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0
votes
5
replies
747
views
How to index genome file for MethylDackel?
MethylDackel indexing Genome methylation
updated 8 months ago by 82k • written 8 months ago by ▴ 40
0
votes
0
replies
424
views
tools for miRNA target prediction in plants
Target miRNA
updated 10 months ago by 43k • written 2.5 years ago by ▴ 40
0
votes
0
replies
508
views
Annotation of differentially methylated region or based in methylkit using genomation, how to find annotation file?
methylkit epeigenetics R methylation differential analysis DNA
2.5 years ago by harshraje19 ▴ 40
1
vote
6
replies
2.0k
views
Methylkit (differential methylation analysis) error in data frame
methylation differential analysis R methylkit
2.7 years ago by harshraje19 ▴ 40
0
votes
0
replies
577
views
Error in methyl kit (differential methylation analysis) in R
epeigenetics methylation differential analysis R methylkit DNA
2.7 years ago by harshraje19 ▴ 40
4
votes
4
replies
943
views
How to perform alternative splicing from RNA Seq data?
RNA-Seq alternative-splicing
updated 2.8 years ago by 43k • written 2.9 years ago by ▴ 40
1
vote
1
reply
1.2k
views
Error in WGCNA?
R rna-seq RNA-Seq
updated 3.8 years ago by 87k • written 3.8 years ago by ▴ 40
3
votes
12
replies
1.5k
views
Can anyone suggest me the pipeline for de novo prediction of miRNAs?
RNA-Seq rna-seq next-gen sequence Assembly
updated 3.9 years ago by • 0 • written 4.3 years ago by ▴ 40
0
votes
0
replies
672
views
Is it possible to use, TASSEL for paired end data?
SNP sequencing snp
4.0 years ago by harshraje19 ▴ 40
0
votes
0
replies
1.1k
views
Error in exporting Network to VisANT format
ViSANT WGCNA NetworktoVisANT Coexpression
4.0 years ago by harshraje19 ▴ 40
7
votes
6
replies
898
views
How to convert ENSEMBL gene IDs to nucleotide sequences?
gene sequence sequencing rna-seq Assembly
updated 4.1 years ago by 142k • written 4.1 years ago by ▴ 40
2
votes
11
replies
9.6k
views
Error in WGCNA packages installation in R?
R software error snp
4.1 years ago by harshraje19 ▴ 40
0
votes
6
replies
1.1k
views
Error in demultiplexing of GBS data using GBSX_v1.3.jar
software error SNP gene next-gen genome
4.2 years ago by harshraje19 ▴ 40
2
votes
9
replies
2.7k
views
Differential gene expression analysis problem in EDGE R?
gene R rna-seq RNA-Seq software error
4.2 years ago by harshraje19 ▴ 40
0
votes
2
replies
559
views
How to perform the correlation analysis between gene counts (generated from RNA-Seq) and plant physiological data?
RNA-Seq rna-seq R gene
4.2 years ago by harshraje19 ▴ 40
3
votes
6
replies
802
views
Can anyone suggest me the tool to convert the gene ids to gene names?
gene sequence alignment
updated 4.2 years ago by 87k • written 4.2 years ago by ▴ 40
4
votes
16
replies
3.0k
views
How to concatenate four fastq files of NextSeq in linux?
RNA-Seq software error alignment assembly genome
4.3 years ago by harshraje19 ▴ 40
0
votes
3
replies
1.3k
views
miRDeep2- mapper problem with perl install.pl installation?
next-gen software error alignment RNA-Seq
4.3 years ago by harshraje19 ▴ 40
0
votes
3
replies
1.3k
views
Error in Cuffdiff
rna-seq sequencing RNA-Seq software error next-gen
4.3 years ago by harshraje19 ▴ 40
4
votes
5
replies
1.6k
views
Can anyone suggest me the recent and best pipeline for RNA-Seq data analysis
RNA-Seq
updated 4.4 years ago by ★ 6.0k • written 4.4 years ago by ▴ 40
1
vote
6
replies
975
views
Error in cuff merge? Problem in assemblies to create a single merged transcriptome annotation?
assembly rna-seq alignment
updated 4.4 years ago by 87k • written 4.4 years ago by ▴ 40
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