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6
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Big difference in estimated duplicate reads between forward and reverse of paired-end RNA-seq
duplication rna-seq fastqc written 4 months ago by Eric Lim • 1.6k • updated 11 weeks ago by Biostar ♦♦ 20
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189
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Deduplication using UMItools
duplication picard umitools bam rna-seq written 3 months ago by Ati • 30 • updated 3 months ago by Devon Ryan ♦ 94k
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114
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Mapping to duplicated region
mismapping heteroplasmy mitogenome snp duplication written 3 months ago by eadele • 0
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Tracing evolution of duplicated genes
gene evolution duplication written 4.0 years ago by mjoyraj • 50 • updated 5 months ago by Biostar ♦♦ 20
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201
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RNASeq: Normalization of sample with allele specific duplication
duplication rna-seq normalisation allele specific written 5 months ago by Ankit • 130 • updated 5 months ago by h.mon ♦ 29k
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5 follow
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Sequence duplication levels in de-novo assemblies
de-novo fastqc duplication written 6 months ago by yp19 • 50 • updated 6 months ago by predeus • 1.3k
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301
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Number of Tandem and Interspersed duplications
sv cnv duplication written 7 months ago by German.M.Demidov • 1.5k • updated 7 months ago by d-cameron • 2.1k
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195
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Detection of duplicated regions in RNA-seq data
rna-seq duplication written 8 months ago by Ankit • 130 • updated 7 months ago by Biostar ♦♦ 20
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RNASeq analysis, FastQC how to solve warning and fail
rnaseq fastq fastqc ngs duplication written 12 months ago by Kian • 40
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high duplication levels in R1 reads of 10x Genomics samples
10x duplication rna-seq fastqc written 13 months ago by Assa Yeroslaviz • 1.3k • updated 13 months ago by i.sudbery ♦ 7.3k
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How to visualize duplicated segments in a de novo Whole Genome Assembly
wgs visualization duplication written 16 months ago by gbdias • 80
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RNA-seq: Should remove duplicates in all samples of same experiment although some do not have technical duplicates?
dupradar rna-seq duplication written 21 months ago by salamandra • 280 • updated 20 months ago by h.mon ♦ 29k
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524
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Why can a conserved gene be two times in my assembly?
gene assembly duplication conserved sequencing written 2.2 years ago by Kartoffel • 0 • updated 2.2 years ago by Devon Ryan ♦ 94k
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Could high duplication be from ribosomal RNA in RNA-seq samples?
rrna sequencing rna-seq duplication written 3.7 years ago by mmrcksn • 50 • updated 2.2 years ago by Biostar ♦♦ 20
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Gene duplications in Transcriptome
genome trinity duplication transcriptome written 2.7 years ago by Edphid • 0
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calling deletions and duplications in the cancer genomes
genome deletion duplication written 3.2 years ago by Bogdan • 1000 • updated 3.2 years ago by WouterDeCoster ♦ 43k
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680
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Computing Genome Duplication
genome rna-seq duplication written 3.9 years ago by EVR • 570
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Reads with high duplication levels and biased gc content
gc content bias rna-seq duplication written 4.4 years ago by mjg • 20 • updated 4.3 years ago by Biostar ♦♦ 20
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Criteria for identifying tandem and segmental duplicates
genome software alignment blast duplication written 5.0 years ago by kozhaki.seq • 50 • updated 4.7 years ago by Hranjeev • 1.5k
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959
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lineage specific duplication
gene duplication written 5.0 years ago by morteza.mahmoudisaber • 70
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Should quality scores be considered when discriminating between optical and library duplicates?
optical duplicates picard duplication written 5.5 years ago by Dan D ♦ 7.0k • updated 5.5 years ago by mikhail.shugay ♦ 3.4k
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High Duplication Rate of Mapped In RNA-seq
rna-seq duplication written 5.6 years ago by SeqNewbie • 30 • updated 5.6 years ago by Devon Ryan ♦ 94k
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