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0
votes
2
replies
282
views
Regions not clear in VCF
whole-exome
variant-calling
updated 26 days ago by
Ram
43k • written 28 days ago by
priya.bmg
▴ 60
0
votes
0
replies
684
views
Comment:
Comment: Confirming called variants
6 months ago by
priya.bmg
▴ 60
0
votes
1
reply
684
views
Comment:
Comment: Confirming called variants
6 months ago by
priya.bmg
▴ 60
0
votes
5
replies
684
views
Confirming called variants
GATK
gnomAD
updated 6 months ago by
barslmn
★ 2.1k • written 6 months ago by
priya.bmg
▴ 60
0
votes
0
replies
322
views
Visualize tfrecords file from Deepvariant
gzipped
flow
tensor
Deepvariant
records
12 months ago by
priya.bmg
▴ 60
0
votes
1
reply
24k
views
Comment:
Comment: intersect VCF files
15 months ago by
priya.bmg
▴ 60
0
votes
1
reply
24k
views
Comment:
Comment: intersect VCF files
15 months ago by
priya.bmg
▴ 60
0
votes
1
reply
24k
views
Comment:
Comment: intersect VCF files
15 months ago by
priya.bmg
▴ 60
0
votes
0
replies
626
views
Comment:
Comment: Sequencing old DNA samples
18 months ago by
priya.bmg
▴ 60
1
vote
2
replies
626
views
Sequencing old DNA samples
Sequencing
18 months ago by
priya.bmg
▴ 60
0
votes
1
reply
522
views
Pandas Data Frame
vcf
GATK-SV
pandas
annotation
updated 18 months ago by
husensofteng
▴ 410 • written 18 months ago by
priya.bmg
▴ 60
0
votes
1
reply
764
views
Comment:
Comment: Coexpression analysis
19 months ago by
priya.bmg
▴ 60
0
votes
1
reply
764
views
Comment:
Comment: Coexpression analysis
19 months ago by
priya.bmg
▴ 60
1
vote
5
replies
764
views
Coexpression analysis
CEMitool
R
updated 10 months ago by
Ram
43k • written 19 months ago by
priya.bmg
▴ 60
0
votes
0
replies
2.8k
views
Comment:
Comment: WGCNA, module trait relationship
19 months ago by
priya.bmg
▴ 60
0
votes
0
replies
753
views
Comment:
Comment: Loading Traitdata file for WGCNA analysis
19 months ago by
priya.bmg
▴ 60
0
votes
1
reply
753
views
Comment:
Comment: Loading Traitdata file for WGCNA analysis
19 months ago by
priya.bmg
▴ 60
1
vote
4
replies
753
views
Loading Traitdata file for WGCNA analysis
R
WGCNA
updated 13 months ago by
Ram
43k • written 19 months ago by
priya.bmg
▴ 60
0
votes
0
replies
365
views
Gene prioritization
MAGMA
gene-prioritization
updated 10 months ago by
Ram
43k • written 19 months ago by
priya.bmg
▴ 60
2
votes
4
replies
1.9k
views
PacBio Raw Data File Formats
PacBio
updated 13 months ago by
Ram
43k • written 21 months ago by
priya.bmg
▴ 60
0
votes
0
replies
1.9k
views
Comment:
Comment: Lockfile command not found
21 months ago by
priya.bmg
▴ 60
0
votes
1
reply
948
views
Pacbio workflow
structural
pbsv
variants
updated 21 months ago by
Maxine
▴ 40 • written 2.4 years ago by
priya.bmg
▴ 60
0
votes
2
replies
584
views
Bacterial contamination in human DNA sample
Long-read-sequencing
Bacterial-contamination
updated 29 days ago by
Ram
43k • written 22 months ago by
priya.bmg
▴ 60
0
votes
0
replies
397
views
Methylation calling -Primrose Package
Methylation
CIGAR
PacBio
22 months ago by
priya.bmg
▴ 60
0
votes
0
replies
721
views
Comment:
Comment: Hard filtering variants
2.2 years ago by
priya.bmg
▴ 60
1
vote
2
replies
721
views
Hard filtering variants
whole
exome
data
2.2 years ago by
priya.bmg
▴ 60
0
votes
1
reply
1.9k
views
Comment:
Comment: Lockfile command not found
2.3 years ago by
priya.bmg
▴ 60
1
vote
1
reply
1.9k
views
Comment:
Comment: Lockfile command not found
2.3 years ago by
priya.bmg
▴ 60
3
votes
8
replies
1.9k
views
Lockfile command not found
Oslo
Lockfile
conda
concurrency
21 months ago by
priya.bmg
▴ 60
0
votes
0
replies
577
views
Snakemake workflow-PacBio
Snakemake
PacBio
2.3 years ago by
priya.bmg
▴ 60
0
votes
0
replies
50k
views
Comment:
Comment: Filtering Vcf File
2.4 years ago by
priya.bmg
▴ 60
0
votes
1
reply
1.0k
views
Filtering of rare variants
filtering
Rare
variants
updated 2.4 years ago by
Pierre Lindenbaum
161k • written 2.4 years ago by
priya.bmg
▴ 60
1
vote
2
replies
1.1k
views
Shared variants
filtering
variants
GATK
updated 2.5 years ago by
sbstevenlee
▴ 480 • written 2.5 years ago by
priya.bmg
▴ 60
0
votes
1
reply
633
views
Post filtering analysis for exome data
shared
rare
Hard-filtering
variants
updated 2.5 years ago by
Pierre Lindenbaum
161k • written 2.5 years ago by
priya.bmg
▴ 60
0
votes
0
replies
464
views
False negatives -Hard filtering
calling
Variant
GATK
Exome
Concordance
2.5 years ago by
priya.bmg
▴ 60
0
votes
1
reply
570
views
Individual or joint variant call ing
exome
Filtering
analysis
variants
updated 2.5 years ago by
brunobsouzaa
▴ 830 • written 2.5 years ago by
priya.bmg
▴ 60
0
votes
1
reply
567
views
Preprocessing exome sequence
Analysis
workflow-Germline
GATK
Variant
updated 2.6 years ago by
ATpoint
82k • written 2.6 years ago by
priya.bmg
▴ 60
0
votes
0
replies
640
views
Error in merged bam files
picard
GATK
NGS
2.6 years ago by
priya.bmg
▴ 60
0
votes
1
reply
645
views
Mark duplicates the bam files sorted by coordinates
Spark
duplicates
Mark
updated 2.6 years ago by
benformatics
3.9k • written 2.6 years ago by
priya.bmg
▴ 60
0
votes
0
replies
2.1k
views
Comment:
Comment: Exec format error in unmapped bam file
2.6 years ago by
priya.bmg
▴ 60
0
votes
0
replies
2.1k
views
Comment:
Comment: Exec format error in unmapped bam file
2.6 years ago by
priya.bmg
▴ 60
0
votes
0
replies
2.1k
views
Comment:
Comment: Exec format error in unmapped bam file
2.6 years ago by
priya.bmg
▴ 60
0
votes
0
replies
2.1k
views
Comment:
Comment: Exec format error in unmapped bam file
2.6 years ago by
priya.bmg
▴ 60
0
votes
1
reply
2.1k
views
Comment:
Comment: Exec format error in unmapped bam file
2.6 years ago by
priya.bmg
▴ 60
0
votes
9
replies
2.1k
views
Exec format error in unmapped bam file
bam
samtools
updated 13 months ago by
Ram
43k • written 2.6 years ago by
priya.bmg
▴ 60
0
votes
0
replies
2.1k
views
Comment:
Comment: Exec format error in unmapped bam file
2.6 years ago by
priya.bmg
▴ 60
0
votes
0
replies
2.2k
views
Comment:
Comment: Snakemake bwa mem
2.7 years ago by
priya.bmg
▴ 60
0
votes
1
reply
2.2k
views
Comment:
Comment: Snakemake bwa mem
2.7 years ago by
priya.bmg
▴ 60
3
votes
7
replies
2.2k
views
Snakemake bwa mem
Snakemake
bwa
updated 16 months ago by
Ram
43k • written 2.7 years ago by
priya.bmg
▴ 60
0
votes
1
reply
2.6k
views
Comment:
Comment: Snakemake-Aligment using BWA-MEM2
2.7 years ago by
priya.bmg
▴ 60
95 results • Page
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