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Job: Research scientist in bioinformatics, Sweden
postdoc data-analysis cancer
updated 5 hours ago by 39k • written 3.3 years ago by ▴ 10
2
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4
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1.3k
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How to check for the presence/absence of unique rows in two different matrices?
R RStudio matrix
updated 5 hours ago by 39k • written 3.3 years ago by ▴ 110
1
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0
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1.2k
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Job: Position in Microbial Bioinformatics for COVID-19 Research and Response
programming rna ngs genomics
updated 1 hour ago by 39k • written 3.2 years ago by ▴ 10
4
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0
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1.2k
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News: ONLINE course - Metagenomics, metatranscriptomics, and multi'omics for microbial community studies
next-gen-sequencing
updated 1 hour ago by 39k • written 3.2 years ago by ★ 2.3k
2
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0
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1.2k
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Job: Senior Postdoc/Bioinformatician Research Fellow @ UEA, Norwich, UK - NEW DEADLINE
postdoc cancer
updated 4 hours ago by 39k • written 3.3 years ago by ▴ 120
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0
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1.2k
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Job: Permanent researcher position in MetaGenomics
metagenomics researcher
updated 3 hours ago by 39k • written 3.3 years ago by • 0
6
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15
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1.2k
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Forum: PhD Bioinformatics on GWAS
SNP GWAS genome PHD
updated 6 hours ago by 39k • written 3.4 years ago by ▴ 50
0
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0
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1.2k
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Job: Director of Bioinformatics
R genome RNA-Seq sequence
updated 1 hour ago by 39k • written 3.2 years ago by • 0
0
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0
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1.2k
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Job: Bioinformatics Research Position at the Princess Margaret Cancer Centre
Cancer-Biology Imaging
updated 3 hours ago by 39k • written 3.2 years ago by • 0
0
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0
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1.2k
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Job: Open computational biology postdoc position in Dessimoz Lab, Lausanne, Switzerland
postdoc
updated 1 hour ago by 39k • written 2.9 years ago by ▴ 740
1
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0
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1.1k
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News: Population Genomics course online
R SNP next-gen
updated 1 hour ago by 39k • written 3.2 years ago by ★ 2.3k
0
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1
reply
1.1k
views
Job: Computation Biologist (Assay Development)
genome sequencing
updated 4 hours ago by 39k • written 3.3 years ago by • 0
1
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0
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1.1k
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News: Advanced Sequencing Technologies & Bioinformatics Analysis Course at CSHL: November 3 - 15, 2020
course sequencing workshop
updated 7 hours ago by 39k • written 3.4 years ago by 20k
0
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0
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1.1k
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Job: Computational postdoc in NGS data analysis at CIBIO, Trento (Italy)
next-gen-sequencing genome SNP
updated 6 hours ago by 39k • written 3.4 years ago by ▴ 10
0
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0
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1.1k
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Job: Postdoctoral Fellow - Bioinformatician with experience in biological data analysis
Bioinformatician Biology
updated 6 hours ago by 39k • written 3.4 years ago by ▴ 30
0
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0
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1.1k
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Job: Bioinformatics Analyst I-II - Fred Hutchinson Cancer Research Center (Seattle, WA)
WASHINGTON-STATE SEATTLE
updated 3 hours ago by 39k • written 3.3 years ago by ▴ 10
0
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0
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1.1k
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Job: HIRING: Program Manager, Computational Genomics Platform - UCSC Genomics Institute
project-manager program-manager genomics
updated 4 hours ago by 39k • written 3.3 years ago by ▴ 30
1
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0
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1.1k
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Job: Postdoc/research scientist in bioinformatics, Lund, Sweden
variation-interpretation machine-learning
updated 6 hours ago by 39k • written 3.3 years ago by ▴ 10
2
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0
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1.1k
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News: Introduction to genome-wide association studies (GWAS)
Unix GWAS R
updated 7 hours ago by 39k • written 3.4 years ago by ★ 2.3k
0
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0
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1.1k
views
Job: Bioinformatics Data Scientist Opportunity
next-gen-sequencing machine-learning third-gen-sequencing
updated 1 hour ago by 39k • written 3.2 years ago by • 0
7
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4
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1.1k
views
Forum: Studying for a Bioinformatics degree
sequence R next-gen gene RNA-Seq
updated 7 hours ago by 39k • written 3.4 years ago by ▴ 20
1
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0
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1.1k
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Job: (Associate) Staff Scientist, Bioinformatics
Genomics
updated 5 hours ago by 39k • written 3.3 years ago by ▴ 10
1
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0
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1.1k
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Job: PhD student in Computer Science and Bioinformatics (R1)
HPC
updated 4 hours ago by 39k • written 3.3 years ago by ▴ 20
0
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0
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1.1k
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Job: PAFTOL Bioinformatics Developer, Royal Botanic Gardens Kew. London, UK
botany phylogeny ngs
updated 7 hours ago by 39k • written 3.4 years ago by • 0
1
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0
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1.1k
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Job: PhD studentship in CRISPR bioinformatics and cancer genomics
next-gen-sequencing LncRNA CRISPR Cancer
updated 3 hours ago by 39k • written 3.2 years ago by ▴ 20
0
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0
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1.1k
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Job: Genomic Data Analysis - Bioinformatician
Data-Analysis Bioinformatician Biology
updated 6 hours ago by 39k • written 3.4 years ago by ▴ 30
0
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0
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1.1k
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Job: Job: Analytical Bioinformaticist in Genetics
bioinformaticist
updated 4 hours ago by 39k • written 3.3 years ago by • 0
3
votes
2
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1.1k
views
Binding matrix created by DiffBind
DiffBind atac-seq dba
updated 5 hours ago by 39k • written 24 months ago by ▴ 10
10
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6
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1.1k
views
6 follow
Forum: Pros and cons to do biomedical research in pharmaceutical company
industry career academia
updated 4 hours ago by 39k • written 3.3 years ago by ★ 9.3k
0
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0
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1.0k
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Job: Postdoctoral Scientist in Computational Immunology
assembly
updated 5 hours ago by 39k • written 3.3 years ago by • 0
0
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0
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1.0k
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Job: Remote Molecular Biologist / Bioinformatician
molecular-biologist bioinformatician
updated 1 hour ago by 39k • written 2.7 years ago by • 0
0
votes
0
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1.0k
views
Job: Computational Biologist for RNA Diagnostics
R RNA-Seq
updated 4 hours ago by 39k • written 3.3 years ago by • 0
1
vote
0
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1.0k
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Job: Seeking computational oncologists, biologists and bioinformaticians for sofware research study
design research
updated 7 hours ago by 39k • written 3.4 years ago by ▴ 30
0
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0
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1.0k
views
Job: Assistant/Associate Professor, Data Sciences - Clinical Trials
sequencing
updated 4 hours ago by 39k • written 3.3 years ago by • 0
0
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0
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1.0k
views
Job: HIRING: Director, Computational Genomics Platform at UC Santa Cruz Genomics Institute!
director computational-genomics
updated 3 hours ago by 39k • written 3.3 years ago by ▴ 30
0
votes
0
replies
1.0k
views
Job: Applications invited for Microbiome specialist
microbiome
updated 5 hours ago by 39k • written 3.3 years ago by • 0
1
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0
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1.0k
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Job: Bioconductor and the Channing Division of Network Medicine at Harvard Medical School have created a new project management/software developer/manager…
bioconductor
updated 4 hours ago by 39k • written 2.7 years ago by 26k
0
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0
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1.0k
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Job: Bioinformatician-Cancer Biology - Fred Hutchinson Cancer Research Center (Seattle, WA)
SEATTLE COMPUTATIONAL-BIOLOGY
updated 3 hours ago by 39k • written 3.3 years ago by ▴ 10
0
votes
0
replies
1000
views
Job: (Associate) Staff Scientist, Bioinformatics
staff-scientist
updated 1 hour ago by 39k • written 3.2 years ago by ▴ 10
1
vote
2
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997
views
What is the minimum percentage of identity (blastp) to predict the orthologous genes in different species?
Assembly gene genome alignment
updated 4 hours ago by 39k • written 2.7 years ago by ▴ 100
0
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0
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997
views
Job: Bioinformatics Programmer/Specialist - SILENT GENOMES PROJECT
Software-Developer
updated 3 hours ago by 39k • written 3.3 years ago by ▴ 10
1
vote
3
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991
views
ATACseq batch effect coupled with biological effect
batch-effect ATAC-seq
updated 5 hours ago by 39k • written 2.1 years ago by ▴ 60
6
votes
4
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971
views
How does long reads help in the repeated regions of the genome
Illumina short-reads long-reads ONT
updated 4 hours ago by 39k • written 2.7 years ago by ▴ 20
1
vote
0
replies
968
views
Job: Bioinformatics Engineer position at Institut Curie
R RNA-Seq sequencing
updated 7 hours ago by 39k • written 3.4 years ago by ▴ 190
0
votes
5
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955
views
bigwigs to reads in peaks
R atac-seq
updated 5 hours ago by 39k • written 2.4 years ago by ▴ 60
0
votes
0
replies
951
views
Job: Bioinformatics at Oregon State
Semantic gene ontoloygy biomedical
updated 7 hours ago by 39k • written 3.4 years ago by ▴ 90
0
votes
2
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949
views
error while executing panX script (KeyError: 'db_xref').
linux python genome biopython
updated 4 hours ago by 39k • written 2.8 years ago by ▴ 100
0
votes
2
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946
views
How exactly does diffBind count reads?
atac-seq diffbind
updated 5 hours ago by 39k • written 2.2 years ago by ▴ 10
0
votes
1
reply
934
views
ATAC seq enhancer help
alignment ATAC-seq bowtie2 DNA Enhancers
updated 5 hours ago by 39k • written 3.7 years ago by • 0
1
vote
3
replies
933
views
News: 4th Berlin Summer School in NGS Data Analysis - October 5-9, 2020
NGS RNA-Seq DNA-Seq
updated 4 hours ago by 39k • written 3.3 years ago by 9.9k
274 results • Page 2 of 6
Recent Votes
Converting Genome Coordinates From One Genome Version To Another (Ucsc Liftover, Ncbi Remap, Ensembl Api)
Converting Genome Coordinates From One Genome Version To Another (Ucsc Liftover, Ncbi Remap, Ensembl Api)
A: Mouse promoter regions
Answer: How to get information about promoter from bulk-RNAseq?
A: Extracting Flanking Regions across TSS using R scripts
A: Mouse promoter regions
A: Finding zebrafish promoters ENSEMBL
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Recent Replies
Comment: How to get information about promoter from bulk-RNAseq? by camillab. ▴ 130
and what about enhancer? is it possible to do it from a bulk-RNAseq?
Comment: How to get information about promoter from bulk-RNAseq? by camillab. ▴ 130
yes! clearly the terminology on my side needs to improved!
Comment: How to get information about promoter from bulk-RNAseq? by rpolicastro 12k
Generally speaking, most promoters only initiate transcription for a single gene, with a single gene potentially having multiple promoters …
Answer: How to get information about promoter from bulk-RNAseq? by Trivas ★ 1.2k
I'd probably select the genes of interest from your bulk RNA-seq results then use the UCSC table browser to get the sequence upstream of th…
Comment: How to add annotation columns with specific colors to the heatmap? by Ram 39k
Show us your exact code - it is quite easy to tweak colors in ComplexHeatmap with the `col=` argument.
Comment: VCF file CSQ flag by Ram 39k
True, but it's not technically impossible to annotate GVCFs, which is why I did not address that point.
Comment: Creating a local version of Clustered NR database by PeterC_NCBI ▴ 260
@genomax Sorry for the delay in reply. We're still working out the details of what exactly to provide. One idea is to provide just the rep…
Comment: Shannon's Entropy by Sliding Window in R by rohitsatyam102 ▴ 690
Hi Were u able to achieve this?
Comment: Differences in GTF files hg19 and hg38 by GenoMax 130k
Since this is not an answer to the original question do not add it as such. I moved your last comment to the correct spot it should have be…
Comment: VCF file CSQ flag by Pierre Lindenbaum 154k
if your talking about the gvcf produced by HaplotypeCaller with ERC=GVCF, you don't annote g.vcf files , you must first merge the g.vcf.f…
Comment: [python]sklearn.ensemble.RandomForestClassifier(TypeError: string indices must b by Ram 39k
https://www.biostars.org/u/127538/ : Please delete this question or it will be deleted by moderators in a few days.
Comment: VCF file CSQ flag by Ram 39k
A gvcf files has blocks for both variant loci and non-variant loci, so you won't see a CSQ for each record, only for those variant loci wit…
Comment: Differences in GTF files hg19 and hg38 by heureuse • 0
Thank you very much. I get it from UCSC.
Comment: [python]sklearn.ensemble.RandomForestClassifier(TypeError: string indices must b by Arup Ghosh 3.2k
This post does not fit the theme of this forum.
Comment: CellRanger problem by Arup Ghosh 3.2k
Try with atleast 32 GB of Memory rather than 16 GB specified by `limitGenomeGenerateRAM` option.
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