Showing: bedopsreset
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8
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196
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How extract the longest overlap?
bedtools deeptools bedops intersect overlap written 17 days ago by star130 • updated 14 days ago by Biostar ♦♦ 20
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3
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3
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4
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223
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BEDOPS bedmap tool usage
bedops sequence bedmap dna written 3 months ago by Uday Rangaswamy100 • updated 3 months ago by Alex Reynolds27k
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197
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BEDOPS installation on MAC
assembly bedops written 3 months ago by MK200030 • updated 3 months ago by Alex Reynolds27k
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5
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217
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5 follow
5
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Pulling out interval adjoining regions
bedtools bed bedops interval written 3 months ago by rbronste230 • updated 3 months ago by Alex Reynolds27k
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167
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0
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0
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1
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183
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1
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Read depth interval comparison
read depth bed bedops bam bedtools written 4 months ago by rbronste230 • updated 4 months ago by Pierre Lindenbaum118k
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2
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200
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2
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Extending BED intervals
bedtools bed bedops interval written 4 months ago by rbronste230 • updated 4 months ago by Alex Reynolds27k
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171
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1
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4
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2
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2.0k
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2
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2
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1
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325
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1
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Merge intervals between but NOT within 2 BED files
bedtools overlap merge bedops written 6 months ago by Anand Rao210 • updated 6 months ago by Alex Reynolds27k
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2
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306
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2
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0
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0
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715
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Average PhastCon score using bedops
software error bedops starch written 2.4 years ago by Shaway10 • updated 10 months ago by Biostar ♦♦ 20
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2
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439
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7 follow
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1
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652
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Stats on the overlapping length within two bed files
bedtools genome bedops written 12 months ago by beanavarro850 • updated 12 months ago by Alex Reynolds27k
2
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1
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313
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1
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Bedops --element-of misses elements
bedops --element-of written 13 months ago by rs40 • updated 13 months ago by Alex Reynolds27k
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391
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1
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0
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0
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385
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0
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3
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1
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706
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1
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FIMO output to bed
bedtools fimo meme bedops written 14 months ago by rbronste230 • updated 14 months ago by YaGalbi1.4k
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522
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bedops gff2bed error
bedops gff2bed written 14 months ago by varsha61970 • updated 14 months ago by Alex Reynolds27k
4
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1
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374
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1
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bedops -u does not work properly
bed bedops intersect written 14 months ago by Ming Tang2.4k • updated 14 months ago by Alex Reynolds27k
0
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2
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468
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2
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VCF to BED conversion error in BEDOPS
vcf bed bedops written 15 months ago by Shab86240 • updated 15 months ago by Alex Reynolds27k
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1
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886
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1
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bedops vcf2bed core dump
bedops vcf2bed written 16 months ago by RamRS20k
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2
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603
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2
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Recompile bedops with increased TOKENS_MAX_LENGTH
sort-bed bedops written 16 months ago by RamRS20k • updated 16 months ago by Alex Reynolds27k
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843
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5 follow
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3
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4
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4.0k
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Intersect multiple bed and keep all fields
bedtools bed bedops written 3.6 years ago by user230613270 • updated 17 months ago by ashmc0
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483
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0
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Merging bed intervals within a group
bedtools bed bedops written 19 months ago by EVR510
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584
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Creating reproducible peak regions from multiple ChIP-seq studies
bedtools bedops written 21 months ago by James Ashmore2.6k • updated 19 months ago by Biostar ♦♦ 20
4
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801
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1
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Closest gene to set of intervals
bedtools bedops written 21 months ago by rbronste230 • updated 21 months ago by Rohit1.3k
6
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1
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1.5k
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1
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Merge bed files, keep the peak count
bedtools bedops chip-seq written 2.8 years ago by rioualen330 • updated 21 months ago by Biostar ♦♦ 20
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