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0
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5
replies
1.5k
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How to index genome file for MethylDackel?
MethylDackel indexing Genome methylation
updated 2.2 years ago by 90k • written 2.2 years ago by ▴ 50
0
votes
0
replies
668
views
tools for miRNA target prediction in plants
Target miRNA
updated 2.4 years ago by 45k • written 4.0 years ago by ▴ 50
0
votes
0
replies
761
views
Annotation of differentially methylated region or based in methylkit using genomation, how to find annotation file?
methylkit epeigenetics R methylation differential analysis DNA
4.1 years ago by harshraje19 ▴ 50
1
vote
6
replies
3.0k
views
Methylkit (differential methylation analysis) error in data frame
methylation differential analysis R methylkit
4.2 years ago by harshraje19 ▴ 50
0
votes
0
replies
821
views
Error in methyl kit (differential methylation analysis) in R
epeigenetics methylation differential analysis R methylkit DNA
4.2 years ago by harshraje19 ▴ 50
4
votes
4
replies
1.7k
views
How to perform alternative splicing from RNA Seq data?
RNA-Seq alternative-splicing
updated 4.3 years ago by 45k • written 4.4 years ago by ▴ 50
1
vote
1
reply
1.6k
views
Error in WGCNA?
R rna-seq RNA-Seq
updated 5.3 years ago by 89k • written 5.3 years ago by ▴ 50
3
votes
12
replies
2.4k
views
Can anyone suggest me the pipeline for de novo prediction of miRNAs?
RNA-Seq rna-seq next-gen sequence Assembly
updated 5.4 years ago by • 0 • written 5.8 years ago by ▴ 50
0
votes
0
replies
867
views
Is it possible to use, TASSEL for paired end data?
SNP sequencing snp
5.5 years ago by harshraje19 ▴ 50
0
votes
0
replies
1.3k
views
Error in exporting Network to VisANT format
ViSANT WGCNA NetworktoVisANT Coexpression
5.5 years ago by harshraje19 ▴ 50
7
votes
6
replies
1.6k
views
How to convert ENSEMBL gene IDs to nucleotide sequences?
gene sequence sequencing rna-seq Assembly
updated 5.6 years ago by 154k • written 5.6 years ago by ▴ 50
3
votes
11
replies
12k
views
Error in WGCNA packages installation in R?
R software error snp
5.6 years ago by harshraje19 ▴ 50
0
votes
6
replies
1.7k
views
Error in demultiplexing of GBS data using GBSX_v1.3.jar
software error SNP gene next-gen genome
5.7 years ago by harshraje19 ▴ 50
2
votes
9
replies
3.9k
views
Differential gene expression analysis problem in EDGE R?
gene R rna-seq RNA-Seq software error
5.7 years ago by harshraje19 ▴ 50
0
votes
2
replies
892
views
How to perform the correlation analysis between gene counts (generated from RNA-Seq) and plant physiological data?
RNA-Seq rna-seq R gene
5.7 years ago by harshraje19 ▴ 50
3
votes
6
replies
1.3k
views
Can anyone suggest me the tool to convert the gene ids to gene names?
gene sequence alignment
updated 5.7 years ago by 89k • written 5.8 years ago by ▴ 50
4
votes
16
replies
4.3k
views
How to concatenate four fastq files of NextSeq in linux?
RNA-Seq software error alignment assembly genome
5.8 years ago by harshraje19 ▴ 50
0
votes
3
replies
1.8k
views
miRDeep2- mapper problem with perl install.pl installation?
next-gen software error alignment RNA-Seq
5.8 years ago by harshraje19 ▴ 50
0
votes
3
replies
1.6k
views
Error in Cuffdiff
rna-seq sequencing RNA-Seq software error next-gen
5.9 years ago by harshraje19 ▴ 50
4
votes
5
replies
2.2k
views
Can anyone suggest me the recent and best pipeline for RNA-Seq data analysis
RNA-Seq
updated 5.9 years ago by ★ 7.8k • written 5.9 years ago by ▴ 50
1
vote
6
replies
1.5k
views
Error in cuff merge? Problem in assemblies to create a single merged transcriptome annotation?
assembly rna-seq alignment
updated 5.9 years ago by 89k • written 5.9 years ago by ▴ 50
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