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306
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Deconvolution: bulk and cell signature data from different platforms or technologies
CIBERSORT RNASeq Microarray deconvolution signature
5 months ago by zhang.jianhai ▴ 30
0
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0
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914
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Comment: Comment: Single-cell RNA Seq on whole organ or whole tissue with known cell origins
2.9 years ago by zhang.jianhai ▴ 30
1
vote
2
replies
914
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Single-cell RNA Seq on whole organ or whole tissue with known cell origins
known-cell-origin whole-organ single-cell-RNA-Seq whole-tissue
2.9 years ago by zhang.jianhai ▴ 30
0
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1
reply
829
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Filter RNA-seq matrix
rna-seq cv
updated 4.5 years ago by 20 • written 4.5 years ago by ▴ 30
0
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0
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3.4k
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Comment: C: RPKM/CPM/FPKM to log2 units
4.6 years ago by zhang.jianhai ▴ 30
0
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1
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3.4k
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Comment: C: RPKM/CPM/FPKM to log2 units
4.6 years ago by zhang.jianhai ▴ 30
5
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4
replies
3.4k
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RPKM/CPM/FPKM to log2 units
RPKM log2
updated 4.6 years ago by ★ 6.4k • written 4.6 years ago by ▴ 30
0
votes
0
replies
597
views
Gene network module identification methods
gene network module
4.6 years ago by zhang.jianhai ▴ 30
0
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10
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5.0k
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functional enichment with custom gene annotation
enrichment
updated 4.6 years ago by ▴ 140 • written 4.7 years ago by ▴ 30
0
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0
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906
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Comment: C: Well studied gene networks/pathways in rice
4.6 years ago by zhang.jianhai ▴ 30
0
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1
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5.0k
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Comment: C: functional enichment with custom gene annotation
4.6 years ago by zhang.jianhai ▴ 30
0
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0
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5.0k
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Comment: C: functional enichment with custom gene annotation
4.6 years ago by zhang.jianhai ▴ 30
1
vote
4
replies
906
views
Well studied gene networks/pathways in rice
pathway rice
4.6 years ago by zhang.jianhai ▴ 30
0
votes
1
reply
906
views
Comment: C: Well studied networks/pathways in rice
4.6 years ago by zhang.jianhai ▴ 30
0
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1
reply
5.0k
views
Comment: C: functional enichment with custom gene annotation
4.6 years ago by zhang.jianhai ▴ 30
0
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0
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5.0k
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Comment: C: functional enichment with custom gene annotation
4.6 years ago by zhang.jianhai ▴ 30
0
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1
reply
817
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Enrichment of pathways, reactome, known networks in rice
pathway reactome known networks rice
4.7 years ago by zhang.jianhai ▴ 30
0
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1
reply
2.0k
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Comment: C: Network construction methods using Bayesian Network or mutual information
5.4 years ago by zhang.jianhai ▴ 30
0
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0
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1.3k
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Comment: C: Partial correlation matrix and gene cluster
5.4 years ago by zhang.jianhai ▴ 30
2
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6
replies
2.0k
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Network construction methods using Bayesian Network or mutual information
gene network Bayesian network mutual information
5.4 years ago by zhang.jianhai ▴ 30
4
votes
2
replies
1.3k
views
Partial correlation matrix and gene cluster
partial correlation matrix gene network
updated 5.4 years ago by 27k • written 5.4 years ago by ▴ 30
0
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0
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2.5k
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Comment: C: How to plot two networks with overlapping nodes?
6.1 years ago by zhang.jianhai ▴ 30
0
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1
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2.5k
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Comment: C: How to plot two networks with overlapping nodes?
6.1 years ago by zhang.jianhai ▴ 30
1
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4
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2.5k
views
How to plot two networks with overlapping nodes?
network
6.1 years ago by zhang.jianhai ▴ 30
8
votes
14
replies
6.9k
views
7 follow
GO enrichment analysis with human ENSEMBL ids
R RNA-Seq ensembl GO enrichment edgeR
updated 7.1 years ago by • 0 • written 7.2 years ago by ▴ 30
0
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1
reply
2.6k
views
DiffCorr: cannot run Bellman-Ford algorithm, Negative loop detected while calculating shortest paths
Pacakge DiffCorr graph clustering
updated 7.1 years ago by 27k • written 7.1 years ago by ▴ 30
0
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1
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6.9k
views
Comment: C: GO enrichment analysis with human ENSEMBL ids
7.2 years ago by zhang.jianhai ▴ 30
0
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3
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6.9k
views
Comment: A: GO enrichment analysis with human ENSEMBL ids
7.2 years ago by zhang.jianhai ▴ 30
0
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1
reply
6.9k
views
Comment: A: Mapping among ENSEMBL Entrez and RefSeq.
7.2 years ago by zhang.jianhai ▴ 30
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