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<prev • 182 results • page 1 of 7 • next >
14
votes
4
answers
3.2k
views
7 follow
4
answers
A Cytoscape Plugin For Grouping Nodes By 'Compartment' ?
network interaction cytoscape written 7.4 years ago by Lyco • 2.3k • updated 6 days ago by alcotross02 • 0
0
votes
2
answers
609
views
2
answers
add plugin in cytoscape
cytoscape written 3.4 years ago by gbahramali • 20 • updated 11 days ago by Biostar ♦♦ 20
2
votes
1
answer
2.7k
views
1
answer
How to increase cytoscape memory?
cytoscape memory written 4.3 years ago by Omid • 540 • updated 15 days ago by Biostar ♦♦ 20
3
votes
2
answers
89
views
2
answers
Nteworks in Cytoscape, time-series gene-expression
gene gene expression time-series cytoscape written 25 days ago by Malgorzata.Wieteska • 0
0
votes
1
answer
138
views
1
answer
cytoscape subnetwork from WGCNA based modules
tiedie subnetwork cytoscape written 4 weeks ago by archie • 60 • updated 4 weeks ago by RamRS ♦ 18k
0
votes
1
answer
102
views
1
answer
Small pathways but big network files
network cytoscape written 4 weeks ago by boczniak767 • 610 • updated 4 weeks ago by scooter • 50
0
votes
1
answer
286
views
1
answer
Bipartite network analysis using cytoscape
cytoscape bipartite written 3 months ago by The Last Word • 160 • updated 7 weeks ago by xanderpico • 150
2
votes
3
answers
1.7k
views
3
answers
network with cytoscape
cytoscape written 3.0 years ago by gbahramali • 20 • updated 7 weeks ago by andrybz92 • 0
2
votes
1
answer
186
views
1
answer
Applying Steiner minimal tree algorithm in Cytoscape
gene ppi cytoscape written 10 weeks ago by anu014 • 150 • updated 8 weeks ago by gary.bader • 20
1
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0
answers
188
views
0
answers
Cytoscape network view problem: running out of memory
cytoscape aracne written 11 weeks ago by piyushjo • 50
2
votes
1
answer
220
views
1
answer
How to avoid duplicate edges between same node pair in a co-expression network
duplicate edges cytoscape rna-seq coexpression written 3 months ago by aishu.jp • 10 • updated 3 months ago by Kevin Blighe ♦ 30k
0
votes
0
answers
206
views
0
answers
Scale-free networks are rare
cytoscape written 3 months ago by The Last Word • 160
1
vote
0
answers
201
views
0
answers
What if a network is not scale-free?
network cytoscape rna-seq written 3 months ago by ag1805x • 90
6
votes
1
answer
218
views
1
answer
How to manage self loops in gene coexpression network constructed from RNA-seq data
gene R cytoscape rna-seq written 4 months ago by aishu.jp • 10 • updated 4 months ago by zx8754 ♦ 5.3k
3
votes
1
answer
214
views
1
answer
Cytoscape's plugin 'stringApp' error
software error gene cytoscape written 4 months ago by anu014 • 150 • updated 4 months ago by xanderpico • 150
0
votes
0
answers
198
views
0
answers
Checking the degree Distribution of a network after clustering
degree distribution cytoscape written 6 months ago by The Last Word • 160 • updated 4 months ago by Biostar ♦♦ 20
4
votes
1
answer
2.5k
views
1
answer
How To Visualize Network Comparatively Via Cytoscape Or Other Tools
network cytoscape written 5.9 years ago by maddy • 20 • updated 4 months ago by kuntal.bhusan • 0
4
votes
1
answer
230
views
1
answer
Create a network file to specie without PPI information
network ppi cytoscape written 4 months ago by aboutmb • 0 • updated 4 months ago by Leite • 300
2
votes
1
answer
342
views
1
answer
Cytoscape: select edges that are the interactions between two networks
interaction network cytoscape written 4 months ago by Xiaokang ZH • 40 • updated 4 months ago by xanderpico • 150
0
votes
1
answer
188
views
1
answer
Cytoscape color code according to own annotations
enrichment network string cytoscape written 5 months ago by frida.danielsson • 30 • updated 5 months ago by Jean-Karim Heriche ♦ 16k
1
vote
0
answers
307
views
0
answers
Identifying Protein protein interactions from co-IP/ mass spec spectrum counts
mass spectrometry ppi spectrum counts cytoscape written 5 months ago by indira.krishnan • 0
1
vote
1
answer
325
views
1
answer
Multiple networks integrated into one figure in Cytoscape
network cytoscape written 7 months ago by Xiaokang ZH • 40 • updated 6 months ago by xanderpico • 150
2
votes
1
answer
532
views
1
answer
Cytoscape : how to color same nodes with several colors ?
cytoscape written 6 months ago by ZheFrench • 140 • updated 6 months ago by scooter • 50
3
votes
1
answer
1.9k
views
1
answer
Construct a Gene Ontology Network
gene ontology cytoscape written 3.8 years ago by s.kheitan • 30 • updated 6 months ago by Biostar ♦♦ 20
22
votes
3
answers
17k
views
3
answers
Coloring Multiple Nodes In Cytoscape
network visualization cytoscape written 7.7 years ago by pixie@bioinfo • 1.3k • updated 6 months ago by Biostar ♦♦ 20
1
vote
1
answer
307
views
1
answer
Ideas for more analysis
cytoscape gene network written 7 months ago by The Last Word • 160 • updated 7 months ago by xanderpico • 150
8
votes
2
answers
764
views
5 follow
2
answers
How to color nodes in Cytoscape according to expression of genes? How should the input file look like?
software degs cytoscape rna-seq expression written 8 months ago by orzech_mag • 180 • updated 8 months ago by a.zielezinski ♦ 8.4k
1
vote
1
answer
799
views
1
answer
How to import both node and edge files into cytoscape from WGCNA?
wgcna node file cytoscape edge file written 9 months ago by niutster • 80 • updated 9 months ago by Kevin Blighe ♦ 30k
4
votes
1
answer
537
views
1
answer
Cytoscape network of upregulate and downregulate transcription factors: how to draw?
network cytoscape transcription factors rna-seq written 10 months ago by Farbod • 3.2k • updated 10 months ago by Leite • 300
3
votes
1
answer
1.9k
views
1
answer
Identifying interactors of hub genes using Cytoscape Network Analyzer plugin
networkanalyzer cytoscape biological process written 2.5 years ago by ishengomae • 90 • updated 10 months ago by Biostar ♦♦ 20
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