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Sequence Duplication levels
pcr-enrichment rna-seq multiqc duplication written 10 weeks ago by nageshprabhu.k • 0 • updated 10 weeks ago by genomax ♦ 92k
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"Normal" percent duplication for RRBS reads?
pcr bias duplication rrbs sequencing written 3 months ago by emb13 • 0 • updated 12 weeks ago by Biostar ♦♦ 20
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high sequence duplication ddRAD
duplication ddrad snp sequencing written 4 months ago by gabri.mochales • 50 • updated 4 months ago by geek_y ♦ 11k
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Big difference in estimated duplicate reads between forward and reverse of paired-end RNA-seq
duplication rna-seq fastqc written 12 months ago by Eric Lim • 1.7k • updated 10 months ago by Biostar ♦♦ 20
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Deduplication using UMItools
duplication picard umitools bam rna-seq written 10 months ago by Ati • 30 • updated 10 months ago by Devon Ryan ♦ 97k
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Mapping to duplicated region
mismapping heteroplasmy mitogenome snp duplication written 11 months ago by eadele • 0
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Tracing evolution of duplicated genes
gene evolution duplication written 4.7 years ago by mjoyraj • 80 • updated 13 months ago by Biostar ♦♦ 20
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RNASeq: Normalization of sample with allele specific duplication
duplication rna-seq normalisation allele specific written 13 months ago by Ankit • 150 • updated 13 months ago by h.mon ♦ 31k
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5 follow
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Sequence duplication levels in de-novo assemblies
de-novo fastqc duplication written 14 months ago by yp19 • 60 • updated 14 months ago by predeus • 1.4k
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Number of Tandem and Interspersed duplications
sv cnv duplication written 14 months ago by German.M.Demidov • 1.9k • updated 14 months ago by d-cameron • 2.3k
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Detection of duplicated regions in RNA-seq data
rna-seq duplication written 16 months ago by Ankit • 150 • updated 15 months ago by Biostar ♦♦ 20
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RNASeq analysis, FastQC how to solve warning and fail
rnaseq fastq fastqc ngs duplication written 20 months ago by Kian • 40
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5 follow
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high duplication levels in R1 reads of 10x Genomics samples
10x duplication rna-seq fastqc written 21 months ago by Assa Yeroslaviz • 1.4k • updated 21 months ago by i.sudbery ♦ 9.8k
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How to visualize duplicated segments in a de novo Whole Genome Assembly
wgs visualization duplication written 2.0 years ago by gbdias • 90
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RNA-seq: Should remove duplicates in all samples of same experiment although some do not have technical duplicates?
dupradar rna-seq duplication written 2.4 years ago by salamandra • 330 • updated 2.3 years ago by h.mon ♦ 31k
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Why can a conserved gene be two times in my assembly?
gene assembly duplication conserved sequencing written 2.8 years ago by Kartoffel • 0 • updated 2.8 years ago by Devon Ryan ♦ 97k
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Could high duplication be from ribosomal RNA in RNA-seq samples?
rrna sequencing rna-seq duplication written 4.4 years ago by mmrcksn • 50 • updated 2.9 years ago by Biostar ♦♦ 20
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Gene duplications in Transcriptome
genome trinity duplication transcriptome written 3.4 years ago by Edphid • 0
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calling deletions and duplications in the cancer genomes
genome deletion duplication written 3.9 years ago by Bogdan • 1.1k • updated 3.9 years ago by WouterDeCoster ♦ 44k
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Computing Genome Duplication
genome rna-seq duplication written 4.6 years ago by EVR • 570
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Reads with high duplication levels and biased gc content
gc content bias rna-seq duplication written 5.0 years ago by mjg • 20 • updated 5.0 years ago by Biostar ♦♦ 20
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Criteria for identifying tandem and segmental duplicates
genome software alignment blast duplication written 5.7 years ago by kozhaki.seq • 60 • updated 5.3 years ago by Hranjeev • 1.5k
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lineage specific duplication
gene duplication written 5.7 years ago by morteza.mahmoudisaber • 70
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Should quality scores be considered when discriminating between optical and library duplicates?
optical duplicates picard duplication written 6.1 years ago by Dan D ♦ 7.1k • updated 6.1 years ago by mikhail.shugay ♦ 3.4k
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High Duplication Rate of Mapped In RNA-seq
rna-seq duplication written 6.2 years ago by SeqNewbie • 30 • updated 6.2 years ago by Devon Ryan ♦ 97k
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