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26
votes
14
replies
27k
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10 follow
Number Of Reads In A Sam File Which Are Assigned To Each Chromosome?
alignment sam
updated 6 months ago by 39k • written 11.6 years ago by ★ 4.1k
1
vote
0
replies
3.2k
views
Answer: A: Working With Phastcons Files
updated 2.3 years ago by 39k • written 10.1 years ago by ★ 4.1k
8
votes
4
replies
7.3k
views
How Do I Overlay Tracks In Genomic Viewers Such As Igv Or Igb?
visualization
updated 3.0 years ago by ★ 1.4k • written 10.4 years ago by ★ 4.1k
15
votes
8
replies
20k
views
7 follow
Is There A Program For Viewing Bed Files And Wig Files?
bed wiggle
updated 3.1 years ago by • 0 • written 11.8 years ago by ★ 4.1k
4
votes
2
replies
6.4k
views
Answer: A: Visualizing Coverage Of Ngs Reads Across Reference Genome
updated 3.5 years ago by 39k • written 9.9 years ago by ★ 4.1k
5
votes
1
reply
5.5k
views
Answer: A: Identify Summit Positions From Bed File
updated 3.5 years ago by 39k • written 9.9 years ago by ★ 4.1k
2
votes
0
replies
13k
views
Answer: A: Sam To Bed File With Counter Column
updated 3.5 years ago by 39k • written 10.4 years ago by ★ 4.1k
3
votes
0
replies
15k
views
Answer: A: How To Find Unique Reads?
updated 3.7 years ago by 39k • written 9.6 years ago by ★ 4.1k
2
votes
2
replies
2.1k
views
Correlation Between Tags On The Sense And Antisense Strand?
correlation wiggle
updated 4.7 years ago by 20 • written 11.1 years ago by ★ 4.1k
1
vote
2
replies
1.7k
views
Where Do I Get Runfiles For Specific Machines For Simngs?
updated 5.0 years ago by • 0 • written 11.2 years ago by ★ 4.1k
10
votes
1
reply
4.6k
views
Two Fastq Files And Alignment With Bwa.
bwa sam alignment fastq
updated 5.2 years ago by 20 • written 11.6 years ago by ★ 4.1k
3
votes
3
replies
2.0k
views
Keeping Tags That Are Mapped To The Same Place By Two Aligners
alignment bwa bowtie
updated 6.0 years ago by 20 • written 10.5 years ago by ★ 4.1k
2
votes
1
reply
1.7k
views
The Role Of Alignment In Processing Sequencing Data
alignment
updated 7.1 years ago by 20 • written 11.6 years ago by ★ 4.1k
4
votes
1
reply
2.2k
views
What Is 'Read Length' In The Context Of Simlibrary?
updated 7.7 years ago by 20 • written 10.6 years ago by ★ 4.1k
1
vote
1
reply
1.7k
views
Where Can I Find Wigencode?
wiggle
updated 7.9 years ago by 20 • written 11.6 years ago by ★ 4.1k
3
votes
6
replies
2.3k
views
A Question About Translating Transcript-Based Microarray Data Into Gene-Based Microarray Data
microarray
updated 8.4 years ago by 20 • written 10.2 years ago by ★ 4.1k
5
votes
1
reply
5.2k
views
Where Does The Correlation Within And Between Strands In A Dna-Seq Experiment Come From?
correlation
updated 8.8 years ago by 20 • written 10.6 years ago by ★ 4.1k
1
vote
4
replies
3.4k
views
How Do I Convert From Sam To Eland Format?
sam
updated 8.9 years ago by ▴ 50 • written 11.2 years ago by ★ 4.1k
3
votes
4
replies
3.0k
views
If A Read Is Clipped, What Is The Preferred Way To Make Tag Counts?
genome-coverage sam
updated 11 months ago by 39k • written 10.3 years ago by ★ 4.1k
13
votes
4
replies
4.4k
views
Is There A Tool For Converting A Fixed Step Wig To A Variable Step Wig?
wiggle
updated 9.4 years ago by • 0 • written 11.6 years ago by ★ 4.1k
27
votes
6
replies
7.0k
views
How Do You Decide When A Sequencing Run Is Too Bad To Have Reliable Information?
chip-seq
updated 9.4 years ago by 20 • written 10.1 years ago by ★ 4.1k
0
votes
1
reply
13k
views
Comment: C: Bwa On Mac : How To Run It On Terminal
9.5 years ago by KCC ★ 4.1k
0
votes
1
reply
13k
views
Answer: A: Bwa On Mac : How To Run It On Terminal
9.5 years ago by KCC ★ 4.1k
0
votes
0
replies
5.3k
views
Comment: C: Why Does This The Sam Record Having A Mapping Quality Of 0
9.6 years ago by KCC ★ 4.1k
1
vote
0
replies
4.9k
views
Answer: A: Merge 4 Fastq Files
9.6 years ago by KCC ★ 4.1k
1
vote
0
replies
3.6k
views
Comment: C: Manipulation Of Large Numbers Of Sequences Using Python Or Matlab
9.6 years ago by KCC ★ 4.1k
1
vote
1
reply
13k
views
Answer: A: Plotting Reads Around Tss
9.6 years ago by KCC ★ 4.1k
1
vote
1
reply
4.0k
views
Comment: C: Is It Okay To Remove Chrun And Chr*_Random Reads From A Bed File?
9.7 years ago by KCC ★ 4.1k
13
votes
5
replies
6.0k
views
A Call For Clear Information On How To Use F-Seq For Faire-Seq
updated 9.8 years ago by 20 • written 10.2 years ago by ★ 4.1k
1
vote
1
reply
2.4k
views
Answer: A: Isn'T A Prokaryotic Gene Continuous..?
9.8 years ago by KCC ★ 4.1k
1
vote
0
replies
2.4k
views
Comment: C: Is There A Realtime Molecular Clock Within The Genome To Co-Ordinate The Develop
9.8 years ago by KCC ★ 4.1k
3
votes
1
reply
8.9k
views
Answer: A: What Is The Best Way To Find Common Transcription Factor Binding Site From A Set
9.8 years ago by KCC ★ 4.1k
1
vote
0
replies
3.1k
views
Comment: C: Science Article On Social Influence Bias On Voting Patterns ("Herding") With Imp
9.8 years ago by KCC ★ 4.1k
1
vote
0
replies
5.7k
views
Answer: A: Fisher Exact Test For Testing Ratios Of Two Columns
9.8 years ago by KCC ★ 4.1k
1
vote
0
replies
4.5k
views
Comment: C: Beginning Bioinformatics Student In Need Of Advice And Clarification.
9.8 years ago by KCC ★ 4.1k
2
votes
1
reply
3.1k
views
Answer: A: Science Article On Social Influence Bias On Voting Patterns ("Herding") With Imp
9.8 years ago by KCC ★ 4.1k
0
votes
0
replies
1.9k
views
Answer: A: Ambiguity In Repeat Masked File In Ucsc
9.8 years ago by KCC ★ 4.1k
1
vote
0
replies
36k
views
Comment: C: Counting Number Of Bases In A Fastq File
9.9 years ago by KCC ★ 4.1k
0
votes
0
replies
8.1k
views
Comment: C: Generate Random Genomic Regions
9.9 years ago by KCC ★ 4.1k
1
vote
0
replies
3.3k
views
Answer: A: Tool Or Software To Determing Tag Redundancy (Summary Of Library Complexity)
9.9 years ago by KCC ★ 4.1k
0
votes
1
reply
4.7k
views
Comment: C: Macs2 And Peak Calling On Chromosome X
9.9 years ago by KCC ★ 4.1k
6
votes
1
reply
8.1k
views
Answer: A: Generate Random Genomic Regions
9.9 years ago by KCC ★ 4.1k
3
votes
0
replies
3.5k
views
Answer: A: Should You Remove Clonal Read (Picard Mark Duplicates) Before Chipseq Peak Calli
9.9 years ago by KCC ★ 4.1k
7
votes
2
replies
11k
views
Answer: A: Downstream Analysis
9.9 years ago by KCC ★ 4.1k
2
votes
0
replies
11k
views
Comment: C: Downstream Analysis
9.9 years ago by KCC ★ 4.1k
0
votes
0
replies
1.8k
views
Comment: C: How To Identify Spliceforms In A Gff File?
9.9 years ago by KCC ★ 4.1k
2
votes
1
reply
7.5k
views
Answer: A: How To Convert A Simulation Trajectory To A Animation
9.9 years ago by KCC ★ 4.1k
0
votes
0
replies
2.8k
views
Answer: A: Searching Fasta File For Specific Ids
9.9 years ago by KCC ★ 4.1k
1
vote
1
reply
4.1k
views
Answer: A: #Bioinformatics Crowdcoding
9.9 years ago by KCC ★ 4.1k
0
votes
1
reply
6.3k
views
Answer: A: Python - Scan Thorugh A Large File And Report Matches In Vcf File Under Conditio
9.9 years ago by KCC ★ 4.1k
241 results • Page 1 of 5
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