Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
0
votes
0
replies
448
views
Comment:
Comment: featurecounts not working on mirbase annotation file
5 months ago by
demoraesdiogo2017
▴ 100
0
votes
2
replies
448
views
featurecounts not working on mirbase annotation file
usegalaxy
miRNA-seq
5 months ago by
demoraesdiogo2017
▴ 100
0
votes
0
replies
398
views
Comment:
Comment: No counts in my RNA-seq data
9 months ago by
demoraesdiogo2017
▴ 100
1
vote
2
replies
398
views
No counts in my RNA-seq data
sRNA
e.coli
9 months ago by
demoraesdiogo2017
▴ 100
3
votes
2
replies
451
views
carp reads in my bacterial small RNome
rna-seq
updated 9 months ago by
colindaven
5.7k • written 9 months ago by
demoraesdiogo2017
▴ 100
0
votes
0
replies
610
views
Comment:
Comment: mirbase does not have miRNA annotation of my species, what are the alternatives?
10 months ago by
demoraesdiogo2017
▴ 100
3
votes
3
replies
610
views
mirbase does not have miRNA annotation of my species, what are the alternatives?
mirbase
mirna-seq
10 months ago by
demoraesdiogo2017
▴ 100
0
votes
0
replies
296
views
maximum fastq file size in galaxy?
fastq
rna-seq
usegalaxy
10 months ago by
demoraesdiogo2017
▴ 100
0
votes
0
replies
612
views
Comment:
Comment: more than one sample in the same fasta file
10 months ago by
demoraesdiogo2017
▴ 100
0
votes
1
reply
612
views
Comment:
Comment: more than one sample in the same fasta file
10 months ago by
demoraesdiogo2017
▴ 100
1
vote
5
replies
612
views
more than one sample in the same fasta file
mirnaseq
usegalaxy
10 months ago by
demoraesdiogo2017
▴ 100
3
votes
2
replies
730
views
Relative log expression normalization without negative values
rna-seq
updated 15 months ago by
ATpoint
78k • written 15 months ago by
demoraesdiogo2017
▴ 100
2
votes
3
replies
1.3k
views
96% of reads aligned to the genome, but only 40% to the transcriptome?
rnaseq
single-cell
updated 16 months ago by
ATpoint
78k • written 16 months ago by
demoraesdiogo2017
▴ 100
0
votes
1
reply
595
views
Comment:
Comment: 0% adapter bases after demultiplexing 10x data and "undetermined" sample
17 months ago by
demoraesdiogo2017
▴ 100
0
votes
3
replies
595
views
0% adapter bases after demultiplexing 10x data and "undetermined" sample
10x
BCLconvert
illumina
snrnaseq
updated 17 months ago by
GenoMax
136k • written 17 months ago by
demoraesdiogo2017
▴ 100
4
votes
5
replies
1.2k
views
how to tell if data was log transformed
UPLC
updated 22 months ago by
Mensur Dlakic
★ 25k • written 22 months ago by
demoraesdiogo2017
▴ 100
0
votes
0
replies
1.2k
views
Comment:
Comment: how to tell if data was log transformed
22 months ago by
demoraesdiogo2017
▴ 100
0
votes
0
replies
278
views
cytoescape enhancedgraphics image export bug
cytoescape
enhancedgraphics
22 months ago by
demoraesdiogo2017
▴ 100
0
votes
0
replies
444
views
3 questions about module membership vs gene significance
WGCNA
2.4 years ago by
demoraesdiogo2017
▴ 100
0
votes
0
replies
1.5k
views
Comment:
Comment: WGCNA for RNA-SEQ DATA
2.4 years ago by
demoraesdiogo2017
▴ 100
0
votes
0
replies
528
views
high resolution deconvolution problem
cibersort
deconvolution
rna-seq
2.5 years ago by
demoraesdiogo2017
▴ 100
0
votes
0
replies
721
views
Comment:
Comment: whole tissue and RNA-seq: can I still study specific cell types?
2.5 years ago by
demoraesdiogo2017
▴ 100
0
votes
1
reply
721
views
Comment:
Comment: whole tissue and RNA-seq: can I still study specific cell types?
2.5 years ago by
demoraesdiogo2017
▴ 100
2
votes
4
replies
721
views
whole tissue and RNA-seq: can I still study specific cell types?
WGCNA
rnaseq
2.5 years ago by
demoraesdiogo2017
▴ 100
0
votes
0
replies
948
views
Comment:
Comment: WGCNA module network interpretation
2.5 years ago by
demoraesdiogo2017
▴ 100
0
votes
1
reply
4.0k
views
Comment:
Comment: How to export a network of a specific module to Cytoscape - Consensus modules /
2.5 years ago by
demoraesdiogo2017
▴ 100
0
votes
1
reply
4.0k
views
Comment:
Comment: How to export a network of a specific module to Cytoscape - Consensus modules /
2.5 years ago by
demoraesdiogo2017
▴ 100
2
votes
2
replies
948
views
WGCNA module network interpretation
network
WGCNA
2.5 years ago by
demoraesdiogo2017
▴ 100
5
votes
9
replies
8.4k
views
6 follow
ANOVA for RNA-seq data?
anova
RNA-Seq
updated 2.2 years ago by
Carlo Yague
8.4k • written 4.0 years ago by
demoraesdiogo2017
▴ 100
14
votes
8
replies
8.9k
views
8 follow
correct way of analyzing cell proportions in singlecell data
single-cell RNaseq
updated 21 months ago by
Deepam
• 0 • written 3.3 years ago by
demoraesdiogo2017
▴ 100
1
vote
1
reply
685
views
gene expression x phenotype correlation
RNA-Seq
updated 2.7 years ago by
Gordon Smyth
★ 6.5k • written 2.8 years ago by
demoraesdiogo2017
▴ 100
0
votes
1
reply
641
views
Comment:
C: two samples with 0% alignment
2.8 years ago by
demoraesdiogo2017
▴ 100
1
vote
3
replies
641
views
two samples with 0% alignment
galaxy
hisat2
RNA-Seq
2.8 years ago by
demoraesdiogo2017
▴ 100
0
votes
1
reply
534
views
Comment:
C: anyway to save contaminated samples?
2.8 years ago by
demoraesdiogo2017
▴ 100
2
votes
5
replies
534
views
anyway to save contaminated samples?
RNA-Seq
2.8 years ago by
demoraesdiogo2017
▴ 100
2
votes
2
replies
631
views
blasting unaligned reads on usegalaxy
usegalaxy
RNA-Seq
hisat2
2.8 years ago by
demoraesdiogo2017
▴ 100
0
votes
0
replies
479
views
over represented adapter in reverse but not in forward reads?
RNA-Seq
2.8 years ago by
demoraesdiogo2017
▴ 100
0
votes
1
reply
446
views
clusters with no enrichment?
RNA-Seq
2.9 years ago by
demoraesdiogo2017
▴ 100
0
votes
1
reply
706
views
Seurat merge differing number of rows
seurat
updated 2.9 years ago by
Biostar
20 • written 2.9 years ago by
demoraesdiogo2017
▴ 100
0
votes
0
replies
18k
views
Comment:
C: How To Associate Cpg Coordinate With The Gene Names Or Entrez Id
3.1 years ago by
demoraesdiogo2017
▴ 100
0
votes
2
replies
20k
views
Comment:
A: Differences between FPKM and FPKM-UQ files in gene expression analysis
3.2 years ago by
demoraesdiogo2017
▴ 100
0
votes
0
replies
8.9k
views
Comment:
C: correct way of analyzing cell proportions in singlecell data
3.3 years ago by
demoraesdiogo2017
▴ 100
1
vote
6
replies
5.2k
views
subscript out of bounds in seurat expression matrix [SOLVED]
seurat
3.3 years ago by
demoraesdiogo2017
▴ 100
0
votes
0
replies
5.2k
views
Comment:
C: subscript out of bounds in seurat expression matrix
3.3 years ago by
demoraesdiogo2017
▴ 100
0
votes
1
reply
5.2k
views
Comment:
C: subscript out of bounds in seurat expression matrix
3.3 years ago by
demoraesdiogo2017
▴ 100
0
votes
1
reply
5.2k
views
Comment:
C: subscript out of bounds in seurat expression matrix
3.3 years ago by
demoraesdiogo2017
▴ 100
0
votes
0
replies
1.5k
views
Comment:
C: Merge enrichement analysis results
3.4 years ago by
demoraesdiogo2017
▴ 100
2
votes
1
reply
3.5k
views
Answer:
A: Heatmap from the RNAseq raw count data
3.4 years ago by
demoraesdiogo2017
▴ 100
0
votes
0
replies
503
views
comparing ScRNA-seq data from two different studies: should batch effects be corrected with pooled cells or not?
ScRNA-seq
3.4 years ago by
demoraesdiogo2017
▴ 100
0
votes
1
reply
1.5k
views
Answer:
A: Merge enrichement analysis results
3.4 years ago by
demoraesdiogo2017
▴ 100
77 results • Page
1 of 2
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6