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17
votes
2
answers
1.9k
views
2
answers
Blog: Fast kmer reverse complement code using bit tricks
kmer reverse-complement gatb code blog written 4.8 years ago by Rayan Chikhi • 1.4k • updated 6 months ago by martinsteinegger • 20
1
vote
0
answers
183
views
0
answers
Loading from pdb files using Pymol
gene code written 6 months ago by kingkenshin1997 • 0
283
votes
27
answers
13k
views
30 follow
27
answers
Mean Length Of Fasta Sequences
fasta codegolf sequence code written 9.0 years ago by Eric Normandeau ♦ 10k • updated 9 months ago by Jeremy Leipzig ♦ 18k
105
votes
15
answers
8.4k
views
23 follow
15
answers
Digesting Fasta Sequences Into A Set Of Smaller Sequences
fasta codegolf sequence code written 9.0 years ago by Eric Normandeau ♦ 10k • updated 9 months ago by zx8754 ♦ 7.8k
31
votes
4
answers
6.2k
views
7 follow
4
answers
Finding Orf And Corresponding Strand In A Dna Sequence
codegolf orf code dna written 8.4 years ago by Eric Normandeau ♦ 10k • updated 9 months ago by zx8754 ♦ 7.8k
2
votes
2
answers
1.9k
views
2
answers
Can You Improve This Erlang Code ? (Was "Average Length Of The Sequences In A Fasta File")
fasta sequence functional code written 9.0 years ago by Pierre Lindenbaum ♦ 121k • updated 10 months ago by RamRS ♦ 22k
26
votes
5
answers
13k
views
8 follow
5
answers
Self-Learning Gene-Expression K-Means Clustering In R
R clustering code written 9.1 years ago by Eric Normandeau ♦ 10k • updated 10 months ago by RamRS ♦ 22k
37
votes
8
answers
3.8k
views
13 follow
8
answers
Quick Programming Challenge: How Do I Calculate Reference Coverage From A Table Of Alignment Starts And Ends?
alignment code programming written 9.3 years ago by Jeremy Leipzig ♦ 18k • updated 10 months ago by RamRS ♦ 22k
6
votes
1
answer
646
views
1
answer
CDS sequence from mRNA and protein sequence
fasta cds protein code mrna written 12 months ago by Macspider • 2.8k • updated 12 months ago by lieven.sterck ♦ 5.5k
4
votes
0
answers
433
views
0
answers
data comparison contained in two separate vcf files
python dictionnay code written 14 months ago by nour.hadjz • 0
1
vote
1
answer
483
views
1
answer
Getting GI number from NCBI database through code
ncbi fasta gi code accession number written 14 months ago by erans995 • 0
5
votes
2
answers
1.1k
views
2
answers
Software for visualising GWAS results
software gwas code package written 2.8 years ago by entheologist33 • 70 • updated 17 months ago by shuaichengwang • 0
0
votes
0
answers
360
views
0
answers
Finding wobble/redundant positions in an RNA string using R.
R rna code wobble position" written 17 months ago by fawazfebin • 0
0
votes
0
answers
552
views
0
answers
Combined Forward and Reverse fastaq files from EBI_ENA
next-gen code written 17 months ago by galud1990 • 0 • updated 17 months ago by genomax ♦ 70k
0
votes
1
answer
2.1k
views
1
answer
Alignment to reference containing ambiguity code
iupac ambiguity alignment code mosaik written 4.9 years ago by Karol Pal jr. • 20 • updated 21 months ago by otetelis • 0
6
votes
2
answers
826
views
5 follow
2
answers
R multiple parameters
R parameter code written 2.3 years ago by sacha • 1.8k
1
vote
3
answers
1.2k
views
3
answers
How is the FM-index built for multiple entries of a fasta file?
software sequence code index written 2.3 years ago by yifangt86 • 10
0
votes
0
answers
1.0k
views
0
answers
Estimating genetics distance with python prgram
python distance program code divergence written 2.4 years ago by enrightnm • 0
3
votes
0
answers
670
views
0
answers
Forum: [META] Noticed an issue with code markup and open parentheses (
meta forum code markup written 2.5 years ago by jrj.healey ♦ 13k • updated 2.5 years ago by RamRS ♦ 22k
3
votes
1
answer
990
views
1
answer
TARGET Pediatric Cancer Code Table
code target written 2.7 years ago by komal.rathi • 3.4k
4
votes
2
answers
853
views
2
answers
Where to compute Support Vector Machines?
code support vector machine written 3.0 years ago by spacegeek1212 • 30 • updated 3.0 years ago by aa • 30
127
votes
11
answers
44k
views
54 follow
11
answers
Selecting Random Pairs From Fastq?
illumina fastq sequence random code written 8.4 years ago by Ketil ♦ 3.9k • updated 3.3 years ago by plijnzaad • 30
0
votes
2
answers
1.2k
views
2
answers
Help required in making a script work for NGS data analysis pipeline
ngs code written 3.6 years ago by adnan.haider.ra • 10 • updated 3.6 years ago by Antonio R. Franco • 4.1k
4
votes
0
answers
1.4k
views
0
answers
R code for variable methylation region identification (VMR, vmr)
R variable methylation region code written 3.9 years ago by Shicheng Guo • 7.6k
7
votes
0
answers
1.3k
views
6 follow
0
answers
Forum: reviewing a paper with software/code I cannot run
forum open code open-access review submission written 4.1 years ago by Biomonika (Noolean) ♦ 3.1k
6
votes
1
answer
21k
views
1
answer
Can the code of a R package be changed? How?
R code written 4.1 years ago by Antonio R. Franco • 4.1k
1
vote
3
answers
1.3k
views
3
answers
Compare one of the columns of two seperate files and write the raw of the second file next to first file if match.
next-gen code written 4.2 years ago by emre • 0 • updated 4.2 years ago by iraun • 3.6k
43
votes
7
answers
3.3k
views
20 follow
7
answers
Post Your Prefered Bioinformatics Short Code
code written 9.3 years ago by Eric Normandeau ♦ 10k • updated 4.3 years ago by michael.ante • 3.3k
1
vote
0
answers
1.2k
views
0
answers
Job: COMPUTATIONAL BIOLOGIST, Ph.D
software next-gen job code statistics written 4.3 years ago by danielle • 30 • updated 4.3 years ago by SES ♦ 8.2k
2
votes
1
answer
2.8k
views
1
answer
genoPlotR in R
plotting R sequence genoplotr code written 4.7 years ago by br-barayah • 10 • updated 4.5 years ago by xianghe.yan • 0
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