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Comment: Comment: How do I know the SNPS which are removed when clumping are in a LD block or SNPs
updated 8 months ago by 81k • written 8 months ago by ▴ 70
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3
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830
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How do I know the SNPS which are removed when clumping are in a LD block or SNPs not existed in 1000 Genome
Randomization data clumping Mendelian GWAS
updated 8 months ago by 81k • written 8 months ago by ▴ 70
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3
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419
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How to process batches to be able to correct for its effect
batch-correction sample-randomization
updated 10 months ago by 8.8k • written 10 months ago by ▴ 70
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1
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419
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Comment: Comment: How to process batches to be able to correct for its effect
10 months ago by paria.alipour ▴ 70
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0
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288
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Do I need to include the "ins:me:alu" line for my MR analysis
Randomization Mendelian data stat GWAS Summary
11 months ago by paria.alipour ▴ 70
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2.4k
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Answer: Answer: Low Fraction Reads in Cells (Cellranger Count Pipeline)
13 months ago by paria.alipour ▴ 70
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0
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354
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How to update rsid given chromosome number, chr position, a1 and a2
SNP ID
13 months ago by paria.alipour ▴ 70
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0
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676
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Comment: Comment: Cell composition in each condition of single cell data
14 months ago by paria.alipour ▴ 70
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0
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676
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Comment: Comment: Cell composition in each condition of single cell data
14 months ago by paria.alipour ▴ 70
0
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3
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676
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Cell composition in each condition of single cell data
cell composition single-cell scProportionTest
14 months ago by paria.alipour ▴ 70
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1
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4.9k
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Comment: Comment: correct way of analyzing cell proportions in singlecell data
14 months ago by paria.alipour ▴ 70
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0
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2.1k
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Comment: C: regressing out covariate from Seurat integrated data
16 months ago by paria.alipour ▴ 70
6
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9
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2.1k
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regressing out covariate from Seurat integrated data
single-cell seurat
updated 5 months ago by ▴ 10 • written 16 months ago by ▴ 70
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0
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2.1k
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Comment: A: regressing out covariate from Seurat integrated data
16 months ago by paria.alipour ▴ 70
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0
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2.1k
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Comment: C: regressing out covariate from Seurat integrated data
16 months ago by paria.alipour ▴ 70
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0
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438
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Integration or not?
single-cell RNA sequencing seurat integration
16 months ago by paria.alipour ▴ 70
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0
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911
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Comment: C: Unused argument in R
16 months ago by paria.alipour ▴ 70
4
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8
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911
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Unused argument in R
R
16 months ago by paria.alipour ▴ 70
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0
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1.3k
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Comment: C: How to regress out variants using SCTransform function?
16 months ago by paria.alipour ▴ 70
0
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1
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1.3k
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Comment: C: How to regress out variants using SCTransform function?
16 months ago by paria.alipour ▴ 70
0
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1
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1.3k
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Comment: C: How to regress out variants using SCTransform function?
updated 16 months ago by 8.8k • written 16 months ago by ▴ 70
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1
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1.3k
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Comment: C: How to regress out variants using SCTransform function?
updated 16 months ago by 8.8k • written 16 months ago by ▴ 70
2
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7
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1.3k
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How to regress out variants using SCTransform function?
Single-nuclei RNA sequencing SCTransform Seurat
16 months ago by paria.alipour ▴ 70
0
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0
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388
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single-nuclei 10X genomics sequencing metrics
RNA-Seq sequence
19 months ago by paria.alipour ▴ 70
0
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0
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591
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Integration of 10X genomics single-nuclei RNA seq datasets
RNA-Seq R sequencing
updated 20 months ago by 20 • written 22 months ago by ▴ 70
1
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1
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911
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Answer: A: Unused argument in R
21 months ago by paria.alipour ▴ 70
0
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0
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2.6k
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Comment: C: single-nuclei 10X genomics
22 months ago by paria.alipour ▴ 70
7
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2
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2.6k
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single-nuclei 10X genomics
RNA-Seq R
updated 22 months ago by ★ 13k • written 22 months ago by ▴ 70
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2
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1.1k
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Comment: A: Best package to cluster a single cell dataset using marker gene lists retrieved
22 months ago by paria.alipour ▴ 70
1
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0
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1.6k
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Comment: C: Gene list of Neuronal Markers for TSNE plot
2.1 years ago by paria.alipour ▴ 70
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