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Comment: Different number of fragments after doublets removal in each run
by
Bioinformatics_16
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Thank You for your response.
Comment: Different number of fragments after doublets removal in each run
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Bioinformatics_16
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###AddDoubleScores
doubScores <- addDoubletScores(
input = ArrowFiles,
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My guess is that chromStarts plus blockSize is equivalent to exonStarts/exonEnds. If you need the bin column, you'll have to script things;…
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For anyone interested, this is the first paper to point out that RPKM (and, by extension, FPKM) normalization is inconsistent across sample…
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From `Resources Tab` --> `Application Note` found at --> https://www.qiagen.com/us/products/next-generation-sequencing/metagenomics/targete…
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I can not answer your TCGAbiolinks question, but I can answer your GDC CNV data question.
There are two types of segment
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Comment: QIAseq 16S/ITS Screening Panel Primers?
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Hello! Any luck figuring this out? I am now facing the same situation.
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This post looks like it was generated using an LLM such as ChatGPT. If that is the case, please mention it in the comment. LLM generated co…
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AIMAR
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Yes the genomic position like for the first line are not the same.
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Looks like that file is available from Nature: https://static-content.springer.com/esm/art%3A10.1038%2Fs41586-020-2308-7/MediaObjects/41586…
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[SVbyEye](https://github.com/daewoooo/SVbyEye) says it handles duplications and inversions.
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Inside the loeuf.pm there is a link for the LOEUF scores that can be downloaded from https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7334197/b…
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Maybe try samplot:
https://github.com/ryanlayer/samplot
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More on MSTRG identifiers -- https://www.biostars.org/p/282817/#282832
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> I understand I need and exon-level count data
Then you should use
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