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Comment: C: StringTie output to train Augustus
4.1 years ago by Ric ▴ 430
2
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4
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1.7k
views
StringTie output to train Augustus
gene annotation
4.1 years ago by Ric ▴ 430
0
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1
reply
9.6k
views
Comment: C: Create de novo repeat library
4.1 years ago by Ric ▴ 430
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1
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9.6k
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Comment: C: Create de novo repeat library
4.1 years ago by Ric ▴ 430
4
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5
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1.6k
views
Repeats detection in a genome
Assembly genome annotation
updated 4.1 years ago by 8.5k • written 4.1 years ago by ▴ 430
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0
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1.6k
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Comment: C: Repeats detection in a genome
4.1 years ago by Ric ▴ 430
0
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2
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927
views
sparsehash FATAL ERROR: failed to allocate 19 groups
abyss Assembly
updated 4.2 years ago by ▴ 50 • written 4.2 years ago by ▴ 430
9
votes
10
replies
4.2k
views
how to adjust BAM header after extracting only mapped reads from BAM files
bam samtools
updated 4.2 years ago by ★ 1.4k • written 6.8 years ago by ▴ 430
0
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1
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1.5k
views
Comment: C: gff3_sp_complement_annotations.pl parameter settings
4.2 years ago by Ric ▴ 430
0
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1
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1.5k
views
Comment: C: gff3_sp_complement_annotations.pl parameter settings
4.2 years ago by Ric ▴ 430
0
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7
replies
1.5k
views
gff3_sp_complement_annotations.pl parameter settings
gene annotation
4.2 years ago by Ric ▴ 430
0
votes
0
replies
1.0k
views
no unique mapped paired-end reads in BAM file
alignment ngs sequencing
4.2 years ago by Ric ▴ 430
0
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1
reply
1.1k
views
samtools merge not working
samtools alignment next-gen sequencing
updated 4.2 years ago by 161k • written 4.2 years ago by ▴ 430
0
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1
reply
2.6k
views
Comment: C: How to retrieve from a GFF3 file a AA and CDS files
4.2 years ago by Ric ▴ 430
0
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0
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1.5k
views
Comment: C: gff3_sp_complement_annotations.pl parameter settings
4.2 years ago by Ric ▴ 430
0
votes
4
replies
2.6k
views
How to retrieve from a GFF3 file a AA and CDS files
gene annotation
updated 4.3 years ago by 8.5k • written 4.3 years ago by ▴ 430
0
votes
22
replies
3.9k
views
changing ID in an existing GFF3 file
gene annotation
updated 4.3 years ago by 15k • written 4.4 years ago by ▴ 430
0
votes
1
reply
3.9k
views
Comment: C: How to retrieve from a GFF3 file a AA and CDS files
4.3 years ago by Ric ▴ 430
0
votes
0
replies
1.1k
views
Comment: C: only unique mapped paired-end reads
4.3 years ago by Ric ▴ 430
0
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1
reply
3.9k
views
Comment: C: changing ID in an existing GFF3 file
4.3 years ago by Ric ▴ 430
0
votes
1
reply
3.9k
views
Comment: C: changing ID in an existing GFF3 file
4.3 years ago by Ric ▴ 430
0
votes
1
reply
3.9k
views
Comment: C: changing ID in an existing GFF3 file
4.3 years ago by Ric ▴ 430
0
votes
1
reply
3.9k
views
Comment: C: changing ID in an existing GFF3 file
4.3 years ago by Ric ▴ 430
0
votes
1
reply
3.9k
views
Comment: C: changing ID in an existing GFF3 file
4.3 years ago by Ric ▴ 430
0
votes
1
reply
1.1k
views
Comment: C: only unique mapped paired-end reads
4.3 years ago by Ric ▴ 430
0
votes
4
replies
1.1k
views
only unique mapped paired-end reads
alignment next-gen sequence
4.3 years ago by Ric ▴ 430
0
votes
0
replies
3.9k
views
Comment: C: changing ID in an existing GFF3 file
4.3 years ago by Ric ▴ 430
0
votes
1
reply
3.9k
views
Comment: C: changing ID in an existing GFF3 file
4.3 years ago by Ric ▴ 430
0
votes
2
replies
3.9k
views
Comment: C: changing ID in an existing GFF3 file
4.3 years ago by Ric ▴ 430
0
votes
1
reply
3.9k
views
Comment: C: changing ID in an existing GFF3 file
4.3 years ago by Ric ▴ 430
0
votes
1
reply
3.9k
views
Comment: C: changing ID in an existing GFF3 file
4.3 years ago by Ric ▴ 430
1
vote
0
replies
1.7k
views
Comment: C: BBmap caused Not in GZIP format
4.3 years ago by Ric ▴ 430
2
votes
2
replies
1.7k
views
BBmap caused Not in GZIP format
bbmap sequencing
4.3 years ago by Ric ▴ 430
0
votes
0
replies
1.0k
views
Comment: C: creating tag count file
4.4 years ago by Ric ▴ 430
0
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1
reply
1.0k
views
Comment: C: creating tag count file
4.4 years ago by Ric ▴ 430
0
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0
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1.0k
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Comment: C: creating tag count file
4.4 years ago by Ric ▴ 430
0
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7
replies
1.0k
views
creating tag count file
RNA-Seq
4.4 years ago by Ric ▴ 430
0
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1
reply
1.8k
views
Comment: C: extracting unmapped reads from PAF file
4.4 years ago by Ric ▴ 430
1
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3
replies
1.8k
views
extracting unmapped reads from PAF file
alignment mapping
4.4 years ago by Ric ▴ 430
0
votes
1
reply
1.0k
views
Comment: C: creating tag count file
4.4 years ago by Ric ▴ 430
0
votes
0
replies
1.2k
views
Comment: C: intersecting two GFF3 missing data from the second file
4.4 years ago by Ric ▴ 430
0
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1
reply
1.2k
views
Comment: C: intersecting two GFF3 missing data from the second file
4.4 years ago by Ric ▴ 430
1
vote
3
replies
8.0k
views
counting the number of reads in FASTQ files
next-gen sequencing coverage
updated 4.5 years ago by 14k • written 4.5 years ago by ▴ 430
0
votes
1
reply
18k
views
Comment: C: BWA mem on multiple samples
updated 4.5 years ago by 43k • written 8.6 years ago by ▴ 430
0
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5
replies
1.2k
views
intersecting two GFF3 missing data from the second file
annotation bedtools genome
4.5 years ago by Ric ▴ 430
0
votes
1
reply
842
views
Removing adapters for assembly
abyss assembly
updated 4.5 years ago by ★ 27k • written 4.5 years ago by ▴ 430
1
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2
replies
1.6k
views
average distance between genes
assembly gene annotation
updated 4.5 years ago by 35k • written 4.7 years ago by ▴ 430
0
votes
0
replies
568
views
Braker2 with filtered BAM files
assembly gene sequencing rna-seq
4.5 years ago by Ric ▴ 430
0
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0
replies
8.7k
views
Comment: C: Ignore Reads In Bwa
updated 4.6 years ago by 43k • written 12.1 years ago by ▴ 430
3
votes
2
replies
1.4k
views
StringTie to GFF3
gene assembly RNA-Seq
updated 4.6 years ago by 8.5k • written 4.6 years ago by ▴ 430
292 results • Page 2 of 6
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