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0
votes
3
replies
232
views
HSP of length 0
alignment blastp
updated 29 days ago by 127k • written 29 days ago by ▴ 130
2
votes
2
replies
291
views
All vs all blast - unexpected results
alignment seg blastp
5 weeks ago by timothy.kirkwood ▴ 130
5
votes
6
replies
642
views
NCBI - incomplete protein annotations
ncbi blast refseq
8 weeks ago by timothy.kirkwood ▴ 130
0
votes
0
replies
287
views
homology and protein function inference
homology evolution function
7 months ago by timothy.kirkwood ▴ 130
2
votes
2
replies
331
views
pfam functional redundancy
redundancy protein pfam domain function
10 months ago by timothy.kirkwood ▴ 130
0
votes
0
replies
191
views
Nucleotide codes - gap vs low quality basecalls
assembly ncbi gap basecall nucleotide
10 months ago by timothy.kirkwood ▴ 130
2
votes
3
replies
664
views
BLAST+ v2.10.1 file accessibility
python blastp
17 months ago by timothy.kirkwood ▴ 130
4
votes
3
replies
727
views
Inferring homology from BLAST scores/statistics
statistics blast
updated 17 months ago by ★ 23k • written 17 months ago by ▴ 130
1
vote
2
replies
704
views
Remote blast query limit
remote blast
18 months ago by timothy.kirkwood ▴ 130
0
votes
4
replies
1.3k
views
BLAST masking
masking database blastp
19 months ago by timothy.kirkwood ▴ 130
0
votes
0
replies
348
views
BLASTP - parameters for soft filtering and smith-waterman alignment
seg soft-filtering blastp
updated 20 months ago by 38k • written 20 months ago by ▴ 130
0
votes
0
replies
340
views
Visualising SeqRecords with compound locations
genbank snapgene benchling biopython
21 months ago by timothy.kirkwood ▴ 130
2
votes
1
reply
591
views
Biopython SeqRecord alphabet compatibility
alphabet biopython
21 months ago by timothy.kirkwood ▴ 130
3
votes
2
replies
1.4k
views
What are the makeblastdb database files doing?
blastp database
21 months ago by timothy.kirkwood ▴ 130
17
votes
14
replies
1.3k
views
6 follow
Orthologs vs PFAM
ortholog pfam
updated 19 months ago by 14k • written 21 months ago by ▴ 130
0
votes
2
replies
500
views
Building a phylogenetic tree from different ortholog groups
COGs phylogenetics msa
21 months ago by timothy.kirkwood ▴ 130
1
vote
2
replies
609
views
BLASTP local vs website
blastp
21 months ago by timothy.kirkwood ▴ 130
3
votes
2
replies
1.1k
views
Nucleotide BLAST
BLAST
updated 22 months ago by 14k • written 22 months ago by ▴ 130
8
votes
9
replies
1.0k
views
BLASTP - HSPs and bitscores
BLASTP hsp bit-score
updated 2.0 years ago by 14k • written 2.0 years ago by ▴ 130
7
votes
4
replies
2.0k
views
BLAST parallelisation best practices
multiprocessing python3.7 num_threads BLASTP
updated 6 days ago by 38k • written 2.1 years ago by ▴ 130
2
votes
2
replies
1.1k
views
Building a BLAST database with the python subprocess module
python3.7 subprocess makeblastdb
updated 6 days ago by 38k • written 2.3 years ago by ▴ 130
5
votes
6
replies
1.4k
views
Joining multiple query keys in entrez Efetch
entrez Efetch biopython NCBI
2.4 years ago by timothy.kirkwood ▴ 130
2
votes
6
replies
1.1k
views
MultiGeneBlast gui vs command prompt
MultiGeneBlast antiSMASH v5
2.4 years ago by timothy.kirkwood ▴ 130
4
votes
5
replies
2.1k
views
IDT vs primer 3 - PCR dimerisation
PCR primer3 IDT primer
2.6 years ago by timothy.kirkwood ▴ 130
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