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851
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Which fasta files are assembled transcripts IDBA_tran assembler ?
RNA-Seq Assembly
updated 19 months ago by • 0 • written 5.4 years ago by ▴ 1000
3
votes
2
replies
1.5k
views
How to download Time Calibration Data for Phylogenetic tree estimation ?
gene DNA RNA
updated 2.2 years ago by ▴ 40 • written 4.5 years ago by ▴ 1000
0
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0
replies
599
views
How do I filter the annotated genome ?
protein genome gene
2.8 years ago by sunnykevin97 ▴ 1000
0
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0
replies
1.4k
views
Comment: Comment: Duplication genes in Mitochondrial genome ?
3.0 years ago by sunnykevin97 ▴ 1000
0
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0
replies
792
views
Comment: Comment: D-loop in mitogenomes?
3.0 years ago by sunnykevin97 ▴ 1000
0
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0
replies
1.2k
views
How to generate Kimura substitution level plots for TE (transposable elements) ?
gene genome protein
3.1 years ago by sunnykevin97 ▴ 1000
0
votes
1
reply
792
views
D-loop in mitogenomes?
gene genome protein
3.0 years ago by sunnykevin97 ▴ 1000
0
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0
replies
8.7k
views
Comment: Comment: Blast e-value 0E0
3.2 years ago by sunnykevin97 ▴ 1000
0
votes
1
reply
767
views
Tools for finding the duplications in genomes for phylogenomics study ?
gene genome protein
updated 3.2 years ago by • 0 • written 3.2 years ago by ▴ 1000
1
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1
reply
12k
views
Comment: Comment: Which hg38 file?
3.2 years ago by sunnykevin97 ▴ 1000
0
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1
reply
1.4k
views
Comment: Comment: Duplication genes in Mitochondrial genome ?
3.2 years ago by sunnykevin97 ▴ 1000
0
votes
2
replies
12k
views
Comment: Comment: Which hg38 file?
3.2 years ago by sunnykevin97 ▴ 1000
1
vote
3
replies
1.4k
views
Duplication genes in Mitochondrial genome ?
gene genome protein
3.0 years ago by sunnykevin97 ▴ 1000
8
votes
1
reply
1.1k
views
Visualization tools for viewing the genes orientation in the mitogenomes
gene genome protein
updated 3.3 years ago by ★ 1.8k • written 3.3 years ago by ▴ 1000
2
votes
0
replies
3.0k
views
Comment: Comment: Error: missing values and NaN's not allowed if 'na.rm' is FALSE
3.3 years ago by sunnykevin97 ▴ 1000
0
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1
reply
3.0k
views
Comment: Comment: Error: missing values and NaN's not allowed if 'na.rm' is FALSE
3.3 years ago by sunnykevin97 ▴ 1000
0
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0
replies
3.0k
views
Comment: Comment: Error: missing values and NaN's not allowed if 'na.rm' is FALSE
3.3 years ago by sunnykevin97 ▴ 1000
7
votes
4
replies
3.0k
views
Error: missing values and NaN's not allowed if 'na.rm' is FALSE
Genome Software
3.3 years ago by sunnykevin97 ▴ 1000
1
vote
1
reply
1.1k
views
Comment: Comment: parsing the output in to a table format ?
3.3 years ago by sunnykevin97 ▴ 1000
11
votes
3
replies
1.1k
views
parsing the output in to a table format ?
gene aw genome protein
updated 3.3 years ago by 5.1k • written 3.3 years ago by ▴ 1000
0
votes
1
reply
852
views
Tools for functional annotation of nucleotide and amino acid sequences ?
gene genome protein
updated 3.2 years ago by ▴ 30 • written 3.3 years ago by ▴ 1000
2
votes
0
replies
1.2k
views
Comment: Comment: Parsing the codeml output in nice format?
3.3 years ago by sunnykevin97 ▴ 1000
2
votes
2
replies
1.2k
views
Parsing the codeml output in nice format?
gene genome protein
3.3 years ago by sunnykevin97 ▴ 1000
0
votes
0
replies
701
views
Running Paml (CODEML) on batch mode ?
gene genome protein
3.3 years ago by sunnykevin97 ▴ 1000
2
votes
0
replies
786
views
Comment: Comment: How do I run pal2nal.pl in batch mode ?
3.3 years ago by sunnykevin97 ▴ 1000
2
votes
0
replies
19k
views
Comment: Comment: How To Do Alignment, Stop Codon Removal And Dn/Ds Calulation In One Go?
3.3 years ago by sunnykevin97 ▴ 1000
0
votes
0
replies
1.8k
views
Comment: Comment: Translation table for annotating fish genomes ?
3.3 years ago by sunnykevin97 ▴ 1000
0
votes
1
reply
1.8k
views
Comment: Comment: Translation table for annotating fish genomes ?
3.3 years ago by sunnykevin97 ▴ 1000
0
votes
1
reply
1.8k
views
Comment: Comment: Translation table for annotating fish genomes ?
3.3 years ago by sunnykevin97 ▴ 1000
0
votes
6
replies
1.8k
views
Translation table for annotating fish genomes ?
gene genome protein
3.3 years ago by sunnykevin97 ▴ 1000
0
votes
0
replies
640
views
How to choose the substitution models for each partition ?
gene genome protein
3.3 years ago by sunnykevin97 ▴ 1000
0
votes
0
replies
1.9k
views
Comment: Comment: How to extract fasta subsequences from a multiline fasta file which has very lon
3.4 years ago by sunnykevin97 ▴ 1000
2
votes
1
reply
1.9k
views
Comment: Comment: How to extract fasta subsequences from a multiline fasta file which has very lon
3.4 years ago by sunnykevin97 ▴ 1000
8
votes
7
replies
1.9k
views
How to extract fasta subsequences from a multiline fasta file which has very long headers ?
gene genome protein
3.4 years ago by sunnykevin97 ▴ 1000
0
votes
0
replies
1.9k
views
Comment: Comment: How to extract fasta subsequences from a multiline fasta file which has very lon
3.4 years ago by sunnykevin97 ▴ 1000
0
votes
1
reply
11k
views
Comment: Comment: How do I extract Fasta Sequences based on a list of IDs?
3.4 years ago by sunnykevin97 ▴ 1000
0
votes
0
replies
560
views
How to extract the CDS from a fasta file using the protein IDS ?
gene genome protein
3.4 years ago by sunnykevin97 ▴ 1000
4
votes
4
replies
1.3k
views
Why less Orthologs - can give enough information ?
gene genome protein
3.4 years ago by sunnykevin97 ▴ 1000
0
votes
0
replies
1.3k
views
Comment: Comment: Why less Orthologs - can give enough information ?
3.4 years ago by sunnykevin97 ▴ 1000
3
votes
2
replies
1.2k
views
Mauve - bacterial genome viewer?
Genome Software
3.4 years ago by sunnykevin97 ▴ 1000
0
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0
replies
1.2k
views
Answer: Answer: Mauve - bacterial genome viewer?
3.4 years ago by sunnykevin97 ▴ 1000
0
votes
0
replies
11k
views
Comment: Comment: Hard-masked or soft-masked genome
3.4 years ago by sunnykevin97 ▴ 1000
9
votes
2
replies
1.1k
views
Repeat Masking step is really important on Low coverage genomes (~9x-30X) ?
gene genome protein
updated 3.4 years ago by ▴ 210 • written 3.4 years ago by ▴ 1000
2
votes
0
replies
2.4k
views
Comment: Comment: Difference b/w primary and alternate genome assembly ?
3.4 years ago by sunnykevin97 ▴ 1000
9
votes
3
replies
1.1k
views
How do I extract a fasta sequence using the specific keyword (**Psychro**) ?
protein gene genome
written 3.4 years ago by ▴ 1000
0
votes
0
replies
11k
views
Comment: Comment: How do I extract Fasta Sequences based on a list of IDs?
3.4 years ago by sunnykevin97 ▴ 1000
2
votes
0
replies
1.1k
views
Comment: Comment: How do I extract a fasta sequence using the specific keyword (**Psychro**) ?
3.4 years ago by sunnykevin97 ▴ 1000
2
votes
2
replies
3.1k
views
Comment: Comment: ncbi-genome-download - bacterial and viral genomes ?
3.4 years ago by sunnykevin97 ▴ 1000
20
votes
5
replies
3.1k
views
ncbi-genome-download - bacterial and viral genomes ?
protein gene genome
updated 3.4 years ago by ▴ 210 • written 3.4 years ago by ▴ 1000
0
votes
0
replies
1.8k
views
Comment: Comment: Removing bacterial sequences from assembled eukaryotic draft genomes ?
3.4 years ago by sunnykevin97 ▴ 1000
266 results • Page 1 of 6
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