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Comment: Comment: FeatureCounts alters gene IDs?
2.1 years ago by Shraddha ▴ 90
2
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3
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801
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FeatureCounts alters gene IDs?
hisat2 deseq2 featurecount differential-expression-analysis
updated 2.1 years ago by 141k • written 2.1 years ago by ▴ 90
0
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1.5k
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Comment: Comment: GSEA run with just RNK file
2.1 years ago by Shraddha ▴ 90
0
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1
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1.4k
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Comment: Comment: Compare two scatter plots? Statistical test?
2.1 years ago by Shraddha ▴ 90
0
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1
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617
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Comment: Comment: How to find log2fold change values comparing multiple subgroups
2.1 years ago by Shraddha ▴ 90
3
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3
replies
617
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How to find log2fold change values comparing multiple subgroups
DESeq2 differential-expression
updated 2.1 years ago by 81k • written 2.1 years ago by ▴ 90
0
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0
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1.9k
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Comment: Comment: BLASTn produces empty output + output is 'Killed'
2.2 years ago by Shraddha ▴ 90
0
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0
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1.9k
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Comment: Comment: BLASTn produces empty output + output is 'Killed'
2.2 years ago by Shraddha ▴ 90
0
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1
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1.9k
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Comment: Comment: BLASTn produces empty output + output is 'Killed'
2.2 years ago by Shraddha ▴ 90
1
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8
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1.9k
views
BLASTn produces empty output + output is 'Killed'
blastn blast
2.2 years ago by Shraddha ▴ 90
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0
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532
views
Answer: Answer: BLASTn protein identity sequence
2.2 years ago by Shraddha ▴ 90
1
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0
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3.3k
views
Comment: Comment: issues with agrigo V2
2.2 years ago by Shraddha ▴ 90
0
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0
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981
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Answer: Answer: How do I get a gtf file to use rnaQUAST
2.2 years ago by Shraddha ▴ 90
0
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0
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2.2k
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Comment: Comment: Efetch from eutilities gives '400 Bad Request'; how to fix this?
2.2 years ago by Shraddha ▴ 90
0
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1
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2.2k
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Comment: Comment: Efetch from eutilities gives '400 Bad Request'; how to fix this?
2.2 years ago by Shraddha ▴ 90
1
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0
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2.2k
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Comment: Comment: Efetch from eutilities gives '400 Bad Request'; how to fix this?
2.2 years ago by Shraddha ▴ 90
0
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1
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2.2k
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Comment: Comment: Efetch from eutilities gives '400 Bad Request'; how to fix this?
updated 2.2 years ago by 141k • written 2.2 years ago by ▴ 90
0
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1
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2.2k
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Comment: Comment: Efetch from eutilities gives '400 Bad Request'; how to fix this?
2.2 years ago by Shraddha ▴ 90
0
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0
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2.2k
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Comment: Comment: Efetch from eutilities gives '400 Bad Request'; how to fix this?
2.2 years ago by Shraddha ▴ 90
0
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1
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2.2k
views
Comment: Comment: Efetch from eutilities gives '400 Bad Request'; how to fix this?
2.2 years ago by Shraddha ▴ 90
0
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2
replies
2.2k
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Comment: Comment: Efetch from eutilities gives '400 Bad Request'; how to fix this?
2.2 years ago by Shraddha ▴ 90
0
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1
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2.2k
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Comment: Comment: Efetch from eutilities gives '400 Bad Request'; how to fix this?
2.2 years ago by Shraddha ▴ 90
5
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19
replies
2.2k
views
Efetch from eutilities gives '400 Bad Request'; how to fix this?
linux while-loop eutilities
2.2 years ago by Shraddha ▴ 90
2
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0
replies
16k
views
Answer: Answer: List Of Bioinformatics Books
2.2 years ago by Shraddha ▴ 90
1
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1
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899
views
Comment: Comment: How to edit domtblout?
2.2 years ago by Shraddha ▴ 90
2
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1
reply
899
views
Answer: Answer: How to edit domtblout?
2.2 years ago by Shraddha ▴ 90
1
vote
0
replies
621
views
Salmon in alignment mode - what do they mean in the documentation, when they say to use transcriptome.fa?
alignment salmon transcriptome
2.2 years ago by Shraddha ▴ 90
0
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0
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2.6k
views
Comment: Comment: How to extract specific lines from a GTF file?
2.3 years ago by Shraddha ▴ 90
0
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0
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2.6k
views
Comment: Comment: How to extract specific lines from a GTF file?
2.3 years ago by Shraddha ▴ 90
0
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2
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2.6k
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Comment: Comment: How to extract specific lines from a GTF file?
2.3 years ago by Shraddha ▴ 90
0
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2
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2.6k
views
Comment: Comment: How to extract specific lines from a GTF file?
2.3 years ago by Shraddha ▴ 90
1
vote
10
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2.6k
views
How to extract specific lines from a GTF file?
command-line grep loop
updated 2.3 years ago by 8.5k • written 2.3 years ago by ▴ 90
0
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0
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650
views
Comment: Comment: Fetching GO terms based on gene IDs using Entrez e-utilities
2.3 years ago by Shraddha ▴ 90
1
vote
2
replies
650
views
Fetching GO terms based on gene IDs using Entrez e-utilities
unix entrez e-utilities
2.3 years ago by Shraddha ▴ 90
0
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0
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788
views
Comment: Comment: Alignment of de novo assembled transcripts to reference transcriptome?
2.4 years ago by Shraddha ▴ 90
0
votes
2
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788
views
Alignment of de novo assembled transcripts to reference transcriptome?
transcriptomes alignment
2.4 years ago by Shraddha ▴ 90
0
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1
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1.6k
views
Comment: Comment: Why does featurecounts give me an output file with only 0s?
2.4 years ago by Shraddha ▴ 90
0
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1
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1.6k
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Comment: Comment: Why does featurecounts give me an output file with only 0s?
2.4 years ago by Shraddha ▴ 90
0
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1
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1.6k
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Comment: Comment: Why does featurecounts give me an output file with only 0s?
2.4 years ago by Shraddha ▴ 90
0
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1
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1.6k
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Comment: Comment: Why does featurecounts give me an output file with only 0s?
2.4 years ago by Shraddha ▴ 90
3
votes
9
replies
1.6k
views
Why does featurecounts give me an output file with only 0s?
featurecounts
updated 2.4 years ago by 21k • written 2.4 years ago by ▴ 90
1
vote
1
reply
695
views
Getting samples.txt to use in the salmon to DESeq2 pipeline
salmon deseq2
updated 2.4 years ago by 21k • written 2.4 years ago by ▴ 90
0
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1
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1.0k
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Comment: Comment: Extracting GeneID from Dbxref section in GFF file while using featureCounts
2.5 years ago by Shraddha ▴ 90
1
vote
3
replies
1.0k
views
Extracting GeneID from Dbxref section in GFF file while using featureCounts
featurecounts gff
updated 2.5 years ago by ★ 3.7k • written 2.5 years ago by ▴ 90
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