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Comment: Comment: Issue With CRAM -> BAM -> FASTQ Conversion
3.0 years ago by User000 ▴ 710
0
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2
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1.8k
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Comment: Comment: Should we keep only the uniquely mapped reads for gene expression
3.0 years ago by User000 ▴ 710
0
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1
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1.8k
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Comment: Comment: Should we keep only the uniquely mapped reads for gene expression
3.0 years ago by User000 ▴ 710
4
votes
7
replies
1.8k
views
Should we keep only the uniquely mapped reads for gene expression
RNA-seq
updated 3.0 years ago by ★ 17k • written 3.0 years ago by ▴ 710
2
votes
7
replies
1.1k
views
Count the numfer of reads supporting a pattern from a BAM file
samtools
updated 3.0 years ago by ★ 1.2k • written 3.0 years ago by ▴ 710
0
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0
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1.1k
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Comment: Comment: Count the numfer of reads supporting a pattern from a BAM file
3.0 years ago by User000 ▴ 710
0
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0
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1.1k
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Comment: Comment: Count the numfer of reads supporting a pattern from a BAM file
3.0 years ago by User000 ▴ 710
0
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2
replies
1.1k
views
Comment: Comment: Count the numfer of reads supporting a pattern from a BAM file
3.0 years ago by User000 ▴ 710
0
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0
replies
2.9k
views
Comment: Comment: Extract reads overlapping a specific region in bam file
3.1 years ago by User000 ▴ 710
0
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2
replies
2.9k
views
Comment: Comment: Extract reads overlapping a specific region in bam file
3.1 years ago by User000 ▴ 710
0
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1
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7.3k
views
Comment: Comment: Isolating reads from specific region from bam file
updated 3.1 years ago by 88k • written 3.1 years ago by ▴ 710
0
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0
replies
2.9k
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Comment: Comment: Extract reads overlapping a specific region in bam file
3.1 years ago by User000 ▴ 710
8
votes
9
replies
2.9k
views
Extract reads overlapping a specific region in bam file
awk samtools
updated 2.1 years ago by ▴ 10 • written 3.1 years ago by ▴ 710
0
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1
reply
7.3k
views
Comment: Comment: Isolating reads from specific region from bam file
3.1 years ago by User000 ▴ 710
0
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2
replies
7.3k
views
Comment: Comment: Isolating reads from specific region from bam file
3.1 years ago by User000 ▴ 710
0
votes
0
replies
541
views
Correlation test based on position sliding window for multiple variables
statistics R corr.test
3.2 years ago by User000 ▴ 710
0
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1
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3.4k
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Comment: Comment: DNA sequence complexity with a sliding window
3.2 years ago by User000 ▴ 710
0
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1
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3.4k
views
Comment: Comment: DNA sequence complexity with a sliding window
3.2 years ago by User000 ▴ 710
0
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1
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3.4k
views
Comment: Comment: DNA sequence complexity with a sliding window
3.2 years ago by User000 ▴ 710
0
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0
replies
3.4k
views
Comment: Comment: DNA sequence complexity with a sliding window
3.2 years ago by User000 ▴ 710
0
votes
2
replies
3.4k
views
Comment: Comment: DNA sequence complexity with a sliding window
3.2 years ago by User000 ▴ 710
0
votes
1
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3.4k
views
Comment: Comment: DNA sequence complexity with a sliding window
3.2 years ago by User000 ▴ 710
0
votes
1
reply
3.4k
views
Comment: Comment: DNA sequence complexity with a sliding window
3.2 years ago by User000 ▴ 710
0
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1
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3.4k
views
Comment: Comment: DNA sequence complexity with a sliding window
3.2 years ago by User000 ▴ 710
0
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0
replies
3.4k
views
Comment: C: DNA sequence complexity with a sliding window
3.3 years ago by User000 ▴ 710
7
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19
replies
3.4k
views
DNA sequence complexity with a sliding window
R python dna
updated 3.2 years ago by 143k • written 3.3 years ago by ▴ 710
0
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1
reply
6.6k
views
Comment: C: Split multiallelic SNPs to biallelic from vcf
3.3 years ago by User000 ▴ 710
0
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0
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6.6k
views
Comment: C: Split multiallelic SNPs to biallelic from vcf
3.3 years ago by User000 ▴ 710
0
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1
reply
6.0k
views
Comment: C: Convert multi-allele to bi-allele
3.3 years ago by User000 ▴ 710
0
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1
reply
6.0k
views
Comment: C: Convert multi-allele to bi-allele
3.3 years ago by User000 ▴ 710
0
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0
replies
1.0k
views
Comment: C: BCFTools query regex or boolean expression
3.3 years ago by User000 ▴ 710
0
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1
reply
1.0k
views
Comment: C: BCFTools query regex or boolean expression
3.3 years ago by User000 ▴ 710
1
vote
5
replies
1.0k
views
BCFTools query regex or boolean expression
bcftools
3.3 years ago by User000 ▴ 710
5
votes
5
replies
3.9k
views
Running BLAST on huge files
alignment blast
updated 2.3 years ago by 44k • written 9.5 years ago by ▴ 710
0
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0
replies
1.6k
views
Comment: C: Platypus variant caller error
3.5 years ago by User000 ▴ 710
0
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1
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1.6k
views
Comment: C: Platypus variant caller error
3.5 years ago by User000 ▴ 710
0
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0
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1.6k
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Comment: C: Platypus variant caller error
3.5 years ago by User000 ▴ 710
2
votes
6
replies
1.6k
views
Platypus variant caller error
SNP variant calling
3.5 years ago by User000 ▴ 710
0
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0
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2.1k
views
Comment: C: Platypus variantcaller.c:16971 errpr
3.5 years ago by User000 ▴ 710
0
votes
0
replies
2.9k
views
Comment: C: VCF parse error: Could not add dummy header for contig
3.5 years ago by User000 ▴ 710
0
votes
1
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2.9k
views
Comment: C: VCF parse error: Could not add dummy header for contig
3.5 years ago by User000 ▴ 710
1
vote
6
replies
2.9k
views
VCF parse error: Could not add dummy header for contig
vcf freebayes
3.5 years ago by User000 ▴ 710
1
vote
1
reply
2.9k
views
Comment: C: VCF parse error: Could not add dummy header for contig
3.5 years ago by User000 ▴ 710
0
votes
0
replies
640
views
Platypus variant calling outputs VCFv4.0 with no contig ID
vcf
3.5 years ago by User000 ▴ 710
0
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1
reply
1.9k
views
Answer: A: Interval list as a wildcard in snakemake
3.6 years ago by User000 ▴ 710
0
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0
replies
1.9k
views
Comment: C: Interval list as a wildcard in snakemake
3.6 years ago by User000 ▴ 710
0
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1
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1.9k
views
Comment: C: Interval list as a wildcard in snakemake
3.6 years ago by User000 ▴ 710
2
votes
7
replies
1.9k
views
Interval list as a wildcard in snakemake
snakemake wildcards
3.6 years ago by User000 ▴ 710
0
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1
reply
1.9k
views
Comment: C: Interval list as a wildcard in snakemake
3.6 years ago by User000 ▴ 710
4
votes
4
replies
2.3k
views
Variant calling from FASTA file
bwa bowtie fasta vcf
3.6 years ago by User000 ▴ 710
393 results • Page 2 of 8
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