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0
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0
replies
903
views
Planned comparison with a ridge regression.
Regression
contrast
5.2 years ago by
mforde84
★ 1.4k
1
vote
2
replies
1.5k
views
Optimal # clusters
cluster
updated 5.6 years ago by
Biostar
20 • written 7.4 years ago by
mforde84
★ 1.4k
0
votes
2
replies
2.4k
views
Interpreting level-3 TCGA methylseq data
methylseq
bisulfate
data analysis
updated 5.7 years ago by
zhaoliang0302
▴ 50 • written 7.9 years ago by
mforde84
★ 1.4k
6
votes
13
replies
3.8k
views
Hypergeometric GO analysis? and network diagram of generated GO terms
gene ontology
network diagram
visualization
updated 5.7 years ago by
Biostar
20 • written 8.0 years ago by
mforde84
★ 1.4k
0
votes
0
replies
3.9k
views
Comment:
C: [IMMEDIATE JOB OPENING] HPC Systems Administrator, Center for Research Informati
6.0 years ago by
mforde84
★ 1.4k
0
votes
1
reply
3.9k
views
Comment:
C: [IMMEDIATE JOB OPENING] HPC Systems Administrator, Center for Research Informati
6.0 years ago by
mforde84
★ 1.4k
0
votes
0
replies
3.9k
views
Comment:
C: [IMMEDIATE JOB OPENING] HPC Systems Administrator, Center for Research Informati
6.0 years ago by
mforde84
★ 1.4k
0
votes
2
replies
3.9k
views
Comment:
C: [IMMEDIATE JOB OPENING] HPC Systems Administrator, Center for Research Informati
6.0 years ago by
mforde84
★ 1.4k
0
votes
0
replies
3.9k
views
Comment:
C: [IMMEDIATE JOB OPENING] HPC Systems Administrator, Center for Research Informati
6.0 years ago by
mforde84
★ 1.4k
3
votes
5
replies
4.8k
views
Genes associated with GO term
GO
gene
updated 3.2 years ago by
Guillermo
▴ 10 • written 7.8 years ago by
mforde84
★ 1.4k
0
votes
2
replies
3.0k
views
ComBat on TCGA RNAseq data generates all NAN
ComBat
tcga
updated 6.1 years ago by
coyoung
• 0 • written 7.5 years ago by
mforde84
★ 1.4k
1
vote
0
replies
2.4k
views
Comment:
C: How to filter normalized RNA-Seq transcripts for the purpose of predicting a con
6.8 years ago by
mforde84
★ 1.4k
0
votes
1
reply
1.6k
views
Job:
Bioinformatics role becoming available at University of Chicago
genome
ngs
microarray
updated 19 months ago by
Ram
44k • written 6.9 years ago by
mforde84
★ 1.4k
4
votes
1
reply
2.9k
views
Interpretation of transcripts with retained intron
ensembl
rna-seq
updated 6.9 years ago by
Biostar
20 • written 7.1 years ago by
mforde84
★ 1.4k
2
votes
1
reply
1.6k
views
Comment:
C: How to select tumor GO terms, if I did not find any in my biological process GO
7.0 years ago by
mforde84
★ 1.4k
0
votes
1
reply
2.9k
views
Comment:
C: rsem-calculate-expression fails to open iso_res file
7.0 years ago by
mforde84
★ 1.4k
0
votes
0
replies
6.3k
views
Comment:
C: Merge fastq reads for several samples
7.0 years ago by
mforde84
★ 1.4k
2
votes
1
reply
1.6k
views
Comment:
C: How to select tumor GO terms, if I did not find any in my biological process GO
7.0 years ago by
mforde84
★ 1.4k
2
votes
0
replies
4.2k
views
Comment:
C: WES -- How come I found 40% mutations intron regions
7.0 years ago by
mforde84
★ 1.4k
0
votes
2
replies
6.3k
views
Comment:
C: Merge fastq reads for several samples
7.0 years ago by
mforde84
★ 1.4k
0
votes
1
reply
2.9k
views
Comment:
C: rsem-calculate-expression fails to open iso_res file
7.0 years ago by
mforde84
★ 1.4k
0
votes
0
replies
1.1k
views
Comment:
C: Slight confusion about trimming paired end reads in RNAseq experiment
7.0 years ago by
mforde84
★ 1.4k
0
votes
1
reply
1.1k
views
Comment:
C: Slight confusion about trimming paired end reads in RNAseq experiment
7.0 years ago by
mforde84
★ 1.4k
5
votes
4
replies
1.1k
views
Slight confusion about trimming paired end reads in RNAseq experiment
RNAseq
7.0 years ago by
mforde84
★ 1.4k
0
votes
0
replies
3.9k
views
Comment:
C: STAR index generation option --sjdbOverhang for paired-end ?
7.0 years ago by
mforde84
★ 1.4k
0
votes
1
reply
10k
views
Comment:
C: Quantile normalizing prior to or after TPM scaling?
7.0 years ago by
mforde84
★ 1.4k
0
votes
1
reply
10k
views
Comment:
C: Quantile normalizing prior to or after TPM scaling?
7.0 years ago by
mforde84
★ 1.4k
0
votes
1
reply
10k
views
Comment:
C: Quantile normalizing prior to or after TPM scaling?
7.0 years ago by
mforde84
★ 1.4k
4
votes
8
replies
10k
views
Quantile normalizing prior to or after TPM scaling?
RNAseq
normalization
updated 22 months ago by
Kevin Blighe
88k • written 7.0 years ago by
mforde84
★ 1.4k
0
votes
2
replies
2.7k
views
Gene level from transcript level expression estimate.
RNA-Seq
updated 7.0 years ago by
eu.sanisa
• 0 • written 7.1 years ago by
mforde84
★ 1.4k
0
votes
1
reply
2.5k
views
Comment:
C: Retained intron transcripts
7.1 years ago by
mforde84
★ 1.4k
3
votes
3
replies
2.5k
views
Retained intron transcripts
RNAseq
7.1 years ago by
mforde84
★ 1.4k
0
votes
1
reply
3.9k
views
Comment:
C: Differential Expression of Targeted RNA-Seq
7.1 years ago by
mforde84
★ 1.4k
0
votes
1
reply
3.9k
views
Comment:
C: Differential Expression of Targeted RNA-Seq
7.1 years ago by
mforde84
★ 1.4k
0
votes
0
replies
2.7k
views
Comment:
C: DNA-seq and RNA-seq bam from TCGA for a single sample
7.1 years ago by
mforde84
★ 1.4k
0
votes
1
reply
3.9k
views
Comment:
C: Differential Expression of Targeted RNA-Seq
7.1 years ago by
mforde84
★ 1.4k
2
votes
1
reply
2.7k
views
Answer:
C: SRA data sets and runs
7.1 years ago by
mforde84
★ 1.4k
0
votes
0
replies
2.7k
views
Answer:
A: DNA-seq and RNA-seq bam from TCGA for a single sample
7.1 years ago by
mforde84
★ 1.4k
1
vote
0
replies
2.5k
views
Comment:
C: Salmon, Getting New TPM from new, updated NumReads
7.1 years ago by
mforde84
★ 1.4k
2
votes
2
replies
2.3k
views
Answer:
A: RNA-seq quality assessment
7.1 years ago by
mforde84
★ 1.4k
0
votes
0
replies
1.8k
views
Comment:
C: Endogenous retrotransposons quantifaction from RNAseq
7.1 years ago by
mforde84
★ 1.4k
1
vote
2
replies
1.8k
views
Endogenous retrotransposons quantifaction from RNAseq
RNA-Seq
updated 7.1 years ago by
Devon Ryan
104k • written 7.1 years ago by
mforde84
★ 1.4k
2
votes
1
reply
67k
views
Answer:
A: What Are The Most Common Stupid Mistakes In Bioinformatics?
7.2 years ago by
mforde84
★ 1.4k
0
votes
0
replies
67k
views
Answer:
A: What Are The Most Common Stupid Mistakes In Bioinformatics?
7.2 years ago by
mforde84
★ 1.4k
2
votes
1
reply
67k
views
Answer:
A: What Are The Most Common Stupid Mistakes In Bioinformatics?
7.2 years ago by
mforde84
★ 1.4k
2
votes
0
replies
67k
views
Answer:
A: What Are The Most Common Stupid Mistakes In Bioinformatics?
7.2 years ago by
mforde84
★ 1.4k
0
votes
1
reply
1.7k
views
Comment:
C: Which of my mutations are SNPs? Is there an R package to annotate them?
7.2 years ago by
mforde84
★ 1.4k
0
votes
1
reply
1.7k
views
Comment:
C: Which of my mutations are SNPs? Is there an R package to annotate them?
7.2 years ago by
mforde84
★ 1.4k
1
vote
1
reply
8.8k
views
Comment:
C: Resources for gene signature creation
7.2 years ago by
mforde84
★ 1.4k
1
vote
1
reply
8.8k
views
Comment:
C: Resources for gene signature creation
7.2 years ago by
mforde84
★ 1.4k
232 results • Page
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