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Comment:
Comment: Editing Human Reference Genome by adding a CDS
5 weeks ago by
LDT
▴ 340
2
votes
3
replies
417
views
Editing Human Reference Genome by adding a CDS
gff
agat
transcriptome
updated 5 weeks ago by
Michael
54k • written 5 weeks ago by
LDT
▴ 340
1
vote
2
replies
974
views
How to Modify Reference Sequence and Annotation Files
reference
edit
annotation
updated 10 weeks ago by
yeastbuddy
• 0 • written 2.2 years ago by
LDT
▴ 340
11
votes
3
replies
884
views
Whole genome comparison of two closely related plant species
mummer
comparative-genomics
whole-genome-alignment
whole-genome-comparison
mauve
updated 13 months ago by
SanjidaR_NCBI
▴ 60 • written 13 months ago by
LDT
▴ 340
5
votes
9
replies
4.0k
views
Transform a data.frame to GRranges in R
GenomicRanges
R
data.frame
bed
updated 17 months ago by
Mannu
• 0 • written 22 months ago by
LDT
▴ 340
1
vote
0
replies
1.4k
views
Comment:
Comment: Understanding 1/1 output in VCF
18 months ago by
LDT
▴ 340
6
votes
8
replies
1.4k
views
Understanding 1/1 output in VCF
vcf
18 months ago by
LDT
▴ 340
0
votes
1
reply
1.4k
views
Comment:
Comment: Understanding 1/1 output in VCF
18 months ago by
LDT
▴ 340
0
votes
1
reply
1.4k
views
Comment:
Comment: Understanding 1/1 output in VCF
18 months ago by
LDT
▴ 340
0
votes
0
replies
1.1k
views
Comment:
Comment: How to find newly submitted accessions in NCBI
18 months ago by
LDT
▴ 340
0
votes
1
reply
1.1k
views
Comment:
Comment: How to find newly submitted accessions in NCBI
18 months ago by
LDT
▴ 340
0
votes
1
reply
1.1k
views
Comment:
Comment: How to find newly submitted accessions in NCBI
18 months ago by
LDT
▴ 340
5
votes
7
replies
1.1k
views
How to find newly submitted accessions in NCBI
ncbi
updated 13 months ago by
corrector
▴ 30 • written 18 months ago by
LDT
▴ 340
2
votes
1
reply
895
views
Convert a bed file to bigbed
bed
bed12
ucsc
updated 18 months ago by
Matthias Zepper
4.6k • written 18 months ago by
LDT
▴ 340
0
votes
1
reply
951
views
Comment:
Comment: error: Couldn't open trackDb.txt in hubCheck
18 months ago by
LDT
▴ 340
7
votes
1
reply
3.2k
views
Remove multiple samples from a VCF file using bcftools
vcf
bcftools
vcftools
updated 18 months ago by
Pierre Lindenbaum
162k • written 18 months ago by
LDT
▴ 340
3
votes
0
replies
3.9k
views
Answer:
Answer: Genome annotation: convert gtf to gff3 file
18 months ago by
LDT
▴ 340
0
votes
0
replies
951
views
Comment:
Comment: error: Couldn't open trackDb.txt in hubCheck
18 months ago by
LDT
▴ 340
0
votes
1
reply
951
views
Comment:
Comment: error: Couldn't open trackDb.txt in hubCheck
18 months ago by
LDT
▴ 340
5
votes
6
replies
951
views
error: Couldn't open trackDb.txt in hubCheck
UCSC
hubCheck
updated 18 months ago by
seidel
11k • written 18 months ago by
LDT
▴ 340
0
votes
0
replies
965
views
Comment:
Comment: Error while converting a bed to bigBed file
18 months ago by
LDT
▴ 340
0
votes
1
reply
965
views
Comment:
Comment: Error while converting a bed to bigBed file
18 months ago by
LDT
▴ 340
0
votes
0
replies
619
views
Comment:
Comment: Convert gff to bed, including non coding elements
18 months ago by
LDT
▴ 340
4
votes
2
replies
619
views
Convert gff to bed, including non coding elements
bed
RNA
non-coding
gff
18 months ago by
LDT
▴ 340
0
votes
0
replies
1.0k
views
Answer:
Answer: How to change colors in boxplot in R?
updated 18 months ago by
Ram
44k • written 18 months ago by
LDT
▴ 340
4
votes
4
replies
965
views
Error while converting a bed to bigBed file
bed
UCSC
kentUtils
bigBed
18 months ago by
LDT
▴ 340
1
vote
2
replies
1.3k
views
How to measure pairwise genetic distance in all samples of a VCF file
pop-gen
pairwise-distance
VCF
updated 18 months ago by
chrchang523
10k • written 18 months ago by
LDT
▴ 340
1
vote
1
reply
617
views
Calculate missing genotypes per sample with plink2
missing
vcf
plink2
genotypes
updated 18 months ago by
chrchang523
10k • written 19 months ago by
LDT
▴ 340
0
votes
1
reply
61k
views
Comment:
Comment: How To Sort Bed Format File
19 months ago by
LDT
▴ 340
0
votes
0
replies
1.1k
views
Comment:
Comment: How to convert transcript counts to gene counts
19 months ago by
LDT
▴ 340
1
vote
4
replies
1.1k
views
How to convert transcript counts to gene counts
tximport
r
gene_counts
RNAseq
updated 19 months ago by
manaswwm
▴ 510 • written 19 months ago by
LDT
▴ 340
0
votes
0
replies
4.1k
views
Comment:
Comment: Arabidopsis Araport11 genome annotation file
19 months ago by
LDT
▴ 340
3
votes
5
replies
2.2k
views
Count missing and non missing values in a VCF file
vcf
bcftools
vcftools
updated 19 months ago by
raphael.B
▴ 520 • written 19 months ago by
LDT
▴ 340
1
vote
1
reply
546
views
Answer:
Answer: How to change values on X-axis in matplotlib ?
19 months ago by
LDT
▴ 340
0
votes
1
reply
2.2k
views
Comment:
Comment: Count missing and non missing values in a VCF file
19 months ago by
LDT
▴ 340
0
votes
1
reply
4.1k
views
Comment:
Comment: Arabidopsis Araport11 genome annotation file
19 months ago by
LDT
▴ 340
8
votes
8
replies
901
views
How to convert heterozygous variants to ./. in a VCF file?
heterozygosity
vcf
bcftools
updated 19 months ago by
Ram
44k • written 19 months ago by
LDT
▴ 340
0
votes
1
reply
901
views
Comment:
Comment: How to convert heterozygous variants to ./. in a VCF file?
19 months ago by
LDT
▴ 340
0
votes
1
reply
901
views
Comment:
Comment: How to convert heterozygous variants to ./. in a VCF file?
19 months ago by
LDT
▴ 340
0
votes
0
replies
901
views
Comment:
Comment: How to convert heterozygous variants to ./. in a VCF file?
updated 19 months ago by
Ram
44k • written 19 months ago by
LDT
▴ 340
0
votes
0
replies
1.1k
views
Comment:
Comment: How do you obtain a list of transcription factors from a genome?
19 months ago by
LDT
▴ 340
0
votes
1
reply
1.1k
views
Comment:
Comment: How do you obtain a list of transcription factors from a genome?
19 months ago by
LDT
▴ 340
2
votes
1
reply
1.1k
views
Answer:
Answer: How do you obtain a list of transcription factors from a genome?
19 months ago by
LDT
▴ 340
1
vote
0
replies
756
views
Comment:
Comment: How do I understand -Z option of infernal cmscan?
19 months ago by
LDT
▴ 340
3
votes
1
reply
756
views
Answer:
Answer: How do I understand -Z option of infernal cmscan?
19 months ago by
LDT
▴ 340
0
votes
1
reply
1.4k
views
Comment:
Comment: How to convert a for loop to a Job-array in LSF cluster
19 months ago by
LDT
▴ 340
3
votes
2
replies
1.8k
views
Answer:
Answer: How to select rows which has NA in any column in the dataframe in R?
19 months ago by
LDT
▴ 340
7
votes
6
replies
1.4k
views
How to convert a for loop to a Job-array in LSF cluster
lsf
cluster-computing
Job-array
hpc
updated 19 months ago by
5heikki
11k • written 19 months ago by
LDT
▴ 340
0
votes
0
replies
1.4k
views
Comment:
Comment: How to convert a for loop to a Job-array in LSF cluster
19 months ago by
LDT
▴ 340
0
votes
1
reply
17k
views
Comment:
Comment: How to update rlang in R?
20 months ago by
LDT
▴ 340
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