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5
votes
19
replies
4.0k
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8 follow
Hisat2 aligner problem
RNA-Seq ChIP-Seq alignment Assembly software error
updated 4 months ago by 82k • written 5.0 years ago by ▴ 340
0
votes
0
replies
469
views
Comment: Comment: Exon skipping AS pipeline
18 months ago by ta_awwad ▴ 340
1
vote
2
replies
469
views
Exon skipping AS pipeline
splicing RNA-Seq Alternative
18 months ago by ta_awwad ▴ 340
0
votes
1
reply
577
views
DEXseq batch effect removal error
RNA-Seq DEXseq R DEseq2
updated 19 months ago by ★ 1.8k • written 19 months ago by ▴ 340
0
votes
1
reply
1.3k
views
Comment: Comment: DEXSeq unable to find an inherited method for function ‘NSBS’ for signature ‘"C
20 months ago by ta_awwad ▴ 340
0
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0
replies
1.3k
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Comment: Comment: DEXSeq unable to find an inherited method for function ‘NSBS’ for signature ‘"C
20 months ago by ta_awwad ▴ 340
0
votes
0
replies
1.3k
views
Comment: Comment: DEXSeq unable to find an inherited method for function ‘NSBS’ for signature ‘"C
20 months ago by ta_awwad ▴ 340
1
vote
5
replies
1.3k
views
DEXSeq unable to find an inherited method for function ‘NSBS’ for signature ‘"CompressedIntegerList"’
DEXSeq R Bioconductor
updated 17 months ago by ▴ 130 • written 20 months ago by ▴ 340
0
votes
0
replies
3.8k
views
Answer: Answer: How to select differential expressed genes using DeSeq2?
2.1 years ago by ta_awwad ▴ 340
0
votes
0
replies
602
views
Comment: Comment: find peaks over a set of genes
2.2 years ago by ta_awwad ▴ 340
2
votes
2
replies
602
views
find peaks over a set of genes
ChIP-seq R RNA-Seq
2.2 years ago by ta_awwad ▴ 340
0
votes
0
replies
433
views
Sankey plot for bulk RNA-seq
DEseq2 RNA-Seq R
2.5 years ago by ta_awwad ▴ 340
0
votes
0
replies
1.5k
views
Comment: C: Motif match chip-seq peaks
4.2 years ago by ta_awwad ▴ 340
0
votes
1
reply
1.5k
views
Comment: C: Motif match chip-seq peaks
4.2 years ago by ta_awwad ▴ 340
0
votes
1
reply
1.5k
views
Comment: C: Motif match chip-seq peaks
4.2 years ago by ta_awwad ▴ 340
0
votes
1
reply
1.5k
views
Comment: C: Motif match chip-seq peaks
4.2 years ago by ta_awwad ▴ 340
0
votes
1
reply
1.5k
views
Comment: C: Motif match chip-seq peaks
4.2 years ago by ta_awwad ▴ 340
0
votes
1
reply
1.5k
views
Comment: C: Motif match chip-seq peaks
4.2 years ago by ta_awwad ▴ 340
0
votes
1
reply
1.5k
views
Comment: C: Motif match chip-seq peaks
4.2 years ago by ta_awwad ▴ 340
6
votes
16
replies
1.5k
views
Motif match chip-seq peaks
ChIP-Seq sequencing
updated 4.2 years ago by 82k • written 4.2 years ago by ▴ 340
0
votes
0
replies
1.5k
views
Comment: C: Motif match chip-seq peaks
4.2 years ago by ta_awwad ▴ 340
1
vote
1
reply
708
views
how to get RNA-binding proteins in mouse
RNA-Seq ChIP-Seq CLIP-seq proteomics
4.3 years ago by ta_awwad ▴ 340
14
votes
12
replies
5.6k
views
ATAC-seq 150bp reads
next-gen ATAC-seq ChIP-Seq sequencing
updated 4.3 years ago by 13k • written 4.3 years ago by ▴ 340
0
votes
0
replies
5.6k
views
Comment: C: ATAC-seq 150bp reads
4.3 years ago by ta_awwad ▴ 340
0
votes
1
reply
5.6k
views
Comment: C: ATAC-seq 150bp reads
4.3 years ago by ta_awwad ▴ 340
0
votes
0
replies
5.6k
views
Comment: C: ATAC-seq 150bp reads
4.3 years ago by ta_awwad ▴ 340
0
votes
1
reply
5.6k
views
Comment: C: ATAC-seq 150bp reads
4.3 years ago by ta_awwad ▴ 340
0
votes
0
replies
8.7k
views
Comment: C: Tools For Analysis Allele Specific Expression In Rna-Seq Data?
4.4 years ago by ta_awwad ▴ 340
0
votes
0
replies
4.4k
views
Comment: C: Allele Specific Expression Analysis
4.4 years ago by ta_awwad ▴ 340
0
votes
1
reply
8.7k
views
Comment: C: Tools For Analysis Allele Specific Expression In Rna-Seq Data?
4.4 years ago by ta_awwad ▴ 340
0
votes
1
reply
4.4k
views
Comment: A: Allele Specific Expression Analysis
4.4 years ago by ta_awwad ▴ 340
0
votes
0
replies
4.0k
views
Comment: C: Hisat2 aligner problem
4.8 years ago by ta_awwad ▴ 340
0
votes
1
reply
4.0k
views
Comment: C: Hisat2 aligner problem
5.0 years ago by ta_awwad ▴ 340
0
votes
1
reply
4.0k
views
Comment: C: Hisat2 aligner problem
5.0 years ago by ta_awwad ▴ 340
0
votes
0
replies
4.0k
views
Comment: C: Hisat2 aligner problem
5.0 years ago by ta_awwad ▴ 340
0
votes
1
reply
4.0k
views
Comment: C: Hisat2 aligner problem
5.0 years ago by ta_awwad ▴ 340
0
votes
1
reply
4.0k
views
Comment: C: Hisat2 aligner problem
5.0 years ago by ta_awwad ▴ 340
0
votes
1
reply
4.0k
views
Comment: C: Hisat2 aligner problem
5.0 years ago by ta_awwad ▴ 340
0
votes
0
replies
1.3k
views
Comment: C: 4Cseqpipe for long-range interaction
5.2 years ago by ta_awwad ▴ 340
0
votes
2
replies
1.3k
views
4Cseqpipe for long-range interaction
R chromosome conformation captur Assembly genome
5.2 years ago by ta_awwad ▴ 340
0
votes
0
replies
2.8k
views
Comment: C: Filter Fastq file by seq
5.2 years ago by ta_awwad ▴ 340
0
votes
1
reply
2.8k
views
Comment: C: Filter Fastq file by seq
5.2 years ago by ta_awwad ▴ 340
9
votes
5
replies
2.8k
views
Filter Fastq file by seq
NGS Python R Bioconductor
5.2 years ago by ta_awwad ▴ 340
0
votes
0
replies
1.6k
views
Comment: C: RIblast output Circos plot
5.3 years ago by ta_awwad ▴ 340
1
vote
2
replies
1.6k
views
Comment: C: RIblast output Circos plot
5.3 years ago by ta_awwad ▴ 340
3
votes
7
replies
1.6k
views
RIblast output Circos plot
R RIblast circos
updated 5.3 years ago by ▴ 370 • written 5.3 years ago by ▴ 340
0
votes
0
replies
1.6k
views
Comment: C: RIblast output Circos plot
5.3 years ago by ta_awwad ▴ 340
2
votes
0
replies
6.0k
views
Answer: A: Convert bed12 to GFF
5.7 years ago by ta_awwad ▴ 340
4
votes
3
replies
1.2k
views
where to find hg38 CDS without UTRs
RNA-Seq genome assembly alignment
updated 5.8 years ago by 142k • written 5.8 years ago by ▴ 340
8
votes
12
replies
1.9k
views
can lnc-RNA target coding RNA?
RNA lnc-RNA mRNA
updated 5.8 years ago by 7.5k • written 5.9 years ago by ▴ 340
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