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<prev • 183 results • page 1 of 7 • next >
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Network Analyzer in Cytoscape
cytoscape written 1 day ago by The Last Word • 160 • updated 1 day ago by Jean-Karim Heriche ♦ 16k
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3.2k
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7 follow
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A Cytoscape Plugin For Grouping Nodes By 'Compartment' ?
network interaction cytoscape written 7.4 years ago by Lyco • 2.3k • updated 8 days ago by alcotross02 • 0
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2
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611
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2
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add plugin in cytoscape
cytoscape written 3.4 years ago by gbahramali • 20 • updated 13 days ago by Biostar ♦♦ 20
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How to increase cytoscape memory?
cytoscape memory written 4.4 years ago by Omid • 540 • updated 17 days ago by Biostar ♦♦ 20
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2
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Nteworks in Cytoscape, time-series gene-expression
gene gene expression time-series cytoscape written 27 days ago by Malgorzata.Wieteska • 0
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140
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cytoscape subnetwork from WGCNA based modules
tiedie subnetwork cytoscape written 4 weeks ago by archie • 60 • updated 4 weeks ago by RamRS ♦ 18k
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102
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Small pathways but big network files
network cytoscape written 5 weeks ago by boczniak767 • 610 • updated 4 weeks ago by scooter • 50
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291
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1
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Bipartite network analysis using cytoscape
cytoscape bipartite written 3 months ago by The Last Word • 160 • updated 7 weeks ago by xanderpico • 150
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3
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1.7k
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3
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network with cytoscape
cytoscape written 3.0 years ago by gbahramali • 20 • updated 7 weeks ago by andrybz92 • 0
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188
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Applying Steiner minimal tree algorithm in Cytoscape
gene ppi cytoscape written 10 weeks ago by anu014 • 150 • updated 8 weeks ago by gary.bader • 20
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194
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Cytoscape network view problem: running out of memory
cytoscape aracne written 11 weeks ago by piyushjo • 50
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1
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223
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1
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How to avoid duplicate edges between same node pair in a co-expression network
duplicate edges cytoscape rna-seq coexpression written 3 months ago by aishu.jp • 10 • updated 3 months ago by Kevin Blighe ♦ 30k
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211
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Scale-free networks are rare
cytoscape written 3 months ago by The Last Word • 160
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206
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What if a network is not scale-free?
network cytoscape rna-seq written 3 months ago by ag1805x • 90
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How to manage self loops in gene coexpression network constructed from RNA-seq data
gene R cytoscape rna-seq written 4 months ago by aishu.jp • 10 • updated 4 months ago by zx8754 ♦ 5.3k
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1
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215
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1
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Cytoscape's plugin 'stringApp' error
software error gene cytoscape written 4 months ago by anu014 • 150 • updated 4 months ago by xanderpico • 150
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199
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Checking the degree Distribution of a network after clustering
degree distribution cytoscape written 6 months ago by The Last Word • 160 • updated 4 months ago by Biostar ♦♦ 20
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How To Visualize Network Comparatively Via Cytoscape Or Other Tools
network cytoscape written 5.9 years ago by maddy • 20 • updated 4 months ago by kuntal.bhusan • 0
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1
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231
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Create a network file to specie without PPI information
network ppi cytoscape written 4 months ago by aboutmb • 0 • updated 4 months ago by Leite • 300
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1
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346
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1
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Cytoscape: select edges that are the interactions between two networks
interaction network cytoscape written 4 months ago by Xiaokang ZH • 40 • updated 4 months ago by xanderpico • 150
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191
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Cytoscape color code according to own annotations
enrichment network string cytoscape written 5 months ago by frida.danielsson • 30 • updated 5 months ago by Jean-Karim Heriche ♦ 16k
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Identifying Protein protein interactions from co-IP/ mass spec spectrum counts
mass spectrometry ppi spectrum counts cytoscape written 5 months ago by indira.krishnan • 0
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1
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328
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1
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Multiple networks integrated into one figure in Cytoscape
network cytoscape written 7 months ago by Xiaokang ZH • 40 • updated 6 months ago by xanderpico • 150
2
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1
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539
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1
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Cytoscape : how to color same nodes with several colors ?
cytoscape written 6 months ago by ZheFrench • 140 • updated 6 months ago by scooter • 50
3
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1
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1.9k
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1
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Construct a Gene Ontology Network
gene ontology cytoscape written 3.8 years ago by s.kheitan • 30 • updated 6 months ago by Biostar ♦♦ 20
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3
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17k
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3
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Coloring Multiple Nodes In Cytoscape
network visualization cytoscape written 7.7 years ago by pixie@bioinfo • 1.3k • updated 6 months ago by Biostar ♦♦ 20
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309
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Ideas for more analysis
cytoscape gene network written 7 months ago by The Last Word • 160 • updated 7 months ago by xanderpico • 150
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2
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773
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5 follow
2
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How to color nodes in Cytoscape according to expression of genes? How should the input file look like?
software degs cytoscape rna-seq expression written 8 months ago by orzech_mag • 180 • updated 8 months ago by a.zielezinski ♦ 8.4k
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How to import both node and edge files into cytoscape from WGCNA?
wgcna node file cytoscape edge file written 9 months ago by niutster • 80 • updated 9 months ago by Kevin Blighe ♦ 30k
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Cytoscape network of upregulate and downregulate transcription factors: how to draw?
network cytoscape transcription factors rna-seq written 10 months ago by Farbod • 3.2k • updated 10 months ago by Leite • 300
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