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Martijn Van Iersel • 550
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Recent Replies
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C: plink --assoc command gives "NA" for all the analysis (F_A,F_U,A2,CHISQ,P,OR val by
kushagraprasad24 • 0
Command i ran :- plink --file input --assoc --out result
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C: plink --assoc command gives "NA" for all the analysis (F_A,F_U,A2,CHISQ,P,OR val by
kushagraprasad24 • 0
This is the .map data:- 1 BS00033749_51 -9 13 1 BS00100774_51 -9 13 1 BobWhite_c1...
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C: plink --assoc command gives "NA" for all the analysis (F_A,F_U,A2,CHISQ,P,OR val by
kushagraprasad24 • 0
This is the .ped data:- -9 450975 -9 -9 -9 2 A A C C G G C C A A G G T T A A C C C C A A ...
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A: How to distinguish if a gene is a paralogue or an isoform? by
kashifalikhan007 • 50
According to the basic definition isoforms are coming from same gene, so their location should be...
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C: What tool can be used to predct regulatory element within an input sequence ? by
lin.pei26 • 60
Thank you jrj.healey ! I will have a check!
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C: How to create multiple density plots in one by
a.b.federico • 0
Terrific answer. The reshape2 package is the key. Thank you!
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C: Minimap2 generated a very large paf, and miniasm failed to get gfa, how to do wi by
lovenlong • 10
It works, thank you.
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C: How to distinguish if a gene is a paralogue or an isoform? by
Vitis • 1.9k
Not a typical bioinformatics question, but I'll give it a try. Probably both are true. This gene ...
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C: Samtools: Question about filtering BAM file using flag by
SDin • 0
I got it. Many thanks for your kind help!
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C: Removing duplicated mutations from a txt by
Friederike ♦ 2.5k
then: 1. read in the original file into R 2. use `unique(df)` 3. use that `dndscv` function and...
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C: How to get short and sweet gene names/description for gene IDs? by
BIOAWY • 110
Thank a heaps finswimmer :)
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A: How to plot the output of bedtools genomecov as a histogram using gnuplot? by
adynata • 0
if that data is in a file you could do plot'FILE' u (($3+$4)/2.):5:($4-$3) w boxes the location...
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