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0
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1
reply
2.3k
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Comment:
C: How to split numbers and strings?
updated 4.4 years ago by
Ram
44k • written 8.3 years ago by
mbk0asis
▴ 700
0
votes
0
replies
3.7k
views
Comment:
C: fGSEA result to csv
4.5 years ago by
mbk0asis
▴ 700
11
votes
3
replies
3.7k
views
fGSEA result to csv
fGSEA
RNA-Seq
GSEA
updated 4.5 years ago by
alserg
▴ 930 • written 4.5 years ago by
mbk0asis
▴ 700
0
votes
0
replies
11k
views
Comment:
C: WGCNA package in R: dendogram plot error
4.5 years ago by
mbk0asis
▴ 700
0
votes
0
replies
6.8k
views
Comment:
C: Joining vs merging paired ended reads
4.6 years ago by
mbk0asis
▴ 700
1
vote
1
reply
4.9k
views
Comment:
C: deepTools cluster information?
4.6 years ago by
mbk0asis
▴ 700
1
vote
0
replies
2.2k
views
Comment:
C: gdc-client download: ERROR: Max retries exceeded
4.8 years ago by
mbk0asis
▴ 700
1
vote
2
replies
1.8k
views
View gene list in GAGE enriched terms
gage
gsea
gene ontology
updated 5.0 years ago by
giderk
• 0 • written 6.1 years ago by
mbk0asis
▴ 700
1
vote
3
replies
2.2k
views
How can I access the consensus sequences of all human ERVs from Dfam?
dfam
erv
updated 5.2 years ago by
mlbendall
▴ 240 • written 6.2 years ago by
mbk0asis
▴ 700
0
votes
1
reply
9.7k
views
Comment:
C: How to speed up trimming using trim galorer
5.3 years ago by
mbk0asis
▴ 700
3
votes
1
reply
9.7k
views
Answer:
A: How to speed up trimming using trim galorer
5.4 years ago by
mbk0asis
▴ 700
0
votes
0
replies
1.1k
views
Comment:
C: 1000 genome project - difference between "0" and "0|0"
5.8 years ago by
mbk0asis
▴ 700
0
votes
1
reply
1.1k
views
Comment:
C: 1000 genome project - difference between "0" and "0|0"
5.8 years ago by
mbk0asis
▴ 700
2
votes
4
replies
1.1k
views
1000 genome project - difference between "0" and "0|0"
1000 genome project
genotype
vcf
updated 5.8 years ago by
Santosh Anand
5.7k • written 5.8 years ago by
mbk0asis
▴ 700
0
votes
1
reply
28k
views
Comment:
C: Produce PCA bi-plot for 1000 Genomes Phase III in VCF format
5.8 years ago by
mbk0asis
▴ 700
0
votes
1
reply
28k
views
Comment:
C: Produce PCA bi-plot for 1000 Genomes Phase III in VCF format
5.8 years ago by
mbk0asis
▴ 700
0
votes
0
replies
1.2k
views
Meaning of mfold upper limit?
mfold
macs2
ChIP-Seq
5.8 years ago by
mbk0asis
▴ 700
1
vote
1
reply
3.5k
views
Answer:
C: How can I download the fasta file of RepeatMasker UCSC table directly?
5.8 years ago by
mbk0asis
▴ 700
2
votes
0
replies
1.3k
views
Comment:
C: Is there any method to run tophat ?
5.8 years ago by
mbk0asis
▴ 700
1
vote
1
reply
1.9k
views
how to interpret imputed/phased VCF?
vcf
imputed
phased
5.8 years ago by
mbk0asis
▴ 700
0
votes
0
replies
4.4k
views
Comment:
C: P-value calculation for Gene Ontology Terms
5.9 years ago by
mbk0asis
▴ 700
3
votes
2
replies
2.8k
views
deepTools - change line colors in profile plots above a heatmap
deeptools
profile plot
heatmap
updated 5.9 years ago by
Devon Ryan
104k • written 5.9 years ago by
mbk0asis
▴ 700
0
votes
0
replies
3.2k
views
Comment:
C: How to get plasmid or costruct sequence from fastq file in c.elegans Whole-genom
5.9 years ago by
mbk0asis
▴ 700
0
votes
1
reply
1.1k
views
Can I combine sessions saved in UCSC genome browser?
UCSC genome browser
sessions
5.9 years ago by
mbk0asis
▴ 700
1
vote
1
reply
3.2k
views
Comment:
C: How to get plasmid or costruct sequence from fastq file in c.elegans Whole-genom
5.9 years ago by
mbk0asis
▴ 700
1
vote
0
replies
3.2k
views
Comment:
C: How to get plasmid or costruct sequence from fastq file in c.elegans Whole-genom
5.9 years ago by
mbk0asis
▴ 700
0
votes
0
replies
3.9k
views
Comment:
C: Blast many read sequences
6.0 years ago by
mbk0asis
▴ 700
1
vote
0
replies
1.5k
views
Comment:
C: Which repository is more appropriate to submit for cancer cell line (bulk) RNA-s
6.0 years ago by
mbk0asis
▴ 700
0
votes
0
replies
3.1k
views
Comment:
C: Deseq2 Differentially Expressed Genes between conditions
6.1 years ago by
mbk0asis
▴ 700
0
votes
0
replies
8.3k
views
Comment:
C: how to use GSEA analysis of RNA-seq expression profile data?
6.1 years ago by
mbk0asis
▴ 700
1
vote
0
replies
3.1k
views
Answer:
A: Deseq2 Differentially Expressed Genes between conditions
6.1 years ago by
mbk0asis
▴ 700
3
votes
1
reply
3.4k
views
Comment:
C: How to merge quality trimmed interlaced reads?
6.2 years ago by
mbk0asis
▴ 700
0
votes
1
reply
2.9k
views
Answer:
A: Data Discrepency from TCGA-GDC portal and GDC firehose
6.2 years ago by
mbk0asis
▴ 700
0
votes
1
reply
1.8k
views
Comment:
C: Repeat names with "dup" at the end in repeatMasker GTF (UCSC) file?
6.2 years ago by
mbk0asis
▴ 700
0
votes
3
replies
1.8k
views
Repeat names with "dup" at the end in repeatMasker GTF (UCSC) file?
repeatMasker
UCSC
updated 6.2 years ago by
genecats.ucsc
▴ 580 • written 6.2 years ago by
mbk0asis
▴ 700
0
votes
0
replies
732
views
CpG distribution in reads with variable length
pattern count
variable length
6.3 years ago by
mbk0asis
▴ 700
0
votes
0
replies
1.1k
views
Repetitive region expression in TCGA RNA-seq data?
TCGA
repetitive regions
6.4 years ago by
mbk0asis
▴ 700
3
votes
1
reply
3.2k
views
Answer:
A: Subsetting DESeq2 results by padj quantity
6.4 years ago by
mbk0asis
▴ 700
0
votes
0
replies
1.4k
views
Can we estimate actual copy number using Segment_means in TCGA level 3 CNV data?
TCGA
CNV
copy number
6.4 years ago by
mbk0asis
▴ 700
2
votes
3
replies
3.8k
views
How to calculate polygenic hazard score (PHS)?
plygenic hazard score
Alzheimer
statistics
updated 6.4 years ago by
jorma.o.jormakka
• 0 • written 7.1 years ago by
mbk0asis
▴ 700
0
votes
0
replies
5.3k
views
Comment:
C: plotProfile (deepTools) generated a peak on gene body region
6.5 years ago by
mbk0asis
▴ 700
0
votes
1
reply
5.3k
views
Comment:
C: plotProfile (deepTools) generated a peak on gene body region
6.5 years ago by
mbk0asis
▴ 700
0
votes
0
replies
5.3k
views
Comment:
C: plotProfile (deepTools) generated a peak on gene body region
6.5 years ago by
mbk0asis
▴ 700
2
votes
0
replies
4.7k
views
Comment:
C: samtools rmdup error
6.5 years ago by
mbk0asis
▴ 700
0
votes
1
reply
1.0k
views
Extraction of every n-th and m-th columns
bash
command
updated 6.6 years ago by
Alex Reynolds
35k • written 6.6 years ago by
mbk0asis
▴ 700
22
votes
16
replies
16k
views
9 follow
fasta - reverse complement sequence
fasta
reverse complement
bash
updated 6.6 years ago by
dugong
• 0 • written 8.1 years ago by
mbk0asis
▴ 700
0
votes
2
replies
11k
views
Answer:
A: TPM to logFC and pvalues
6.8 years ago by
mbk0asis
▴ 700
0
votes
0
replies
2.1k
views
Answer:
A: retrieve Sequence by Gene name?
6.9 years ago by
mbk0asis
▴ 700
7
votes
2
replies
2.2k
views
save plots in for loop
R
for loop
jpeg
grep
7.0 years ago by
mbk0asis
▴ 700
0
votes
3
replies
3.7k
views
coxph error : missing value where TRUE/FALSE needed
survival analysis
coxph
updated 7.0 years ago by
Santosh Anand
5.7k • written 7.0 years ago by
mbk0asis
▴ 700
171 results • Page
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