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1
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0
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570
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Comment:
Comment: NCBI - incomplete protein annotations
19 days ago by
timothy.kirkwood
▴ 130
5
votes
6
replies
570
views
NCBI - incomplete protein annotations
ncbi
blast
refseq
11 days ago by
timothy.kirkwood
▴ 130
1
vote
0
replies
570
views
Answer:
Answer: NCBI - incomplete protein annotations
11 days ago by
timothy.kirkwood
▴ 130
0
votes
1
reply
570
views
Comment:
Comment: NCBI - incomplete protein annotations
19 days ago by
timothy.kirkwood
▴ 130
0
votes
1
reply
570
views
Comment:
Comment: NCBI - incomplete protein annotations
4 weeks ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
6.5k
views
Comment:
Comment: BLAST Database error: Error pre-fetching sequence data
5 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
590
views
Answer:
Answer: How can I find gene cluster containing certain gene?
6 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
269
views
homology and protein function inference
homology
evolution
function
6 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
1.3k
views
Comment:
Comment: Identifying BGC's coexpression (antismash)
7 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
309
views
Comment:
Comment: pfam functional redundancy
8 months ago by
timothy.kirkwood
▴ 130
2
votes
2
replies
309
views
pfam functional redundancy
redundancy
protein
pfam
domain
function
8 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
175
views
Nucleotide codes - gap vs low quality basecalls
assembly
ncbi
gap
basecall
nucleotide
9 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
1.0k
views
Answer:
Answer: antiSMASH output
9 months ago by
timothy.kirkwood
▴ 130
2
votes
3
replies
637
views
BLAST+ v2.10.1 file accessibility
python
blastp
15 months ago by
timothy.kirkwood
▴ 130
1
vote
0
replies
637
views
Answer:
Answer: BLAST+ v2.10.1 file accessibility
15 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
637
views
Comment:
Comment: BLAST+ v2.10.1 file accessibility
15 months ago by
timothy.kirkwood
▴ 130
0
votes
1
reply
689
views
Comment:
Comment: Inferring homology from BLAST scores/statistics
16 months ago by
timothy.kirkwood
▴ 130
4
votes
3
replies
689
views
Inferring homology from BLAST scores/statistics
statistics
blast
updated 16 months ago by
Mensur Dlakic
★ 22k • written 16 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
2.9k
views
Comment:
Comment: remote command line BLAST job ends in CPU error and gives MBEDTLS version mismat
17 months ago by
timothy.kirkwood
▴ 130
0
votes
1
reply
2.9k
views
Comment:
Comment: remote command line BLAST job ends in CPU error and gives MBEDTLS version mismat
17 months ago by
timothy.kirkwood
▴ 130
0
votes
1
reply
2.9k
views
Comment:
Comment: remote command line BLAST job ends in CPU error and gives MBEDTLS version mismat
17 months ago by
timothy.kirkwood
▴ 130
1
vote
0
replies
4.2k
views
Comment:
Comment: How to run local BLAST (Standalone NCBI BLAST+) with Python?
17 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
652
views
Comment:
Comment: Remote blast query limit
17 months ago by
timothy.kirkwood
▴ 130
1
vote
2
replies
652
views
Remote blast query limit
remote
blast
17 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
1.2k
views
Comment:
Comment: BLAST masking
17 months ago by
timothy.kirkwood
▴ 130
0
votes
1
reply
1.2k
views
Comment:
Comment: BLAST masking
17 months ago by
timothy.kirkwood
▴ 130
0
votes
4
replies
1.2k
views
BLAST masking
masking
database
blastp
17 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
328
views
BLASTP - parameters for soft filtering and smith-waterman alignment
seg
soft-filtering
blastp
updated 19 months ago by
Ram
37k • written 19 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
317
views
Visualising SeqRecords with compound locations
genbank
snapgene
benchling
biopython
19 months ago by
timothy.kirkwood
▴ 130
2
votes
1
reply
566
views
Biopython SeqRecord alphabet compatibility
alphabet
biopython
19 months ago by
timothy.kirkwood
▴ 130
2
votes
0
replies
566
views
Answer:
Answer: Biopython SeqRecord alphabet compatibility
19 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
1.2k
views
Comment:
Comment: What are the makeblastdb database files doing?
19 months ago by
timothy.kirkwood
▴ 130
3
votes
2
replies
1.2k
views
What are the makeblastdb database files doing?
blastp
database
19 months ago by
timothy.kirkwood
▴ 130
1
vote
1
reply
726
views
Answer:
Answer: Co-occurrence of proteins of two families
19 months ago by
timothy.kirkwood
▴ 130
1
vote
0
replies
1.2k
views
Comment:
Comment: Orthologs vs PFAM
20 months ago by
timothy.kirkwood
▴ 130
0
votes
1
reply
1.2k
views
Comment:
Comment: Orthologs vs PFAM
20 months ago by
timothy.kirkwood
▴ 130
0
votes
2
replies
1.2k
views
Comment:
Comment: Orthologs vs PFAM
20 months ago by
timothy.kirkwood
▴ 130
17
votes
14
replies
1.2k
views
6 follow
Orthologs vs PFAM
ortholog
pfam
updated 18 months ago by
lieven.sterck
14k • written 20 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
487
views
Comment:
Comment: Building a phylogenetic tree from different ortholog groups
20 months ago by
timothy.kirkwood
▴ 130
0
votes
2
replies
487
views
Building a phylogenetic tree from different ortholog groups
COGs
phylogenetics
msa
20 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
578
views
Comment:
Comment: BLASTP local vs website
20 months ago by
timothy.kirkwood
▴ 130
1
vote
2
replies
578
views
BLASTP local vs website
blastp
20 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
981
views
Comment:
Comment: Nucleotide BLAST
20 months ago by
timothy.kirkwood
▴ 130
3
votes
2
replies
981
views
Nucleotide BLAST
BLAST
updated 20 months ago by
lieven.sterck
14k • written 20 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
753
views
Answer:
Answer: Scoring Metric Gene Clusters (General Inquiry)
22 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
1.3k
views
Answer:
A: antismash 5.0 (New region concept) - counting BGCs
22 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
726
views
Answer:
A: Which Bioinformatic tools are used for NRPS Domain analysis?
22 months ago by
timothy.kirkwood
▴ 130
0
votes
0
replies
942
views
Comment:
C: BLASTP - HSPs and bitscores
23 months ago by
timothy.kirkwood
▴ 130
0
votes
1
reply
942
views
Comment:
C: BLASTP - HSPs and bitscores
23 months ago by
timothy.kirkwood
▴ 130
0
votes
2
replies
942
views
Comment:
C: BLASTP - HSPs and bitscores
23 months ago by
timothy.kirkwood
▴ 130
71 results • Page
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