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0
votes
0
replies
508
views
Tajima-Nei Distance estimate with BioPerl
DNA
Perl
BioPerl
Tajima-Nei_Distance
3.0 years ago by
mauricio.1313
• 0
0
votes
0
replies
568
views
Big difference in "free parameter" (np) in Sites Models for different models with CODEML (PAML)
Site-Models
sequence
PAML
evolution
CODEML
3.1 years ago by
mauricio.1313
• 0
5
votes
5
replies
1.4k
views
NetNGlyc: input sequence names are not unique: What means?
gene
sequence
glycosilation
site-predictor
updated 3.1 years ago by
Mensur Dlakic
★ 27k • written 3.1 years ago by
mauricio.1313
• 0
0
votes
0
replies
1.4k
views
Comment:
C: NetNGlyc: input sequence names are not unique: What means?
3.1 years ago by
mauricio.1313
• 0
0
votes
1
reply
1.4k
views
Comment:
C: NetNGlyc: input sequence names are not unique: What means?
3.1 years ago by
mauricio.1313
• 0
0
votes
0
replies
699
views
How find the best model for calculate dN/dS with big data (727 sequences)?
gene
PAML
CODEML
evolution
sequence
3.2 years ago by
mauricio.1313
• 0
0
votes
0
replies
480
views
Suggestions for analyze dN, dS rate and omega (dN/dS ratio) result?
sequence
gene
updated 3.2 years ago by
GenoMax
141k • written 3.2 years ago by
mauricio.1313
• 0
0
votes
1
reply
1.1k
views
Likelihood distance matrix ( .mldist) to .csv or .txt
iqtree
likelihood
mldist
R
python
updated 3.3 years ago by
Biostar
20 • written 3.5 years ago by
mauricio.1313
• 0
1
vote
1
reply
611
views
Viral Genome Alignment in MAFFT
genome
alignment
sequence
updated 3.5 years ago by
Biostar
20 • written 3.6 years ago by
mauricio.1313
• 0
0
votes
1
reply
766
views
Mapping the dN/dS values
sequence
dN/dS
3.5 years ago by
mauricio.1313
• 0
1
vote
1
reply
538
views
Substitution model for a viral genome in RAxML
sequence
genome
RAxML
updated 3.6 years ago by
Mensur Dlakic
★ 27k • written 3.6 years ago by
mauricio.1313
• 0
3
votes
3
replies
1.8k
views
Hypothetical protein in Prokka
assembly
prokka
genome
updated 3.6 years ago by
Mensur Dlakic
★ 27k • written 3.6 years ago by
mauricio.1313
• 0
0
votes
0
replies
732
views
Comment:
A: raxmlGUI spend time
3.6 years ago by
mauricio.1313
• 0
1
vote
2
replies
732
views
raxmlGUI spend time
genome
alignment
sequence
3.6 years ago by
mauricio.1313
• 0
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