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5
votes
19
replies
5.7k
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8 follow
Hisat2 aligner problem
RNA-Seq ChIP-Seq alignment Assembly software error
updated 21 months ago by 89k • written 6.3 years ago by ▴ 350
0
votes
0
replies
819
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Comment: Comment: Exon skipping AS pipeline
2.9 years ago by ta_awwad ▴ 350
1
vote
2
replies
819
views
Exon skipping AS pipeline
splicing RNA-Seq Alternative
2.9 years ago by ta_awwad ▴ 350
0
votes
1
reply
913
views
DEXseq batch effect removal error
RNA-Seq DEXseq R DEseq2
updated 2.9 years ago by ★ 1.9k • written 2.9 years ago by ▴ 350
0
votes
1
reply
2.0k
views
Comment: Comment: DEXSeq unable to find an inherited method for function ‘NSBS’ for signature ‘"C
3.1 years ago by ta_awwad ▴ 350
0
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0
replies
2.0k
views
Comment: Comment: DEXSeq unable to find an inherited method for function ‘NSBS’ for signature ‘"C
3.1 years ago by ta_awwad ▴ 350
0
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0
replies
2.0k
views
Comment: Comment: DEXSeq unable to find an inherited method for function ‘NSBS’ for signature ‘"C
3.1 years ago by ta_awwad ▴ 350
1
vote
5
replies
2.0k
views
DEXSeq unable to find an inherited method for function ‘NSBS’ for signature ‘"CompressedIntegerList"’
DEXSeq R Bioconductor
updated 2.8 years ago by ▴ 130 • written 3.1 years ago by ▴ 350
1
vote
1
reply
5.6k
views
Answer: Answer: How to select differential expressed genes using DeSeq2?
3.4 years ago by ta_awwad ▴ 350
0
votes
0
replies
907
views
Comment: Comment: find peaks over a set of genes
3.6 years ago by ta_awwad ▴ 350
2
votes
2
replies
907
views
find peaks over a set of genes
ChIP-seq R RNA-Seq
3.6 years ago by ta_awwad ▴ 350
0
votes
0
replies
630
views
Sankey plot for bulk RNA-seq
DEseq2 RNA-Seq R
3.9 years ago by ta_awwad ▴ 350
0
votes
0
replies
2.5k
views
Comment: C: Motif match chip-seq peaks
5.6 years ago by ta_awwad ▴ 350
0
votes
1
reply
2.5k
views
Comment: C: Motif match chip-seq peaks
5.6 years ago by ta_awwad ▴ 350
0
votes
1
reply
2.5k
views
Comment: C: Motif match chip-seq peaks
5.6 years ago by ta_awwad ▴ 350
0
votes
1
reply
2.5k
views
Comment: C: Motif match chip-seq peaks
5.6 years ago by ta_awwad ▴ 350
0
votes
1
reply
2.5k
views
Comment: C: Motif match chip-seq peaks
5.6 years ago by ta_awwad ▴ 350
0
votes
1
reply
2.5k
views
Comment: C: Motif match chip-seq peaks
5.6 years ago by ta_awwad ▴ 350
0
votes
1
reply
2.5k
views
Comment: C: Motif match chip-seq peaks
5.6 years ago by ta_awwad ▴ 350
6
votes
16
replies
2.5k
views
Motif match chip-seq peaks
ChIP-Seq sequencing
updated 5.6 years ago by 89k • written 5.6 years ago by ▴ 350
0
votes
0
replies
2.5k
views
Comment: C: Motif match chip-seq peaks
5.6 years ago by ta_awwad ▴ 350
1
vote
1
reply
980
views
how to get RNA-binding proteins in mouse
RNA-Seq ChIP-Seq CLIP-seq proteomics
5.6 years ago by ta_awwad ▴ 350
14
votes
12
replies
8.8k
views
ATAC-seq 150bp reads
next-gen ATAC-seq ChIP-Seq sequencing
updated 5.6 years ago by 13k • written 5.6 years ago by ▴ 350
0
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0
replies
8.8k
views
Comment: C: ATAC-seq 150bp reads
5.6 years ago by ta_awwad ▴ 350
0
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1
reply
8.8k
views
Comment: C: ATAC-seq 150bp reads
5.6 years ago by ta_awwad ▴ 350
0
votes
0
replies
8.8k
views
Comment: C: ATAC-seq 150bp reads
5.6 years ago by ta_awwad ▴ 350
0
votes
1
reply
8.8k
views
Comment: C: ATAC-seq 150bp reads
5.6 years ago by ta_awwad ▴ 350
0
votes
0
replies
9.6k
views
Comment: C: Tools For Analysis Allele Specific Expression In Rna-Seq Data?
5.8 years ago by ta_awwad ▴ 350
0
votes
0
replies
6.1k
views
Comment: C: Allele Specific Expression Analysis
5.8 years ago by ta_awwad ▴ 350
0
votes
1
reply
9.6k
views
Comment: C: Tools For Analysis Allele Specific Expression In Rna-Seq Data?
5.8 years ago by ta_awwad ▴ 350
0
votes
1
reply
6.1k
views
Comment: A: Allele Specific Expression Analysis
5.8 years ago by ta_awwad ▴ 350
0
votes
0
replies
5.7k
views
Comment: C: Hisat2 aligner problem
6.2 years ago by ta_awwad ▴ 350
0
votes
1
reply
5.7k
views
Comment: C: Hisat2 aligner problem
6.3 years ago by ta_awwad ▴ 350
0
votes
1
reply
5.7k
views
Comment: C: Hisat2 aligner problem
6.3 years ago by ta_awwad ▴ 350
0
votes
0
replies
5.7k
views
Comment: C: Hisat2 aligner problem
6.3 years ago by ta_awwad ▴ 350
0
votes
1
reply
5.7k
views
Comment: C: Hisat2 aligner problem
6.3 years ago by ta_awwad ▴ 350
0
votes
1
reply
5.7k
views
Comment: C: Hisat2 aligner problem
6.3 years ago by ta_awwad ▴ 350
0
votes
1
reply
5.7k
views
Comment: C: Hisat2 aligner problem
6.3 years ago by ta_awwad ▴ 350
0
votes
0
replies
1.6k
views
Comment: C: 4Cseqpipe for long-range interaction
6.5 years ago by ta_awwad ▴ 350
0
votes
2
replies
1.6k
views
4Cseqpipe for long-range interaction
R chromosome conformation captur Assembly genome
6.5 years ago by ta_awwad ▴ 350
0
votes
0
replies
3.5k
views
Comment: C: Filter Fastq file by seq
6.6 years ago by ta_awwad ▴ 350
0
votes
1
reply
3.5k
views
Comment: C: Filter Fastq file by seq
6.6 years ago by ta_awwad ▴ 350
9
votes
5
replies
3.5k
views
Filter Fastq file by seq
NGS Python R Bioconductor
6.6 years ago by ta_awwad ▴ 350
0
votes
0
replies
2.4k
views
Comment: C: RIblast output Circos plot
6.6 years ago by ta_awwad ▴ 350
1
vote
2
replies
2.4k
views
Comment: C: RIblast output Circos plot
6.6 years ago by ta_awwad ▴ 350
3
votes
7
replies
2.4k
views
RIblast output Circos plot
R RIblast circos
updated 6.6 years ago by ▴ 370 • written 6.7 years ago by ▴ 350
0
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0
replies
2.4k
views
Comment: C: RIblast output Circos plot
6.6 years ago by ta_awwad ▴ 350
2
votes
0
replies
7.8k
views
Answer: A: Convert bed12 to GFF
7.1 years ago by ta_awwad ▴ 350
4
votes
3
replies
1.6k
views
where to find hg38 CDS without UTRs
RNA-Seq genome assembly alignment
updated 7.1 years ago by 153k • written 7.1 years ago by ▴ 350
8
votes
12
replies
2.8k
views
can lnc-RNA target coding RNA?
RNA lnc-RNA mRNA
updated 7.2 years ago by 7.6k • written 7.2 years ago by ▴ 350
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