8.4 years ago by
Calvin
▴ 80
2
votes
4
replies
6.9k
views
Bowtie2 End-to-End or Local alignment mode, Which one i should choose for downstream bacteria SNPs and Indels calling
SNP
alignment
bowtie2
genome
indel
updated 8.5 years ago by
Devon Ryan
104k • written 8.5 years ago by
Calvin
▴ 80
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