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Comment: Comment: Short reads to identify stuctural variants
4 weeks ago by priya.bmg ▴ 70
0
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0
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594
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Comment: Comment: Short reads to identify stuctural variants
4 weeks ago by priya.bmg ▴ 70
1
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3
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546
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Visualise duplications and inversions
inversions duplications
updated 4 weeks ago by ★ 4.2k • written 4 weeks ago by ▴ 70
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1
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594
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Comment: Comment: Short reads to identify stuctural variants
4 weeks ago by priya.bmg ▴ 70
1
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6
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594
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Short reads to identify stuctural variants
SV long-read short-read
4 weeks ago by priya.bmg ▴ 70
0
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0
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2.2k
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Comment: Comment: pbmm2 alignment of long reads
10 months ago by priya.bmg ▴ 70
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1
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2.2k
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Comment: Comment: pbmm2 alignment of long reads
11 months ago by priya.bmg ▴ 70
4
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9
replies
2.2k
views
pbmm2 alignment of long reads
Long-reads pbmm2 alignment
10 months ago by priya.bmg ▴ 70
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1
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2.2k
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Comment: Comment: pbmm2 alignment of long reads
11 months ago by priya.bmg ▴ 70
0
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0
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2.2k
views
Comment: Comment: pbmm2 alignment of long reads
11 months ago by priya.bmg ▴ 70
0
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2
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557
views
Regions not clear in VCF
whole-exome variant-calling
updated 13 months ago by 45k • written 13 months ago by ▴ 70
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0
replies
1.2k
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Comment: Comment: Confirming called variants
19 months ago by priya.bmg ▴ 70
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1
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1.2k
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Comment: Comment: Confirming called variants
19 months ago by priya.bmg ▴ 70
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5
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1.2k
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Confirming called variants
GATK gnomAD
updated 19 months ago by ★ 2.4k • written 19 months ago by ▴ 70
0
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0
replies
506
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Visualize tfrecords file from Deepvariant
gzipped flow tensor Deepvariant records
2.0 years ago by priya.bmg ▴ 70
0
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1
reply
28k
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Comment: Comment: intersect VCF files
2.3 years ago by priya.bmg ▴ 70
0
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1
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28k
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Comment: Comment: intersect VCF files
2.3 years ago by priya.bmg ▴ 70
0
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1
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28k
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Comment: Comment: intersect VCF files
2.3 years ago by priya.bmg ▴ 70
0
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0
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848
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Comment: Comment: Sequencing old DNA samples
2.6 years ago by priya.bmg ▴ 70
2
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2
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848
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Sequencing old DNA samples
Sequencing
2.6 years ago by priya.bmg ▴ 70
0
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1
reply
787
views
Pandas Data Frame
vcf GATK-SV pandas annotation
updated 2.6 years ago by ▴ 410 • written 2.6 years ago by ▴ 70
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1
reply
1.1k
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Comment: Comment: Coexpression analysis
2.6 years ago by priya.bmg ▴ 70
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1
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1.1k
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Comment: Comment: Coexpression analysis
2.6 years ago by priya.bmg ▴ 70
1
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5
replies
1.1k
views
Coexpression analysis
CEMitool R
updated 23 months ago by 45k • written 2.6 years ago by ▴ 70
0
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0
replies
3.6k
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Comment: Comment: WGCNA, module trait relationship
2.6 years ago by priya.bmg ▴ 70
0
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0
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1.1k
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Comment: Comment: Loading Traitdata file for WGCNA analysis
2.6 years ago by priya.bmg ▴ 70
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1
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1.1k
views
Comment: Comment: Loading Traitdata file for WGCNA analysis
2.6 years ago by priya.bmg ▴ 70
1
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4
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1.1k
views
Loading Traitdata file for WGCNA analysis
R WGCNA
updated 2.2 years ago by 45k • written 2.6 years ago by ▴ 70
0
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0
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477
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Gene prioritization
MAGMA gene-prioritization
updated 23 months ago by 45k • written 2.7 years ago by ▴ 70
2
votes
4
replies
3.2k
views
PacBio Raw Data File Formats
PacBio
updated 2.2 years ago by 45k • written 2.8 years ago by ▴ 70
0
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0
replies
2.6k
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Comment: Comment: Lockfile command not found
2.8 years ago by priya.bmg ▴ 70
0
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1
reply
1.2k
views
Pacbio workflow
structural pbsv variants
updated 2.8 years ago by ▴ 50 • written 3.4 years ago by ▴ 70
0
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2
replies
888
views
Bacterial contamination in human DNA sample
Long-read-sequencing Bacterial-contamination
updated 13 months ago by 45k • written 2.9 years ago by ▴ 70
0
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0
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606
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Methylation calling -Primrose Package
Methylation CIGAR PacBio
2.9 years ago by priya.bmg ▴ 70
0
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0
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1.0k
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Comment: Comment: Hard filtering variants
3.2 years ago by priya.bmg ▴ 70
1
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2
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1.0k
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Hard filtering variants
whole exome data
3.2 years ago by priya.bmg ▴ 70
0
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1
reply
2.6k
views
Comment: Comment: Lockfile command not found
3.3 years ago by priya.bmg ▴ 70
1
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1
reply
2.6k
views
Comment: Comment: Lockfile command not found
3.3 years ago by priya.bmg ▴ 70
3
votes
8
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2.6k
views
Lockfile command not found
Oslo Lockfile conda concurrency
2.8 years ago by priya.bmg ▴ 70
0
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0
replies
722
views
Snakemake workflow-PacBio
Snakemake PacBio
3.3 years ago by priya.bmg ▴ 70
0
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0
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53k
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Comment: Comment: Filtering Vcf File
3.4 years ago by priya.bmg ▴ 70
0
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1
reply
1.3k
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Filtering of rare variants
filtering Rare variants
updated 3.4 years ago by 166k • written 3.5 years ago by ▴ 70
1
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2
replies
1.4k
views
Shared variants
filtering variants GATK
updated 3.5 years ago by ▴ 480 • written 3.5 years ago by ▴ 70
0
votes
1
reply
775
views
Post filtering analysis for exome data
shared rare Hard-filtering variants
updated 3.5 years ago by 166k • written 3.5 years ago by ▴ 70
0
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0
replies
613
views
False negatives -Hard filtering
calling Variant GATK Exome Concordance
3.5 years ago by priya.bmg ▴ 70
0
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1
reply
758
views
Individual or joint variant call ing
exome Filtering analysis variants
updated 3.5 years ago by ▴ 840 • written 3.5 years ago by ▴ 70
0
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1
reply
715
views
Preprocessing exome sequence
Analysis workflow-Germline GATK Variant
updated 3.7 years ago by 88k • written 3.7 years ago by ▴ 70
0
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0
replies
862
views
Error in merged bam files
picard GATK NGS
3.7 years ago by priya.bmg ▴ 70
0
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1
reply
868
views
Mark duplicates the bam files sorted by coordinates
Spark duplicates Mark
updated 3.7 years ago by 4.1k • written 3.7 years ago by ▴ 70
0
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0
replies
2.9k
views
Comment: Comment: Exec format error in unmapped bam file
3.7 years ago by priya.bmg ▴ 70
105 results • Page 1 of 3
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