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Comment: Comment: Can I infer the fraction of replicating cells from bulk RNA-seq data?
updated 10 weeks ago by 41k • written 10 weeks ago by ▴ 100
2
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3
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387
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Can I infer the fraction of replicating cells from bulk RNA-seq data?
replication apoptosis
updated 10 weeks ago by 41k • written 10 weeks ago by ▴ 100
2
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1
reply
332
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DESeq2 design comparing changes through 2 timepoints of 2 different treatments.
RNA-seq deseq2
updated 10 weeks ago by 13k • written 11 weeks ago by ▴ 100
2
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7
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821
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Tool to search for missing genes among genome annotation versions?
annotation
updated 3 months ago by 3.8k • written 3 months ago by ▴ 100
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1
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821
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Comment: Comment: Tool to search for missing genes among genome annotation versions?
3 months ago by txema.heredia ▴ 100
0
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1
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461
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Help manually processing strand in paired-end reads when fishing for lariats in bulk RNA-seq
lariat splicing rna-seq
5 months ago by txema.heredia ▴ 100
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461
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Answer: Answer: Help manually processing strand in paired-end reads when fishing for lariats in
5 months ago by txema.heredia ▴ 100
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0
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296
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Differential Gene Expression analysis in heterogeneous tissues
RNA-seq deseq2
updated 6 months ago by 41k • written 6 months ago by ▴ 100
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2.5k
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Comment: Comment: Aberrant splicing in bulk RNAseq
6 months ago by txema.heredia ▴ 100
0
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1
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2.5k
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Comment: Comment: Aberrant splicing in bulk RNAseq
6 months ago by txema.heredia ▴ 100
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1
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2.5k
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Comment: Comment: Aberrant splicing in bulk RNAseq
6 months ago by txema.heredia ▴ 100
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2.5k
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Comment: Comment: Aberrant splicing in bulk RNAseq
6 months ago by txema.heredia ▴ 100
0
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2
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2.5k
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Comment: Comment: Aberrant splicing in bulk RNAseq
7 months ago by txema.heredia ▴ 100
0
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1
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2.5k
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Comment: Comment: Aberrant splicing in bulk RNAseq
7 months ago by txema.heredia ▴ 100
0
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1
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2.5k
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Comment: Comment: Aberrant splicing in bulk RNAseq
8 months ago by txema.heredia ▴ 100
0
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324
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BULK mRNA-seq with UMIs. Does it make sense to run bedtools genomecov?
RNAseq gene-length normalization
8 months ago by txema.heredia ▴ 100
13
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21
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2.5k
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6 follow
Aberrant splicing in bulk RNAseq
aberrant-splicing transcript isoform exon
updated 6 months ago by • 0 • written 9 months ago by ▴ 100
0
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0
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2.5k
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Comment: Comment: Aberrant splicing in bulk RNAseq
9 months ago by txema.heredia ▴ 100
0
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1
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2.5k
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Comment: Comment: Aberrant splicing in bulk RNAseq
9 months ago by txema.heredia ▴ 100
0
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0
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1.4k
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Comment: Comment: Mapped reads not mapping to a real sequence?
9 months ago by txema.heredia ▴ 100
0
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3
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1.4k
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Comment: Comment: Mapped reads not mapping to a real sequence?
9 months ago by txema.heredia ▴ 100
0
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1
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1.4k
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Comment: Comment: Mapped reads not mapping to a real sequence?
9 months ago by txema.heredia ▴ 100
0
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0
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1.4k
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Comment: Comment: Mapped reads not mapping to a real sequence?
9 months ago by txema.heredia ▴ 100
0
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1
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1.4k
views
Comment: Comment: Mapped reads not mapping to a real sequence?
9 months ago by txema.heredia ▴ 100
8
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13
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1.4k
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Mapped reads not mapping to a real sequence?
bam sam samtools kallisto
9 months ago by txema.heredia ▴ 100
1
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1
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1.3k
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Comment: Comment: BULK mRNA-seq with UMIs. Do I need to normalize by gene length?
10 months ago by txema.heredia ▴ 100
16
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7
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1.3k
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BULK mRNA-seq with UMIs. Do I need to normalize by gene length?
mRNA UMI normalization illumina DESeq2
updated 10 months ago by 4.2k • written 10 months ago by ▴ 100
0
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0
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1.3k
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Comment: Comment: BULK mRNA-seq with UMIs. Do I need to normalize by gene length?
10 months ago by txema.heredia ▴ 100
0
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1
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1.3k
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Comment: C: Retrieving individual cells from scRNA-seq bigWig files?
3.6 years ago by txema.heredia ▴ 100
2
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4
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1.3k
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Retrieving individual cells from scRNA-seq bigWig files?
single cell RNA-Seq scRNA-seq bigwig
updated 3.6 years ago by 12k • written 3.6 years ago by ▴ 100
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