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13
votes
4
replies
9.0k
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6 follow
Change rsID to chromosome:location in bim files for plink
genome snp plink
updated 6 months ago by ▴ 600 • written 4.9 years ago by ▴ 70
1
vote
2
replies
3.0k
views
How to do Tajima's D analysis?
snp genome
updated 3.1 years ago by 20 • written 6.0 years ago by ▴ 70
0
votes
0
replies
2.7k
views
Comment: C: Segmentation fault error while running extractPIRs from ShapeIT
4.6 years ago by amitgourav.ghosh12 ▴ 70
0
votes
1
reply
2.7k
views
Comment: C: Segmentation fault error while running extractPIRs from ShapeIT
4.6 years ago by amitgourav.ghosh12 ▴ 70
0
votes
0
replies
828
views
SNPduo error reading ped files
IBS genome SNPduo ped
updated 13 months ago by 43k • written 4.7 years ago by ▴ 70
0
votes
0
replies
1.5k
views
Comment: C: Replace missing SNPs of one individual with reference alleles in a VCF file
4.9 years ago by amitgourav.ghosh12 ▴ 70
0
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0
replies
1.5k
views
Comment: C: Replace missing SNPs of one individual with reference alleles in a VCF file
4.9 years ago by amitgourav.ghosh12 ▴ 70
2
votes
3
replies
1.5k
views
Replace missing SNPs of one individual with reference alleles in a VCF file
SNP bcftools VCFtools sequencing
updated 4.9 years ago by 11k • written 4.9 years ago by ▴ 70
0
votes
0
replies
5.4k
views
Comment: C: VCFtools: --window-pi and --from-bp --to-bp produces different start and ending
5.9 years ago by amitgourav.ghosh12 ▴ 70
0
votes
0
replies
4.6k
views
Comment: C: Tajima's D Using SNP data ONLY
6.0 years ago by amitgourav.ghosh12 ▴ 70
0
votes
0
replies
3.0k
views
Comment: C: How to do Tajima's D analysis?
6.0 years ago by amitgourav.ghosh12 ▴ 70
1
vote
0
replies
9.0k
views
Comment: C: How to do pca plot from .eigenval and .eigenvec files from Plink in R.
6.1 years ago by amitgourav.ghosh12 ▴ 70
0
votes
1
reply
9.0k
views
Comment: C: How to do pca plot from .eigenval and .eigenvec files from Plink in R.
6.1 years ago by amitgourav.ghosh12 ▴ 70
1
vote
1
reply
9.0k
views
Comment: C: How to do pca plot from .eigenval and .eigenvec files from Plink in R.
6.1 years ago by amitgourav.ghosh12 ▴ 70
0
votes
1
reply
9.0k
views
Comment: C: How to do pca plot from .eigenval and .eigenvec files from Plink in R.
6.1 years ago by amitgourav.ghosh12 ▴ 70
0
votes
1
reply
9.0k
views
Comment: C: How to do pca plot from .eigenval and .eigenvec files from Plink in R.
6.1 years ago by amitgourav.ghosh12 ▴ 70
0
votes
1
reply
9.0k
views
Comment: C: How to do pca plot from .eigenval and .eigenvec files from Plink in R.
6.1 years ago by amitgourav.ghosh12 ▴ 70
13
votes
13
replies
9.0k
views
How to do pca plot from .eigenval and .eigenvec files from Plink in R.
R SNP
updated 6.1 years ago by 104k • written 6.1 years ago by ▴ 70
0
votes
0
replies
4.0k
views
Comment: C: Use plink to extract data using common SNPs and merge this into one file
6.1 years ago by amitgourav.ghosh12 ▴ 70
1
vote
1
reply
4.0k
views
Comment: C: Use plink to extract data using common SNPs and merge this into one file
6.1 years ago by amitgourav.ghosh12 ▴ 70
1
vote
0
replies
2.1k
views
Answer: A: Plink error message while merging
6.1 years ago by amitgourav.ghosh12 ▴ 70
1
vote
1
reply
2.1k
views
Plink error message while merging
SNP next-gen
6.1 years ago by amitgourav.ghosh12 ▴ 70
7
votes
14
replies
4.0k
views
Use plink to extract data using common SNPs and merge this into one file
SNP sequencing
6.1 years ago by amitgourav.ghosh12 ▴ 70
0
votes
0
replies
4.0k
views
Comment: C: How to separate out overlapping data in 2 datasets and then merge the file in pl
6.1 years ago by amitgourav.ghosh12 ▴ 70
0
votes
1
reply
4.0k
views
Comment: C: How to separate out overlapping data in 2 datasets and then merge the file in pl
6.1 years ago by amitgourav.ghosh12 ▴ 70
0
votes
0
replies
4.3k
views
Comment: C: Removing SNPs with over 2% missing rate in plink
6.1 years ago by amitgourav.ghosh12 ▴ 70
4
votes
2
replies
4.3k
views
Removing SNPs with over 2% missing rate in plink
SNP
updated 6.1 years ago by ▴ 240 • written 6.1 years ago by ▴ 70
0
votes
0
replies
3.0k
views
Comment: C: How to generate text file having SNP list from bim file in plink?
6.2 years ago by amitgourav.ghosh12 ▴ 70
0
votes
1
reply
4.0k
views
Comment: C: How to separate out overlapping data in 2 datasets and then merge the file in pl
6.2 years ago by amitgourav.ghosh12 ▴ 70
0
votes
1
reply
3.0k
views
Comment: C: How to generate text file having SNP list from bim file in plink?
6.2 years ago by amitgourav.ghosh12 ▴ 70
1
vote
3
replies
3.0k
views
How to generate text file having SNP list from bim file in plink?
SNP
updated 6.2 years ago by ★ 2.7k • written 6.2 years ago by ▴ 70
0
votes
1
reply
4.0k
views
Comment: C: I am using Plink 1.9 to merge two data sets, I have found out the common SNPs am
6.2 years ago by amitgourav.ghosh12 ▴ 70
0
votes
1
reply
4.0k
views
Comment: C: I am using Plink 1.9 to merge two data sets, I have found out the common SNPs am
6.2 years ago by amitgourav.ghosh12 ▴ 70
33 results • Page 1 of 1
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