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Comment: C: Matching methylation and expression with only 2 samples
7.5 years ago by Pin.Bioinf ▴ 350
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2
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1.3k
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Matching methylation and expression with only 2 samples
RNA-Seq integrating correlations methyl-seq
7.5 years ago by Pin.Bioinf ▴ 350
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1
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2.4k
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Comment: A: Correlating methylation and expression do i need normalization?
7.5 years ago by Pin.Bioinf ▴ 350
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1
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1.8k
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match CpG positions to genes
Meth-Seq CpG Epigenomics RNA-Seq
updated 7.5 years ago by 105k • written 7.5 years ago by ▴ 350
5
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2
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2.8k
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ggplot scatterplot and lines
ggplot scatterplot
updated 7.5 years ago by ★ 2.4k • written 7.5 years ago by ▴ 350
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1
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1.3k
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lncRNA expression association to gene
lncRNA RNA
updated 7.5 years ago by 89k • written 7.5 years ago by ▴ 350
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1
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2.0k
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Comment: C: Differential methylation with 1 sample only
7.5 years ago by Pin.Bioinf ▴ 350
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1.8k
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Comment: C: Coverage of methylation txt files
7.6 years ago by Pin.Bioinf ▴ 350
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2.7k
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Answer: A: Deseq2 results have too many genes
7.6 years ago by Pin.Bioinf ▴ 350
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2
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1.8k
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Coverage of methylation txt files
methylation bismark coverage
7.6 years ago by Pin.Bioinf ▴ 350
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1.7k
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How to proceed from these methylation .txt files?
methylation R
updated 7.6 years ago by ▴ 730 • written 7.6 years ago by ▴ 350
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0
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1.4k
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What happened to my mapping IDs in the matrix counts?
RNA-Seq R mapping quantification
7.6 years ago by Pin.Bioinf ▴ 350
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6
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2.0k
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Problem bam files 0 counts
RNA-Seq mapping counts
7.6 years ago by Pin.Bioinf ▴ 350
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2.0k
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Comment: A: Problem bam files 0 counts
7.6 years ago by Pin.Bioinf ▴ 350
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2.0k
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Comment: C: Problem bam files 0 counts
updated 7.6 years ago by 45k • written 7.6 years ago by ▴ 350
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2.4k
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Gene pathway analysis of my list of genes
pathway R genes enrichment
updated 7.6 years ago by 153k • written 7.6 years ago by ▴ 350
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1.4k
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Lux oxBS-seq and BS-seq quantificator of 5mc and 5hmC. Which are the input files?
bs-seq bisulfite bismark lux
7.7 years ago by Pin.Bioinf ▴ 350
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1.2k
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Which bioinformatics procedure is followed to infer 5hmC levels by comparison with a BS-seq run?
BS-Seq 5hmC
7.7 years ago by Pin.Bioinf ▴ 350
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1
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1.7k
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Where can I find bisulfite sample data to practice trimming, mapping and methylation call? Im new in this field
bisulfite BS-RNA-Seq methylation
updated 7.7 years ago by ★ 3.0k • written 7.7 years ago by ▴ 350
2
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2
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1.2k
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RNA-Seq AUTOMATIC workflows available/ make your own
RNA-Seq
7.7 years ago by Pin.Bioinf ▴ 350
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1
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7.1k
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Comment: C: Is it possible to find a human genome STAR index to not have to create it on my
7.7 years ago by Pin.Bioinf ▴ 350
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1
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7.1k
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Comment: C: Is it possible to find a human genome STAR index to not have to create it on my
7.7 years ago by Pin.Bioinf ▴ 350
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0
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1.1k
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What classifying or clustering tools should I apply for an exhaustive gene expression analysis?
RNA-Seq R gene
8.4 years ago by Pin.Bioinf ▴ 350
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3.2k
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Comment: C: Differential expression analysis 5 conditions 3 replicates each matrix counts
8.4 years ago by Pin.Bioinf ▴ 350
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1
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3.2k
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Comment: C: Differential expression analysis 5 conditions 3 replicates each matrix counts
updated 8.4 years ago by 105k • written 8.4 years ago by ▴ 350
0
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0
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3.2k
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Comment: C: Differential expression analysis 5 conditions 3 replicates each matrix counts
8.4 years ago by Pin.Bioinf ▴ 350
5
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6
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3.2k
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Differential expression analysis 5 conditions 3 replicates each matrix counts
RNA-Seq
updated 8.4 years ago by 105k • written 8.4 years ago by ▴ 350
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