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15
votes
25
replies
9.0k
views
Table browser +/- 2Kb of TSS export
UCSC table broswer
updated 8.5 years ago by ▴ 200 • written 8.5 years ago by ▴ 420
0
votes
0
replies
9.0k
views
Comment: C: Table browser +/- 2Kb of TSS export
8.5 years ago by rbronste ▴ 420
0
votes
1
reply
1.9k
views
Comment: C: Depleting CTCF sites from interval file
8.5 years ago by rbronste ▴ 420
0
votes
1
reply
12k
views
Comment: C: How to get promoter coordinates of hg19 from UCSC genome browser ?
8.5 years ago by rbronste ▴ 420
1
vote
0
replies
2.5k
views
Comment: C: Bedops --difference errors
8.5 years ago by rbronste ▴ 420
0
votes
1
reply
2.5k
views
Comment: C: Bedops --difference errors
8.5 years ago by rbronste ▴ 420
0
votes
1
reply
2.5k
views
Comment: C: Bedops --difference errors
8.5 years ago by rbronste ▴ 420
4
votes
6
replies
2.5k
views
Bedops --difference errors
ChIP-Seq bedops
updated 8.5 years ago by 36k • written 8.5 years ago by ▴ 420
0
votes
1
reply
1.9k
views
Comment: C: Depleting CTCF sites from interval file
8.5 years ago by rbronste ▴ 420
0
votes
1
reply
9.1k
views
Comment: C: Blacklisted regions for mm10
8.5 years ago by rbronste ▴ 420
6
votes
6
replies
1.9k
views
Depleting CTCF sites from interval file
ChIP-Seq
updated 8.5 years ago by 36k • written 8.5 years ago by ▴ 420
0
votes
0
replies
2.4k
views
Comment: C: EP300 ChIP-seq in the brain
8.5 years ago by rbronste ▴ 420
0
votes
0
replies
1.3k
views
CENTIPEDE data export question
centipede footprinting R ChIP-Seq ATAC-seq
8.6 years ago by rbronste ▴ 420
0
votes
1
reply
1.6k
views
Comment: C: awk code question
8.6 years ago by rbronste ▴ 420
7
votes
6
replies
1.6k
views
awk code question
awk
updated 8.6 years ago by 166k • written 8.6 years ago by ▴ 420
0
votes
0
replies
1.6k
views
Comment: C: awk code question
8.6 years ago by rbronste ▴ 420
1
vote
1
reply
2.0k
views
Answer: A: MACS2 Output for GREAT
8.6 years ago by rbronste ▴ 420
0
votes
0
replies
1.4k
views
Comment: C: Depleting BED file of specific regions
8.6 years ago by rbronste ▴ 420
1
vote
2
replies
1.4k
views
Depleting BED file of specific regions
sequencing ChIP-Seq
updated 8.6 years ago by 166k • written 8.6 years ago by ▴ 420
0
votes
0
replies
1.8k
views
Running RSAT motif discovery on a computing cluster
RSAT motif ChIP-Seq
8.6 years ago by rbronste ▴ 420
6
votes
5
replies
4.4k
views
Figure quality browser tracks
sequencing UCSC IGV browser
updated 8.6 years ago by ★ 2.4k • written 8.6 years ago by ▴ 420
0
votes
1
reply
4.4k
views
Comment: C: Figure quality browser tracks
8.6 years ago by rbronste ▴ 420
0
votes
2
replies
3.5k
views
Comment: C: Bed to BAM information transfer
8.7 years ago by rbronste ▴ 420
0
votes
1
reply
3.5k
views
Comment: C: Bed to BAM information transfer
8.7 years ago by rbronste ▴ 420
1
vote
1
reply
3.5k
views
Comment: C: Bed to BAM information transfer
8.7 years ago by rbronste ▴ 420
3
votes
0
replies
4.4k
views
MEME vs. HOMER for de novo and known Motif finding
meme ChIP-Seq HOMER motif
8.7 years ago by rbronste ▴ 420
0
votes
1
reply
3.5k
views
Comment: C: FIMO GFF output to standard BED
8.7 years ago by rbronste ▴ 420
0
votes
1
reply
3.5k
views
Comment: C: FIMO GFF output to standard BED
8.7 years ago by rbronste ▴ 420
4
votes
5
replies
3.5k
views
FIMO GFF output to standard BED
ChIP-Seq FIMO motif sequencing
updated 8.7 years ago by 36k • written 8.7 years ago by ▴ 420
1
vote
1
reply
1.0k
views
Intersect and limit distally
ChIP-Seq sequencing
updated 8.7 years ago by 36k • written 8.7 years ago by ▴ 420
0
votes
0
replies
1.4k
views
Alternative to PWMtools
DNase-seq gene ChIP-Seq
8.7 years ago by rbronste ▴ 420
0
votes
1
reply
2.7k
views
BAM file header error - ValueError: invalid coordinates:
software error
updated 8.7 years ago by 105k • written 8.7 years ago by ▴ 420
0
votes
0
replies
1.5k
views
Comment: C: Output file of motif instances
8.7 years ago by rbronste ▴ 420
1
vote
2
replies
1.5k
views
Output file of motif instances
HOMER motif msCENTIPEDE
updated 8.7 years ago by 12k • written 8.7 years ago by ▴ 420
0
votes
0
replies
1.6k
views
Annotating a PWM
PWM DNase-seq
8.7 years ago by rbronste ▴ 420
0
votes
1
reply
2.8k
views
Comment: C: CENTIPEDE DNase-seq analysis - ylist question
8.8 years ago by rbronste ▴ 420
0
votes
0
replies
2.8k
views
Comment: C: CENTIPEDE DNase-seq analysis - ylist question
8.8 years ago by rbronste ▴ 420
4
votes
4
replies
2.8k
views
CENTIPEDE DNase-seq analysis - ylist question
centipede DNase-seq R
updated 8.8 years ago by ★ 2.0k • written 8.8 years ago by ▴ 420
0
votes
0
replies
3.7k
views
Comment: C: bwtool matrix error - invalid signed integer
8.8 years ago by rbronste ▴ 420
0
votes
0
replies
3.7k
views
Comment: C: bwtool matrix error - invalid signed integer
updated 8.8 years ago by 166k • written 8.8 years ago by ▴ 420
0
votes
1
reply
3.4k
views
Comment: C: bwtool Installation Issues
8.8 years ago by rbronste ▴ 420
1
vote
2
replies
1.7k
views
bwtool Alternative tool
ChIP-Seq bwtool DNase-seq
8.8 years ago by rbronste ▴ 420
0
votes
3
replies
3.4k
views
bwtool Installation Issues
bwtool software error ChIP-Seq
8.8 years ago by rbronste ▴ 420
1
vote
0
replies
2.1k
views
DiffBind read-in narrowPeak file
ChIP-Seq R
8.8 years ago by rbronste ▴ 420
294 results • Page 6 of 6
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