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0
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402
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Best codeml model for estimating omega, M0 ?
codeml ete3 evol
19 months ago by Adrian Pelin ★ 2.7k
0
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1
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799
views
PAML/codeml Poxvirus dN/dS
dNdS codeml selection
updated 2.1 years ago by ▴ 570 • written 2.1 years ago by ★ 2.7k
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0
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1.2k
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Comment: Comment: Estimating mRNA 5' degradation from RNA-seq illumina strand-specific reads
3.0 years ago by Adrian Pelin ★ 2.7k
2
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2
replies
1.2k
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Estimating mRNA 5' degradation from RNA-seq illumina strand-specific reads
mRNA decay RNA-seq
3.0 years ago by Adrian Pelin ★ 2.7k
3
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1
reply
735
views
Differential pathways between 2 gene sets
enrichment GO KEGG
updated 3.1 years ago by 13k • written 3.1 years ago by ★ 2.7k
2
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4
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4.1k
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List of human protein coding genes with given name (known function?)
RNA-Seq Annotation Human
updated 4.2 years ago by ★ 9.6k • written 6.2 years ago by ★ 2.7k
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1
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1.4k
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Comment: C: Need opinion on correct bioinfo analysis; NGS on virus competition exp
5.6 years ago by Adrian Pelin ★ 2.7k
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0
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1.4k
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Comment: C: Need opinion on correct bioinfo analysis; NGS on virus competition exp
5.6 years ago by Adrian Pelin ★ 2.7k
0
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1
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1.4k
views
Comment: C: Need opinion on correct bioinfo analysis; NGS on virus competition exp
5.6 years ago by Adrian Pelin ★ 2.7k
0
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6
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1.4k
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Need opinion on correct bioinfo analysis; NGS on virus competition exp
Abundace RNA-Seq
5.6 years ago by Adrian Pelin ★ 2.7k
0
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6
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5.3k
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Blast2Go Local Www-Blast Not Working
updated 5.6 years ago by 20 • written 11.9 years ago by ★ 2.7k
0
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1
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2.6k
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Comment: C: Test for recombination in a clonal tetraploid?
updated 5.8 years ago by 45k • written 11.4 years ago by ★ 2.7k
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0
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3.1k
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Comment: C: Linkage Disequlibirum (R^2) = recombination?
updated 5.8 years ago by 45k • written 11.4 years ago by ★ 2.7k
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1
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28k
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Comment: C: Calculate Per Exon/Per Gene Coverage
updated 5.8 years ago by 45k • written 11.4 years ago by ★ 2.7k
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1
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28k
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Comment: C: Calculate Per Exon/Per Gene Coverage
updated 5.8 years ago by 45k • written 11.4 years ago by ★ 2.7k
1
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2
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5.2k
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Answer: A: How to assemble the bacterial genome; spades
updated 5.8 years ago by 45k • written 9.8 years ago by ★ 2.7k
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0
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5.4k
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Comment: C: Merging Bayesian probability values with bootstraps from ML
updated 5.8 years ago by 45k • written 11.5 years ago by ★ 2.7k
0
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1
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26k
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Comment: C: Efficiently process (view, analize, clip ends, convert, demultiplex, dereplicate
updated 5.8 years ago by 45k • written 11.1 years ago by ★ 2.7k
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1
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9.6k
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Comment: C: bedtools: extracting no coverage regions
updated 5.8 years ago by 45k • written 11.5 years ago by ★ 2.7k
0
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1
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7.9k
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Comment: C: Error in SNP calling, samtools
updated 5.9 years ago by 45k • written 11.3 years ago by ★ 2.7k
1
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1
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4.2k
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Answer: A: finding reads from fastq files corresponds to particular transcript from fasta f
updated 5.9 years ago by 45k • written 9.9 years ago by ★ 2.7k
1
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1
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2.1k
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Answer: A: Where to find the reference genome from the Human Genome Project?
updated 5.9 years ago by 45k • written 10.0 years ago by ★ 2.7k
2
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1
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7.9k
views
Answer: A: How to draw a coverage vs GC content plot for assembled transcriptome?
updated 5.9 years ago by 45k • written 10.0 years ago by ★ 2.7k
1
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1
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14k
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Comment: Comment: DNA composition - all k-mers and their frequency in some sequencing data
updated 3.2 years ago by 45k • written 10.0 years ago by ★ 2.7k
1
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1
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14k
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Comment: C: DNA composition - all k-mers and their frequency in some sequencing data
updated 5.9 years ago by 45k • written 10.0 years ago by ★ 2.7k
1
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1
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14k
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Comment: C: DNA composition - all k-mers and their frequency in some sequencing data
updated 5.9 years ago by 45k • written 10.0 years ago by ★ 2.7k
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0
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20k
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Comment: C: How to remove contamination from the transcriptome assembly
updated 5.9 years ago by 45k • written 9.9 years ago by ★ 2.7k
0
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1
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20k
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Comment: C: How to remove contamination from the transcriptome assembly
updated 5.9 years ago by 45k • written 9.9 years ago by ★ 2.7k
1
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0
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6.6k
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Answer: A: adding suffix /1 & /2 to PE data - abyss input data
updated 5.9 years ago by 45k • written 10.0 years ago by ★ 2.7k
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0
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6.6k
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Comment: C: adding suffix /1 & /2 to PE data - abyss input data
updated 5.9 years ago by 45k • written 10.0 years ago by ★ 2.7k
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0
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3.7k
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Comment: C: VelvetOptimizer:Error in running the program
updated 5.9 years ago by 45k • written 10.0 years ago by ★ 2.7k
2
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3
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2.6k
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Advice on DE analysis of mouse and human merged RNA-seq data
RNA-Seq DEseq Human Mouse
updated 6.0 years ago by 15k • written 6.1 years ago by ★ 2.7k
1
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1
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25k
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Comment: C: Recommendations For Heterozygous Genome Assembly Software
updated 6.0 years ago by 45k • written 10.5 years ago by ★ 2.7k
0
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1
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5.6k
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Comment: C: How to assess coverage of Ray metagenomic assemblies
updated 6.0 years ago by 45k • written 10.6 years ago by ★ 2.7k
1
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0
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20k
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Comment: C: How To Combine Two Samtools Commands.
updated 6.0 years ago by 45k • written 10.0 years ago by ★ 2.7k
2
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2
replies
9.3k
views
Comment: C: please some one help me step by step i was really exhausted
updated 6.0 years ago by 45k • written 10.9 years ago by ★ 2.7k
1
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1
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9.3k
views
Comment: Comment: please some one help me step by step i was really exhausted
updated 3.7 years ago by 45k • written 10.9 years ago by ★ 2.7k
9
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3
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9.3k
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Answer: A: please some one help me step by step i was really exhausted
updated 6.0 years ago by 45k • written 10.9 years ago by ★ 2.7k
0
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0
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5.1k
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Comment: C: installation of artemis on linux redhat
updated 6.1 years ago by 45k • written 11.4 years ago by ★ 2.7k
1
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2
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12k
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Comment: C: MrBayes: Implementing the LG model
updated 6.1 years ago by 45k • written 10.9 years ago by ★ 2.7k
1
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2
replies
12k
views
Comment: C: MrBayes: Implementing the LG model
updated 6.1 years ago by 45k • written 10.9 years ago by ★ 2.7k
4
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2
replies
12k
views
Answer: A: MrBayes: Implementing the LG model
updated 6.1 years ago by 45k • written 11.5 years ago by ★ 2.7k
0
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1
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23k
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Comment: A: Pathway Enrichment Analysis, Clustering and Scoring with pathfindR
6.1 years ago by Adrian Pelin ★ 2.7k
1
vote
11
replies
5.2k
views
bedtools merge - removing features completly overlapped by other features
bedtools
updated 6.1 years ago by ▴ 40 • written 8.1 years ago by ★ 2.7k
0
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0
replies
5.9k
views
Answer: A: Ka/Ks (Or Dn/Ds) Calculation From Sequenced Transcriptome Contigs
6.1 years ago by Adrian Pelin ★ 2.7k
0
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1
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2.8k
views
Comment: C: Crazy high file size for human genome from Ensembl
6.2 years ago by Adrian Pelin ★ 2.7k
10
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3
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2.8k
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Crazy high file size for human genome from Ensembl
Ensembl
updated 6.2 years ago by 24k • written 6.2 years ago by ★ 2.7k
0
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0
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2.4k
views
Comment: C: How can I reproduce features of signalp TMHMM and phobius?
6.2 years ago by Adrian Pelin ★ 2.7k
0
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1
reply
4.1k
views
Comment: C: List of human protein coding genes with given name (known function?)
6.2 years ago by Adrian Pelin ★ 2.7k
0
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1
reply
2.4k
views
Comment: C: Extracting reads mapping to CDS regions but not the first 45bp after ATG
6.2 years ago by Adrian Pelin ★ 2.7k
509 results • Page 1 of 11
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