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Comment: Comment: Pattern match using R Biostrings
2.9 years ago by asumani ▴ 70
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Comment: Comment: Pattern match using R Biostrings
2.9 years ago by asumani ▴ 70
0
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0
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1.7k
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Comment: Comment: Pattern match using R Biostrings
2.9 years ago by asumani ▴ 70
1
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7
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1.7k
views
Pattern match using R Biostrings
biostrings pattern
updated 2.9 years ago by 89k • written 2.9 years ago by ▴ 70
1
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5
replies
1.4k
views
How to filter BLAST database before search?
BLAST Entrez EntrezQuery
updated 3.2 years ago by ★ 29k • written 3.2 years ago by ▴ 70
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0
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1.4k
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Comment: Comment: How to filter BLAST database before search?
3.2 years ago by asumani ▴ 70
0
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1
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1.4k
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Comment: Comment: How to filter BLAST database before search?
3.2 years ago by asumani ▴ 70
0
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0
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4.8k
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Comment: Comment: Algorithm to remove batch effects
4.3 years ago by asumani ▴ 70
0
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1
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4.8k
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Comment: Comment: Algorithm to remove batch effects
4.3 years ago by asumani ▴ 70
0
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1
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2.0k
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Comment: Comment: Group Genes by Protein Coding/Non-coding feature
4.3 years ago by asumani ▴ 70
1
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5
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2.0k
views
Group Genes by Protein Coding/Non-coding feature
NON-CODING GENE ID_CONVERSION CODING
updated 4.3 years ago by 153k • written 4.3 years ago by ▴ 70
2
votes
1
reply
580
views
Compatilibity between human37 and human38 gtf
GRCh37v75
updated 4.3 years ago by 48k • written 4.3 years ago by ▴ 70
0
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0
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2.7k
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Comment: Comment: Duplicated Gene Symbol names after geneID conversion
4.4 years ago by asumani ▴ 70
1
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2
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2.7k
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Duplicated Gene Symbol names after geneID conversion
geneID
updated 4.4 years ago by 153k • written 4.4 years ago by ▴ 70
7
votes
6
replies
2.2k
views
What happens if a UMI fragment has a PCR artefact?
unique moleculer identifier
updated 4.8 years ago by 22k • written 4.8 years ago by ▴ 70
0
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2
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2.2k
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Comment: A: What happens if a UMI fragment has a PCR artefact?
4.8 years ago by asumani ▴ 70
0
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1
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1.6k
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Comment: C: Normalization for subset of data
4.8 years ago by asumani ▴ 70
0
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3
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1.6k
views
Normalization for subset of data
statistics scRNAseq
4.8 years ago by asumani ▴ 70
0
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0
replies
3.1k
views
Comment: C: How do I convert Hisat2 + stringtie gtf to EVM compatible gff3
4.8 years ago by asumani ▴ 70
0
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1
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1.7k
views
Comment: A: Differential Expression Analysis in Single cell RNAseq
4.8 years ago by asumani ▴ 70
0
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0
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1.7k
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Comment: C: Differential Expression Analysis in Single cell RNAseq
4.8 years ago by asumani ▴ 70
4
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6
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1.7k
views
Differential Expression Analysis in Single cell RNAseq
single-cell RNAseq methods normalization
4.8 years ago by asumani ▴ 70
0
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1
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1.7k
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Comment: C: Differential Expression Analysis in Single cell RNAseq
4.8 years ago by asumani ▴ 70
4
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6
replies
1.4k
views
How reproducible is the DEG analysis?
DEG Analysis
updated 4.9 years ago by 20 • written 5.0 years ago by ▴ 70
0
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0
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3.6k
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Comment: C: PC1 vs PC2 in separating healthy vs disease
4.9 years ago by asumani ▴ 70
0
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1
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3.6k
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Comment: C: PC1 vs PC2 in separating healthy vs disease
4.9 years ago by asumani ▴ 70
0
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0
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3.6k
views
Comment: C: PC1 vs PC2 in separating healthy vs disease
4.9 years ago by asumani ▴ 70
4
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8
replies
3.6k
views
PC1 vs PC2 in separating healthy vs disease
pca rna-seq
4.9 years ago by asumani ▴ 70
0
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2
replies
3.6k
views
Comment: C: PCA1 vs PCA2 in separating healthy vs disease
4.9 years ago by asumani ▴ 70
0
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1
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1.8k
views
Comment: C: Gene vs Transcript Level DEG Analysis
4.9 years ago by asumani ▴ 70
11
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3
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1.8k
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Gene vs Transcript Level DEG Analysis
ballgown RNA-Seq
4.9 years ago by asumani ▴ 70
0
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0
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1.4k
views
Comment: C: How reproducible is the DEG analysis?
5.0 years ago by asumani ▴ 70
0
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1
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1.4k
views
Comment: C: How reproducible is the DEG analysis?
5.0 years ago by asumani ▴ 70
0
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0
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1.4k
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Comment: C: How reproducible is the DEG analysis?
5.0 years ago by asumani ▴ 70
1
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0
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1.0k
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Answer: A: Quality Control After Alignment
5.0 years ago by asumani ▴ 70
2
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1
reply
1.0k
views
Quality Control After Alignment
quality control RNA-Seq HISAT2 scRNA-Seq
5.0 years ago by asumani ▴ 70
0
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0
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3.6k
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Comment: C: How to handle DNA methylation duplication in Bismark?
5.0 years ago by asumani ▴ 70
0
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0
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1.6k
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Comment: C: limma DEG analysis with count matrix as input
5.0 years ago by asumani ▴ 70
0
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2
replies
1.6k
views
limma DEG analysis with count matrix as input
meta-analysis limma microarray
5.0 years ago by asumani ▴ 70
0
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0
replies
764
views
Comment: C: Random 24mers as control data-set
5.4 years ago by asumani ▴ 70
1
vote
2
replies
764
views
Random 24mers as control data-set
rna-seq R
5.4 years ago by asumani ▴ 70
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