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452
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Bulk searching UniProt
uniprot
updated 29 days ago by ★ 2.4k • written 4 weeks ago by ▴ 140
4
votes
6
replies
4.6k
views
IDT vs primer 3 - PCR dimerisation
PCR primer3 IDT primer
updated 19 months ago by • 0 • written 4.7 years ago by ▴ 140
3
votes
4
replies
1.3k
views
remote tblastn database name(s)
blast database tblastn
updated 23 months ago by ★ 29k • written 23 months ago by ▴ 140
0
votes
3
replies
825
views
HSP of length 0
alignment blastp
updated 2.2 years ago by 150k • written 2.2 years ago by ▴ 140
2
votes
2
replies
1.1k
views
All vs all blast - unexpected results
alignment seg blastp
2.2 years ago by timothy.kirkwood ▴ 140
5
votes
6
replies
2.0k
views
NCBI - incomplete protein annotations
ncbi blast refseq
2.2 years ago by timothy.kirkwood ▴ 140
0
votes
0
replies
602
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homology and protein function inference
homology evolution function
2.7 years ago by timothy.kirkwood ▴ 140
2
votes
2
replies
866
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pfam functional redundancy
redundancy protein pfam domain function
2.9 years ago by timothy.kirkwood ▴ 140
0
votes
0
replies
574
views
Nucleotide codes - gap vs low quality basecalls
assembly ncbi gap basecall nucleotide
3.0 years ago by timothy.kirkwood ▴ 140
2
votes
3
replies
1.2k
views
BLAST+ v2.10.1 file accessibility
python blastp
3.5 years ago by timothy.kirkwood ▴ 140
4
votes
3
replies
1.4k
views
Inferring homology from BLAST scores/statistics
statistics blast
updated 3.6 years ago by ★ 29k • written 3.6 years ago by ▴ 140
1
vote
2
replies
1.7k
views
Remote blast query limit
remote blast
3.6 years ago by timothy.kirkwood ▴ 140
0
votes
4
replies
3.0k
views
BLAST masking
masking database blastp
3.7 years ago by timothy.kirkwood ▴ 140
0
votes
0
replies
659
views
BLASTP - parameters for soft filtering and smith-waterman alignment
seg soft-filtering blastp
updated 3.8 years ago by 45k • written 3.8 years ago by ▴ 140
0
votes
0
replies
657
views
Visualising SeqRecords with compound locations
genbank snapgene benchling biopython
3.8 years ago by timothy.kirkwood ▴ 140
2
votes
1
reply
1.1k
views
Biopython SeqRecord alphabet compatibility
alphabet biopython
3.8 years ago by timothy.kirkwood ▴ 140
3
votes
2
replies
3.1k
views
What are the makeblastdb database files doing?
blastp database
3.8 years ago by timothy.kirkwood ▴ 140
17
votes
14
replies
2.7k
views
6 follow
Orthologs vs PFAM
ortholog pfam
updated 3.7 years ago by 15k • written 3.9 years ago by ▴ 140
0
votes
2
replies
1.0k
views
Building a phylogenetic tree from different ortholog groups
COGs phylogenetics msa
3.9 years ago by timothy.kirkwood ▴ 140
1
vote
2
replies
1.0k
views
BLASTP local vs website
blastp
3.9 years ago by timothy.kirkwood ▴ 140
3
votes
2
replies
1.8k
views
Nucleotide BLAST
BLAST
updated 3.9 years ago by 15k • written 3.9 years ago by ▴ 140
8
votes
9
replies
2.8k
views
BLASTP - HSPs and bitscores
BLASTP hsp bit-score
updated 4.1 years ago by 15k • written 4.1 years ago by ▴ 140
7
votes
4
replies
5.3k
views
BLAST parallelisation best practices
multiprocessing python3.7 num_threads BLASTP
updated 2.1 years ago by 45k • written 4.2 years ago by ▴ 140
2
votes
2
replies
2.2k
views
Building a BLAST database with the python subprocess module
python3.7 subprocess makeblastdb
updated 2.1 years ago by 45k • written 4.4 years ago by ▴ 140
5
votes
6
replies
3.3k
views
Joining multiple query keys in entrez Efetch
entrez Efetch biopython NCBI
4.5 years ago by timothy.kirkwood ▴ 140
2
votes
6
replies
1.9k
views
MultiGeneBlast gui vs command prompt
MultiGeneBlast antiSMASH v5
4.5 years ago by timothy.kirkwood ▴ 140
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