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Comment: Comment: Short reads to identify stuctural variants
5 months ago by priya.bmg ▴ 70
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0
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1.1k
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Comment: Comment: Short reads to identify stuctural variants
5 months ago by priya.bmg ▴ 70
1
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3
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889
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Visualise duplications and inversions
inversions duplications
updated 5 months ago by ★ 4.3k • written 5 months ago by ▴ 70
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1
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1.1k
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Comment: Comment: Short reads to identify stuctural variants
5 months ago by priya.bmg ▴ 70
1
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6
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1.1k
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Short reads to identify stuctural variants
SV long-read short-read
5 months ago by priya.bmg ▴ 70
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0
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3.3k
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Comment: Comment: pbmm2 alignment of long reads
15 months ago by priya.bmg ▴ 70
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1
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3.3k
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Comment: Comment: pbmm2 alignment of long reads
15 months ago by priya.bmg ▴ 70
4
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9
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3.3k
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pbmm2 alignment of long reads
Long-reads pbmm2 alignment
15 months ago by priya.bmg ▴ 70
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1
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3.3k
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Comment: Comment: pbmm2 alignment of long reads
15 months ago by priya.bmg ▴ 70
0
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0
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3.3k
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Comment: Comment: pbmm2 alignment of long reads
15 months ago by priya.bmg ▴ 70
0
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2
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712
views
Regions not clear in VCF
whole-exome variant-calling
updated 18 months ago by 45k • written 18 months ago by ▴ 70
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0
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1.4k
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Comment: Comment: Confirming called variants
23 months ago by priya.bmg ▴ 70
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1
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1.4k
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Comment: Comment: Confirming called variants
23 months ago by priya.bmg ▴ 70
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5
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1.4k
views
Confirming called variants
GATK gnomAD
updated 23 months ago by ★ 2.4k • written 23 months ago by ▴ 70
0
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0
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602
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Visualize tfrecords file from Deepvariant
gzipped flow tensor Deepvariant records
2.4 years ago by priya.bmg ▴ 70
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1
reply
29k
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Comment: Comment: intersect VCF files
2.6 years ago by priya.bmg ▴ 70
0
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1
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29k
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Comment: Comment: intersect VCF files
2.7 years ago by priya.bmg ▴ 70
0
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1
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29k
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Comment: Comment: intersect VCF files
2.7 years ago by priya.bmg ▴ 70
0
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0
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962
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Comment: Comment: Sequencing old DNA samples
2.9 years ago by priya.bmg ▴ 70
2
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2
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962
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Sequencing old DNA samples
Sequencing
2.9 years ago by priya.bmg ▴ 70
0
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1
reply
929
views
Pandas Data Frame
vcf GATK-SV pandas annotation
updated 2.9 years ago by ▴ 410 • written 2.9 years ago by ▴ 70
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1
reply
1.3k
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Comment: Comment: Coexpression analysis
3.0 years ago by priya.bmg ▴ 70
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1
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1.3k
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Comment: Comment: Coexpression analysis
3.0 years ago by priya.bmg ▴ 70
1
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5
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1.3k
views
Coexpression analysis
CEMitool R
updated 2.3 years ago by 45k • written 3.0 years ago by ▴ 70
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0
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3.9k
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Comment: Comment: WGCNA, module trait relationship
3.0 years ago by priya.bmg ▴ 70
0
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0
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1.2k
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Comment: Comment: Loading Traitdata file for WGCNA analysis
3.0 years ago by priya.bmg ▴ 70
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1
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1.2k
views
Comment: Comment: Loading Traitdata file for WGCNA analysis
3.0 years ago by priya.bmg ▴ 70
1
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4
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1.2k
views
Loading Traitdata file for WGCNA analysis
R WGCNA
updated 2.5 years ago by 45k • written 3.0 years ago by ▴ 70
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0
replies
524
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Gene prioritization
MAGMA gene-prioritization
updated 2.3 years ago by 45k • written 3.0 years ago by ▴ 70
2
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4
replies
3.8k
views
PacBio Raw Data File Formats
PacBio
updated 2.5 years ago by 45k • written 3.2 years ago by ▴ 70
0
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0
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3.0k
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Comment: Comment: Lockfile command not found
3.2 years ago by priya.bmg ▴ 70
0
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1
reply
1.4k
views
Pacbio workflow
structural pbsv variants
updated 3.2 years ago by ▴ 50 • written 3.8 years ago by ▴ 70
0
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2
replies
1.1k
views
Bacterial contamination in human DNA sample
Long-read-sequencing Bacterial-contamination
updated 18 months ago by 45k • written 3.3 years ago by ▴ 70
0
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0
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711
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Methylation calling -Primrose Package
Methylation CIGAR PacBio
3.3 years ago by priya.bmg ▴ 70
0
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0
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1.2k
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Comment: Comment: Hard filtering variants
3.6 years ago by priya.bmg ▴ 70
1
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2
replies
1.2k
views
Hard filtering variants
whole exome data
3.6 years ago by priya.bmg ▴ 70
0
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1
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3.0k
views
Comment: Comment: Lockfile command not found
3.7 years ago by priya.bmg ▴ 70
1
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1
reply
3.0k
views
Comment: Comment: Lockfile command not found
3.7 years ago by priya.bmg ▴ 70
3
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8
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3.0k
views
Lockfile command not found
Oslo Lockfile conda concurrency
3.2 years ago by priya.bmg ▴ 70
0
votes
0
replies
809
views
Snakemake workflow-PacBio
Snakemake PacBio
3.7 years ago by priya.bmg ▴ 70
0
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0
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54k
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Comment: Comment: Filtering Vcf File
3.8 years ago by priya.bmg ▴ 70
0
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1
reply
1.5k
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Filtering of rare variants
filtering Rare variants
updated 3.8 years ago by 166k • written 3.8 years ago by ▴ 70
1
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2
replies
1.6k
views
Shared variants
filtering variants GATK
updated 3.9 years ago by ▴ 480 • written 3.9 years ago by ▴ 70
0
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1
reply
871
views
Post filtering analysis for exome data
shared rare Hard-filtering variants
updated 3.9 years ago by 166k • written 3.9 years ago by ▴ 70
0
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0
replies
709
views
False negatives -Hard filtering
calling Variant GATK Exome Concordance
3.9 years ago by priya.bmg ▴ 70
0
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1
reply
869
views
Individual or joint variant call ing
exome Filtering analysis variants
updated 3.9 years ago by ▴ 840 • written 3.9 years ago by ▴ 70
0
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1
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827
views
Preprocessing exome sequence
Analysis workflow-Germline GATK Variant
updated 4.0 years ago by 89k • written 4.0 years ago by ▴ 70
0
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0
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942
views
Error in merged bam files
picard GATK NGS
4.1 years ago by priya.bmg ▴ 70
0
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1
reply
992
views
Mark duplicates the bam files sorted by coordinates
Spark duplicates Mark
updated 4.1 years ago by 4.2k • written 4.1 years ago by ▴ 70
0
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0
replies
3.4k
views
Comment: Comment: Exec format error in unmapped bam file
4.1 years ago by priya.bmg ▴ 70
105 results • Page 1 of 3
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